prot_Ecto-sp13_S_contig78273.19079.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78273.19079.1
Unique Nameprot_Ecto-sp13_S_contig78273.19079.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length34
Homology
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A6H5L776_9PHAE (GT13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L776_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 4.940e-17
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK 34
            PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK
Sbjct:  275 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK 308          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: D7FXV4_ECTSI (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, family GT13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.280e-16
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK 34
            PEAYWDDWLRDPRRRKGRQFIRPEVCRT+HFGQK
Sbjct:  373 PEAYWDDWLRDPRRRKGRQFIRPEVCRTYHFGQK 406          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A7S2XX81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX81_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.170e-11
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQ 33
            P  YWDDW+R+P +RKGR+ IRPE+CRTFHFG+
Sbjct:   93 PRGYWDDWIREPPQRKGRETIRPEICRTFHFGE 125          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A7S1BVZ6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVZ6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 5.770e-11
Identity = 25/33 (75.76%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQ 33
            P  YWDDWLRDP  RKGRQ IRPEVCR++HFG+
Sbjct:   97 PNGYWDDWLRDPDIRKGRQVIRPEVCRSYHFGR 129          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A482SQF6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQF6_9ARCH)

HSP 1 Score: 63.5 bits (153), Expect = 8.610e-11
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFG 32
            P+AYWDDWLR+P +R+ RQFIRPEVCRT H+G
Sbjct:  251 PKAYWDDWLREPAQRQSRQFIRPEVCRTLHYG 282          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A388LUK1_CHABU (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LUK1_CHABU)

HSP 1 Score: 63.5 bits (153), Expect = 8.690e-11
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQ 33
            P AYWDDWLR P+ RKGRQ IRPEVCRT++FG+
Sbjct:  322 PAAYWDDWLRSPQNRKGRQSIRPEVCRTYNFGE 354          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A7S1SHF8_9CHLO (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SHF8_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 1.620e-10
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK 34
            P AYWDDW+R  + RKGRQ IRPEVCRTF+FG+K
Sbjct:  309 PRAYWDDWMRQTQHRKGRQSIRPEVCRTFNFGEK 342          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A7S3XJB6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJB6_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 2.030e-10
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK 34
            P+ YWDDWLR+P +R+GR  +RPE+CRTFHFG K
Sbjct:  190 PKGYWDDWLREPAQRRGRHTLRPEICRTFHFGIK 223          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A5J5BX56_9ASTE (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BX56_9ASTE)

HSP 1 Score: 62.4 bits (150), Expect = 2.220e-10
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQ 33
            P+AYWDDWLR    RKGRQFIRPEVCRT++FG+
Sbjct:  282 PKAYWDDWLRLKENRKGRQFIRPEVCRTYNFGE 314          
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Match: A0A1Q3ALD2_CEPFO (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3ALD2_CEPFO)

HSP 1 Score: 62.4 bits (150), Expect = 2.220e-10
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQ 33
            P+AYWDDWLR    RKGRQFIRPEVCRT++FG+
Sbjct:  282 PKAYWDDWLRLKENRKGRQFIRPEVCRTYNFGE 314          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78273.19079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L776_9PHAE4.940e-17100.00GT13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FXV4_ECTSI1.280e-1697.06Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A7S2XX81_9STRA3.170e-1169.70Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1BVZ6_9STRA5.770e-1175.76Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A482SQF6_9ARCH8.610e-1175.00Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A388LUK1_CHABU8.690e-1175.76Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A7S1SHF8_9CHLO1.620e-1073.53Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A7S3XJB6_HETAK2.030e-1067.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J5BX56_9ASTE2.220e-1075.76Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
A0A1Q3ALD2_CEPFO2.220e-1075.76Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..34
e-value: 2.0E-12
score: 49.1
IPR004139Glycosyl transferase, family 13PFAMPF03071GNT-Icoord: 1..34
e-value: 7.8E-16
score: 57.9
NoneNo IPR availablePANTHERPTHR10468PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASEcoord: 1..34
NoneNo IPR availablePANTHERPTHR10468:SF0ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASEcoord: 1..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78273contigEcto-sp13_S_contig78273:529..630 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78273.19079.1mRNA_Ecto-sp13_S_contig78273.19079.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78273 529..630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78273.19079.1 ID=prot_Ecto-sp13_S_contig78273.19079.1|Name=mRNA_Ecto-sp13_S_contig78273.19079.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp
PEAYWDDWLRDPRRRKGRQFIRPEVCRTFHFGQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR004139Glyco_trans_13