prot_Ecto-sp13_S_contig78212.19075.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78212.19075.1
Unique Nameprot_Ecto-sp13_S_contig78212.19075.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length142
Homology
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A6H5KS36_9PHAE (Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS36_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 6.520e-83
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0
Query:    1 DFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSVDSPWQV 142
            DFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLD+LR VPPRALESQDPADAWAA+GVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALG+HWTVCEGTLIAVVGAKVLPDKG  GGNAPQRLAFSVDSPWQV
Sbjct:   94 DFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDSLRTVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGDGGNAPQRLAFSVDSPWQV 235          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: D8LM23_ECTSI (Protein MCM10 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM23_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 3.230e-74
Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0
Query:   21 MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSVDSPWQV 142
            MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAA+GVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALG+HWTVCEGTLIAVVGAKVLPDKG GGGNAPQRLAFSVDSPWQV
Sbjct:    1 MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQV 122          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A835YRW3_9STRA (Protein MCM10 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 5.590e-21
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMR-GRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSVDSPWQV 142
            E  SG+RV    L  E     +R G K  +LD L ++  +ALES DP  AWA +GVLV KS +R  ++G  F  W LS L+    E +L L ++AL +HW++CEG+++ ++GA  LP +       P  L F+ D+ WQV
Sbjct:    2 ERLSGIRVNKPTLVDEPSLEALRQGYKFFKLDTLPSIARQALESTDPMHAWATVGVLVRKSQQRDTSSGKPFVKWGLSGLAAGSKESTLLLSKDALSSHWSICEGSVLMLLGAHALPKQEQSSAGDP--LVFAADASWQV 139          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A1X7VR66_AMPQE (Protein MCM10 homolog n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VR66_AMPQE)

HSP 1 Score: 90.1 bits (222), Expect = 2.940e-18
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    3 TEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKV 117
            TE F+GLR++N L+S+E M+ RM GRK+ R+  +   P    E  D A  W   GVLV+K P +    G  FSVW LSDLS + + VSLFLF +A   HW    GT++A++  K+
Sbjct:  126 TERFTGLRIKNPLVSSELMKERMSGRKMIRIPQI--YPNIKKEDFDIAGDWVTGGVLVNKLPPKNTTKGSKFSVWKLSDLSSQNDVVSLFLFDKAFDVHWKTPIGTVVAILNPKI 238          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A485LLY3_9STRA (Aste57867_23134 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.730e-15
Identity = 54/133 (40.60%), Postives = 76/133 (57.14%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSV 136
            E+FS LR+++RL+SA++MR +M GRK   L AL   P R LESQD  D W  I V+  K+  +  A    + VWTLSDL      +S+FL+  A   HW   EG+++A++   V+P K  G  +    L F V
Sbjct:  137 ESFSSLRIKDRLVSADEMRDQMEGRKFIPLSALEKTPMRELESQD-VD-WVTIAVVSKKTMGK--AEHSPYVVWTLSDLDNAM--ISVFLYGGAYDDHWKELEGSIVALINPMVMPAKEKGKFSLRVTLGFHV 263          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A2D4CFQ3_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFQ3_PYTIN)

HSP 1 Score: 79.0 bits (193), Expect = 1.720e-14
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSVDSPWQV 142
            E FSGLR+  R +SA+++   M GR+  RL  + ++P   L   D    W  IGV+  K+  +  +NG +F VW LSDL     E+ +FLF  A  +HW   EG+++A++ A V+P       +   R A     P +V
Sbjct:   73 ERFSGLRIAERTISADELAGEMTGRRFIRLREMDSIPRDVLT--DEKTDWVTIGVVARKTLSKATSNGSTFMVWGLSDLDT--TELGVFLFDAAYESHWRELEGSIVAILNATVMP------ASEKNRFALKASRPEEV 201          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A4W3J4D2_CALMI (Protein MCM10 homolog n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J4D2_CALMI)

