prot_Ecto-sp13_S_contig781.19065.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig781.19065.1
Unique Nameprot_Ecto-sp13_S_contig781.19065.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length171
Homology
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BLAST of mRNA_Ecto-sp13_S_contig781.19065.1 vs. uniprot
Match: D8LKG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG6_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.840e-72
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 
Query:    1 MGCGPVTVLVRSAGLRGAFLTAVAFQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGALAAAVGVAF 127
            MGCGPVT+LVRSAGLRGAFLTAV FQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGA+AAAVGVAF
Sbjct:  339 MGCGPVTLLVRSAGLRGAFLTAVVFQATCLLIAAFLRPGPAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGAIAAAVGVAF 465
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BLAST of mRNA_Ecto-sp13_S_contig781.19065.1 vs. uniprot
Match: A0A7S2UUK4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUK4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.920e-11
Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 0 
Query:    1 MGCGPVTVLVRSAG-LRGAFLTAVAFQATCLLIAAFLRPG-----PAAPALSLVLLAALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVHPIVKHSEDGDASVLLAGALAAAVGV 125
            +G GP+  +++  G L  A   +V  QA    +  FL P      P+A AL LV L  LG+P AL  ++PY+MV   S    HG LLG+LNV++VLA+L +TL VHPI           +L G +  A G+
Sbjct:  222 LGAGPLERMIKGVGGLVPALGWSVRSQAALTCMVLFLPPVTRLALPSAKALVLVQLGLLGLPFALIHTVPYVMVAKSSGPSQHGHLLGRLNVYVVLAELFITLTVHPISSIFPGNTLVEILLGIVVTASGL 352
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig781.19065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKG6_ECTSI1.840e-7297.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UUK4_9STRA2.920e-1138.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 84..103
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 113..132
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 8..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig781contigEcto-sp13_S_contig781:18379..20484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig781.19065.1mRNA_Ecto-sp13_S_contig781.19065.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig781 18044..21428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig781.19065.1 ID=prot_Ecto-sp13_S_contig781.19065.1|Name=mRNA_Ecto-sp13_S_contig781.19065.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=171bp
MGCGPVTVLVRSAGLRGAFLTAVAFQATCLLIAAFLRPGPAAPALSLVLL
AALGVPLALAESLPYMMVGMFSPRETHGQLLGKLNVWIVLAQLALTLCVH
PIVKHSEDGDASVLLAGALAAAVGVAFVPAIGREEPVLAPPAQRLSSPSA
ACGALDECVSSPRRVLLERE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf