prot_Ecto-sp13_S_contig7828.19082.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7828.19082.1
Unique Nameprot_Ecto-sp13_S_contig7828.19082.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length141
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7828.19082.1 vs. uniprot
Match: D8LES6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LES6_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.070e-43
Identity = 116/141 (82.27%), Postives = 117/141 (82.98%), Query Frame = 0 
Query:    1 GRPVDTTERLCVAIIAACRLRLQVRSLLGLGEDEHTTAARAMCLTIQEAGRTASPVELASRSVRRHPENGPGGAGDGSADSKTSGGGSTGGPRGCSPCRGQXXXXXXXXXXXXXXXXXXXASEAPTTTSSRPGSSRTRTRT 141
            GRPVDTTERLCVAIIAACRLRLQVRSLLGLGEDEHTTAARAMCLTIQEAGRTASPVELASRSVRRHPENG GGAGDGS +SKTSG                XXXXXXXXXXXXXXXXXXX     T TSSRPGSSRTRTRT
Sbjct: 1395 GRPVDTTERLCVAIIAACRLRLQVRSLLGLGEDEHTTAARAMCLTIQEAGRTASPVELASRSVRRHPENGTGGAGDGSGESKTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATSSRPGSSRTRTRT 1535
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7828.19082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LES6_ECTSI5.070e-4382.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7828contigEcto-sp13_S_contig7828:1027..1993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7828.19082.1mRNA_Ecto-sp13_S_contig7828.19082.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7828 1027..1994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7828.19082.1 ID=prot_Ecto-sp13_S_contig7828.19082.1|Name=mRNA_Ecto-sp13_S_contig7828.19082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
GRPVDTTERLCVAIIAACRLRLQVRSLLGLGEDEHTTAARAMCLTIQEAG
RTASPVELASRSVRRHPENGPGGAGDGSADSKTSGGGSTGGPRGCSPCRG
QGGGLNGSSAAPCSGGDSGAASEAPTTTSSRPGSSRTRTRT
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