prot_Ecto-sp13_S_contig7833.19091.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7833.19091.1
Unique Nameprot_Ecto-sp13_S_contig7833.19091.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length89
Homology
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Match: D7G959_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G959_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 3.040e-45
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 0
Query:    1 MMRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACCTDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQV 83
            MMR FACLAALVGTKVVSSHPLCFFDDR  DYD+VLTFCDNSI +YGACCTDDEEA V  +FSAVTP G ELTGDCSDLYKQV
Sbjct:    1 MMRFFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSITSYGACCTDDEEALVMANFSAVTPEGVELTGDCSDLYKQV 83          
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.900e-40
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    1 MMRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACCTDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQV 83
            MMRAFACLAALVG KVV+SHPLCFFDDRPTDY+EVLTFCD SIAAYGACCTDDEE QV  DFS VTP G ELTGDCS+LYK+V
Sbjct:    1 MMRAFACLAALVGIKVVTSHPLCFFDDRPTDYNEVLTFCDTSIAAYGACCTDDEEVQVMKDFSGVTPEGVELTGDCSNLYKEV 83          
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.010e-39
Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 MMRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACCTDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQV 83
            MMR+FACLAALV T+V +SHPLCF DD+PTDYD+VLTFCDNSIA+ GACCTDDEEAQV VDF+AVTPVGEELTGDC DLYKQV
Sbjct:    1 MMRSFACLAALVATQV-ASHPLCFIDDKPTDYDQVLTFCDNSIASSGACCTDDEEAQVVVDFNAVTPVGEELTGDCPDLYKQV 82          
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Match: A0A6H5K353_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K353_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.010e-29
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0
Query:    2 MRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACCTDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQ 82
            MRA+ACLAAL  TKV ++HPLC+FDDRPTDYD+VLTFCDNSIA  GACCTD+EE QV  +F A    G   + +C+ LYK+
Sbjct:    1 MRAYACLAALAATKV-AAHPLCYFDDRPTDYDQVLTFCDNSIAMSGACCTDEEEGQVEANFDAAFAEGVVPSSECAALYKE 80          
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 4.060e-24
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0
Query:    2 MRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACCTDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQV 83
            MRA+ACLAAL  TKV ++HPLCF DD+PTDYD+VLT+CDNSIA  GACCT++EE  V  +F+A   VG   +  C+ LYKQV
Sbjct:    1 MRAYACLAALAATKV-AAHPLCFIDDKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQV 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7833.19091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G959_ECTSI3.040e-4585.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G961_ECTSI1.900e-4085.54Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
D7G957_ECTSI2.010e-3984.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K353_9PHAE1.010e-2964.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4P3_ECTSI4.060e-2462.20Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..88
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7833contigEcto-sp13_S_contig7833:5612..6067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7833.19091.1mRNA_Ecto-sp13_S_contig7833.19091.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7833 5612..6067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7833.19091.1 ID=prot_Ecto-sp13_S_contig7833.19091.1|Name=mRNA_Ecto-sp13_S_contig7833.19091.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp
MMRAFACLAALVGTKVVSSHPLCFFDDRPTDYDEVLTFCDNSIAAYGACC
TDDEEAQVAVDFSAVTPVGEELTGDCSDLYKQVRVHKI*
back to top