HSP 1 Score: 79.0 bits (193), Expect = 2.290e-14
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRA-VPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVL-PDKGSGGGNAPQRLAFSVDSPWQV 142
            + FSGLR+RN L+S+ +M  +M+ RK+ RL  LR+ +    LE+ D    W   GV+  K+  + ++NG +FS+W L+DL      +SLFLF      HW    GT+I ++ A  + P +GS      + +  SVD P ++
Sbjct:   42 DRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGS------EEVCLSVDHPQKI 172          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: V9KEH6_CALMI (Protein MCM10 homolog (Fragment) n=3 Tax=Callorhinchus milii TaxID=7868 RepID=V9KEH6_CALMI)

HSP 1 Score: 79.0 bits (193), Expect = 2.370e-14
Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRA-VPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVL-PDKGSGGGNAPQRLAFSVDSPWQV 142
            + FSGLR+RN L+S+ +M  +M+ RK+ RL  LR+ +    LE+ D    W   GV+  K+  + ++NG +FS+W L+DL      +SLFLF      HW    GT+I ++ A  + P +GS      + +  SVD P ++
Sbjct:  228 DRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGS------EEVCLSVDHPQKI 358          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A662WYA4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYA4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.550e-14
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLP 119
            E +SGLR+ +R +SA+++R  M GRK  +L  +  VP     +      W  IGVL+ K+  +  ANG +F VW LSDL+    E+ +FLF +A   HW    G+++A++ A +LP
Sbjct:   72 ETYSGLRISDRTVSAQELRDEMEGRKYIQLGQMDLVPKDTFTNGT--TDWLTIGVLIRKTLSKPTANGSTFMVWGLSDLTG--TELGVFLFDDAYAAHWKELTGSVVALMNAALLP 183          
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Match: A0A662XXR7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXR7_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.660e-14
Identity = 44/116 (37.93%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    4 EAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGTHWTVCEGTLIAVVGAKVLP 119
            E +SGLR+ +R +SA+++R  M GRK   L  +  + P+   +    D W  IGVL+ K+  +  ANG +F VW LSDL+    E+ +FLF +A   HW    G+++A++ A +LP
Sbjct:  105 ETYSGLRISDRTVSAQELRDEMEGRKYIHLGQM-DLAPKDTFTNGTTD-WVTIGVLIRKTLSKPTANGSTFMVWGLSDLNG--TELGVFLFDDAYAAHWKELVGSVVALMNAALLP 216          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78212.19075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS36_9PHAE6.520e-8395.77Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LM23_ECTSI3.230e-7497.54Protein MCM10 homolog n=1 Tax=Ectocarpus siliculos... [more]
A0A835YRW3_9STRA5.590e-2140.00Protein MCM10 homolog n=1 Tax=Tribonema minus TaxI... [more]
A0A1X7VR66_AMPQE2.940e-1844.35Protein MCM10 homolog n=1 Tax=Amphimedon queenslan... [more]
A0A485LLY3_9STRA4.730e-1540.60Aste57867_23134 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4CFQ3_PYTIN1.720e-1434.53Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A4W3J4D2_CALMI2.290e-1435.46Protein MCM10 homolog n=1 Tax=Callorhinchus milii ... [more]
V9KEH6_CALMI2.370e-1435.46Protein MCM10 homolog (Fragment) n=3 Tax=Callorhin... [more]
A0A662WYA4_9STRA3.550e-1437.93Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662XXR7_9STRA8.660e-1437.93Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..142
e-value: 4.7E-30
score: 106.4
IPR040184Minichromosome maintenance protein 10PANTHERPTHR13454FAMILY NOT NAMEDcoord: 3..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78212contigEcto-sp13_S_contig78212:57..482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78212.19075.1mRNA_Ecto-sp13_S_contig78212.19075.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78212 57..482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78212.19075.1 ID=prot_Ecto-sp13_S_contig78212.19075.1|Name=mRNA_Ecto-sp13_S_contig78212.19075.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=142bp
DFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDALRAVPPRALESQDPA
DAWAAIGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGT
HWTVCEGTLIAVVGAKVLPDKGSGGGNAPQRLAFSVDSPWQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040184Mcm10