mRNA_Ecto-sp13_S_contig7823.19078.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: D8LT00_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT00_ECTSI) HSP 1 Score: 471 bits (1213), Expect = 2.120e-165 Identity = 287/303 (94.72%), Postives = 288/303 (95.05%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMGGSSRDGRGLLSIPPAA--APPACPSGSPREDATTVPEREP 903
MWSLGVVTY LMSRMLPF+ADTTE IQ NILSGRF FKG AWA ASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPR DS FREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLV HFD NGDGQISFEEFVNGMRRMGGSSRDG GLLSIPPAA APPA SGSPREDATTVPEREP
Sbjct: 33 MWSLGVVTYVLMSRMLPFDADTTEGIQRNILSGRFVFKGGAWAGASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAATPAPPASASGSPREDATTVPEREP 335
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A6H5KC85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC85_9PHAE) HSP 1 Score: 452 bits (1162), Expect = 1.810e-152 Identity = 245/301 (81.40%), Postives = 251/301 (83.39%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMGGSSRDGRGLLSIPPAAAPPACPSGSPREDATTVPEREP 903
MWSLGVVT+FLMSRMLPFNADT+E IQ NIL SAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPR DS FREEVT+SLLSFR+ANPMKQLALEVVARTLDPTQIRQLA+EFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSG IHFNEF DDVTLTTGAAANEEES+VLV HFD NGDGQISFEEFVNGMRRMGGSSRDG GLLSIPPAAAPPA PSGSPR DATTVPEREP
Sbjct: 156 MWSLGVVTHFLMSRMLPFNADTSEGIQRNIL-------WSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRKDSTFREEVTQSLLSFRDANPMKQLALEVVARTLDPTQIRQLADEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGSIHFNEFLAAAIQQRHMDKQSLRPAFDRLDRSHTGFINLDDVTLTTGAAANEEESKVLVGHFDMNGDGQISFEEFVNGMRRMGGSSRDGGGLLSIPPAAAPPASPSGSPRGDATTVPEREP 449
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA) HSP 1 Score: 120 bits (301), Expect = 7.960e-27 Identity = 95/295 (32.20%), Postives = 138/295 (46.78%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPR------TDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWL-----------EANGAARG-------------------MADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGM 777
MWS+GV+ + L+ PF + + I R+ F G AW S K F+ L+K+ R+TA AQ+H WLR + R D + R + F++ N K++A+EV+A LDP + LA EF D + +G +SL EFK + A G+ R + +E+ EA F+++D+DHSG I+F EF XXXXXXXXXXX D+ + GA + E + FDTNGDG+I+F+EF + M
Sbjct: 241 MWSIGVIVFALVGNAFPFFDRDPDILASEIKYARYKFAGPAWDGVSPLCKDFIDRCLVKNPKKRMTAPQAQEHPWLRGGTAWANAIRGKAGGGCDGRMKARTRRCMGEFQDNNLFKKVAMEVIAYILDPEETESLAREFIALDKDGDGVLSLPEFKSVIMRHIGSSRYAQSATGSLRNGGSVHGSDAFKAGAHYAASVTEEEAEAIFSALDIDHSGVINFTEFVAGCLGHRHINETTIRCAXXXXXXXXXXXIELRDMLMYVGADVSAEGMEAALRDFDTNGDGKITFDEFRSAM 535
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.090e-26 Identity = 77/261 (29.50%), Postives = 123/261 (47.13%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRR 783
MWS+GV+ Y L+ PF +T E++ I G + F AW+ S +K+F++ LL+++ R++AA AQ H WL + + DS + ++L++FR+ N +K+LALE+VAR+LD QIR L ++F + D + +G +SL EF L + ++ D+ A F SVD D+ G+ +E + + FD N DG+I F EF MR+
