prot_Ecto-sp13_S_contig78177.19070.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78177.19070.1
Unique Nameprot_Ecto-sp13_S_contig78177.19070.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length166
Homology
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BLAST of mRNA_Ecto-sp13_S_contig78177.19070.1 vs. uniprot
Match: A0A2A4Z475_9PROT (Autotransporter domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2A4Z475_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 2.020e-6
Identity = 59/159 (37.11%), Postives = 87/159 (54.72%), Query Frame = 0 
Query:   16 DADVTAWNIGVS----PASTGQVAFTGDG-VDLSNDSVNFLVSGSLAGVA---TLEDVFAGNMAAITTGATVTDNSFLYDFSLVDDTNNVDVAVTVANTIADTVENPGFAEAGEILLTGALSGSSDPEIILLQSAIGSQSTQEGASKAIEAVTSPNIDG 166
            DAD  A+ +GV       S+ Q+  +  G VD SNDS+   + GSL+      T+  V  GN  A T     +DNS++YDF L  + +NVD+ VTV NTI D + +     A    L   L+GS    I  +QS +G+ ST+E  ++A+E+V  P++DG
Sbjct:  245 DADSAAYTLGVKRTAGSTSSAQITISSGGPVDFSNDSLTIDI-GSLSQALVNETISSVIIGNGGA-TVIPNFSDNSYMYDFVLQQNGDNVDLIVTV-NTI-DELASSSSNRAVVRFLFDDLAGSEVAAINQIQSILGNISTREAFNEALESVL-PDLDG 398
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78177.19070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2A4Z475_9PROT2.020e-637.11Autotransporter domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78177contigEcto-sp13_S_contig78177:3..500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78177.19070.1mRNA_Ecto-sp13_S_contig78177.19070.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78177 3..500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78177.19070.1 ID=prot_Ecto-sp13_S_contig78177.19070.1|Name=mRNA_Ecto-sp13_S_contig78177.19070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=166bp
VTLGDDVTVTAATQTDADVTAWNIGVSPASTGQVAFTGDGVDLSNDSVNF
LVSGSLAGVATLEDVFAGNMAAITTGATVTDNSFLYDFSLVDDTNNVDVA
VTVANTIADTVENPGFAEAGEILLTGALSGSSDPEIILLQSAIGSQSTQE
GASKAIEAVTSPNIDG
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