Sbjct: 264 MWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNNHDPSGK----DSKLSKAAVQNLVNFRQTNALKKLALELVARSLDIEQIRNLEKDFAKMDKDGSGTISLEEFDNVLSSQA---NLSKADIRAIFASVDXXXXXXXXXXXXLAATLERRQLDEMRLKLAFDRLDFDHSGTIDATDLRNIVGSDLGQEGIDEIFKEFDLNKDGEIDFGEFKLAMRK 517
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A5D6XJN2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJN2_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.630e-26 Identity = 78/264 (29.55%), Postives = 122/264 (46.21%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMG 789
+WS+GV+TY L+ PF DT EI ++ +GR+ F W S +K + LLL A RLTA A +H WL P T+ + SL F N +K+ AL V+A + T+I +L ++F D + NG +++AE L + G GM +E+V +D+D G + + EF D+ G+ E++++ +++ D NGDG ISF+EF+ M+R G
Sbjct: 123 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWTTVSAEAKDLISRLLLLDAAKRLTADEALRHPWLS-----GSAPSTEIALNSTIFSSLKRFTGNNKLKKAALAVIADQMTETEIVELKKQFMAIDADGNGVITVAELADALRSMG--HGMIEEEVTELLKGIDIDGDGLVDYPEFLAATMKRNLANKEEYLVNAFNYFDTKRQGVITKADLVQFMGS---EDQAQEVIDEVDVNGDGLISFDEFIGMMQRKG 376
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A7S1YZ71_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ71_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.020e-25 Identity = 81/268 (30.22%), Postives = 124/268 (46.27%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMGGSSR 801
+WS+GV+TY L+SR PF + I+ + F G W S ++ FV SL++ RLTA A KH WL +LS R ++V L+ + + K++AL VVA ++ +L FD+ D N+G ++L EFK L + ++EDVEA F++VDVD +G I++ EF ++ G E+ +++ DTN DG+ISF+EF+ G R S R
Sbjct: 26 LWSVGVLTYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLIRYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGNDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 288
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A6S9DGY3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9DGY3_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.210e-25 Identity = 81/268 (30.22%), Postives = 125/268 (46.64%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMGGSSR 801
+WS+GV+TY L+SR PF + I+ + F G W S ++ FV SL++ RLTA A KH WL +LS R ++V L+S+ + K++AL VVA ++ +L FD+ D ++G ++L EFK L + ++EDVEA F++VDVD +G I++ EF ++ G E+ +++ DTN DG+ISF+EF+ G R S R
Sbjct: 258 LWSVGVITYMLLSRQKPFYHRKRRHVIDKIMRCAYDFNGPGWRGISLEAQKFVSSLIVLDPKDRLTADAALKHPWLDRNYNLSDR-RPSQKAMDDVEGRLISYASQSDFKKMALMVVAHKTTSEEVAELRSVFDQYDTGSDGTITLDEFKMAL----SDSNYSEEDVEALFDNVDVDKNGKIYYTEFLAATLEVVGRIEEDRLAEAFDKIDDDDTGYISGKNLKKLLGKDYTPEKVAEIMKEVDTNKDGKISFDEFLRGFREKNVSLR 520
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: T0RBD0_SAPDV (CAMK/CDPK protein kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RBD0_SAPDV) HSP 1 Score: 114 bits (284), Expect = 1.050e-24 Identity = 76/264 (28.79%), Postives = 126/264 (47.73%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DDVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMG 789
+WS+GV+ Y L+ PF D+ EI ++ SG++++ WA S+ +K + LLL +A RLTA A +H WL + P + + + SL F+ N +K++AL V+A + +I +L + F D + NG +++ E + G GM + +V +D+D G + +NEF DD+ G+ EE ++ ++ D+NGDGQISFEEFV+ M++ G
Sbjct: 276 LWSIGVIMYILLCGYPPFYGDSDPEIFASVRSGKYSYDTPEWAGVSKEAKDLIDHLLLLNASKRLTAEQALQHPWL-----MGAAPAVERSLNTNIMTSLKRFQGHNKLKKVALGVIADQMTGAEINELKKTFAMIDADGNGVITMQELGAAVRDMG--HGMLESEVLQLLQGLDIDGDGNLDYNEFLAATMKRNDFNKEEYLVNAFNYFDTKKQGVITKDDLIRFMGS---EEHAQEVMSEIDSNGDGQISFEEFVSMMQKRG 529
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: A0A7S1XPH9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPH9_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.740e-24 Identity = 70/187 (37.43%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEF 561
MWS+GV+ Y L+S PF + + + GR++F + S+ +K F+R LL+ R+TA AQKH WL E D P + EV +L F+E + ++LA EV+A TL P QI L EF + D GE+SLAE ++ LE + M +E + F S+++DHSG IH+ EF
Sbjct: 15 MWSIGVIAYMLVSGRPPFMGNDERDTLALVKRGRYSFPPYIFDHISDNAKDFIRQLLVLDPAARMTAEQAQKHPWLHEW-DHEPEP-----LKLEVVDNLKHFQELSAFQKLAHEVIAFTLQPAQIGDLRSEFHKFDVEGTGEISLAEMRQVLEQSAH---MPNEVCDKIFESLNMDHSGKIHWIEF 192
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Match: M4BN88_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN88_HYAAE) HSP 1 Score: 112 bits (280), Expect = 6.110e-24 Identity = 82/278 (29.50%), Postives = 122/278 (43.88%), Query Frame = 1
Query: 1 MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKHFVRSLLLKSADLRLTAAGAQKHDWLREAEDLSQTPRTDSNFREEVTRSLLSFREANPMKQLALEVVARTLDPTQIRQLAEEFDRADNNNNGEVSLAEFKRWLEANGAARGMADEDVEASFNSVDVDHSGFIHFNEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-DVTLTTGAAANEEESRVLVEHFDTNGDGQISFEEFVNGMRRMG---GSSRDGRGLLS 822
+WS+GV+TY L+ PF DT EI ++ +GR+ F W S +K + LLL A RLTA +H W+ PR+ + SL F N +K+ AL V+A +I +L +F D + NG ++++E L G GM +E+V +D+D G + + EF D+ G+ EE+++ +++ D+NGDG ISFEEFV M R G S D G LS
Sbjct: 1021 LWSIGVITYILLCGYPPFYGDTDPEIFASVRAGRYDFDSPEWTNVSGDAKDLISRLLLVDASKRLTAEEVLRHPWIS-----GSAPRSSMTLNPNIFSSLKRFTGNNKLKKAALGVIADLATEGEIAELKNQFMAIDTDGNGVITVSELAEALHDTGL--GMIEEEVLELVKGIDIDGDGLVDYPEFLAATMKRNLSNQKEHLMNAFNYFDTTNTGHITKADLVQFMGS---EEQAQEVIDDVDSNGDGVISFEEFVAMMDRKGYGDDSMDDNGGFLS 1288 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7823.19078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7823.19078.1 >prot_Ecto-sp13_S_contig7823.19078.1 ID=prot_Ecto-sp13_S_contig7823.19078.1|Name=mRNA_Ecto-sp13_S_contig7823.19078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp MWSLGVVTYFLMSRMLPFNADTTEEIQCNILSGRFAFKGSAWARASEASKback to top mRNA from alignment at Ecto-sp13_S_contig7823:4441..7125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7823.19078.1 ID=mRNA_Ecto-sp13_S_contig7823.19078.1|Name=mRNA_Ecto-sp13_S_contig7823.19078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2685bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7823:4441..7125- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7823:4441..7125- >mRNA_Ecto-sp13_S_contig7823.19078.1 ID=mRNA_Ecto-sp13_S_contig7823.19078.1|Name=mRNA_Ecto-sp13_S_contig7823.19078.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7823:4441..7125- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |