mRNA_Ecto-sp13_S_contig7808.19061.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7808.19061.1
Unique NamemRNA_Ecto-sp13_S_contig7808.19061.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A6H5L335_9PHAE (HECT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L335_9PHAE)

HSP 1 Score: 699 bits (1805), Expect = 5.830e-248
Identity = 345/347 (99.42%), Postives = 347/347 (100.00%), Query Frame = 1
Query:    1 STLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            STLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFK+KVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAE+DVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK
Sbjct:  328 STLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKDKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAEIDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 674          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A6V1P524_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P524_HETAK)

HSP 1 Score: 468 bits (1204), Expect = 3.310e-161
Identity = 221/342 (64.62%), Postives = 279/342 (81.58%), Query Frame = 1
Query:   16 SSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            S F  + SA+VR+L++   R + L LVRA++A ++A VPE ++ FQ L+R +   F++K +WF  QC +LRVPWD+EHQHLK+RR+NLLEDSM A  +V +E  RQ FRFEF+GEPG+DAGGVAREWFHLVSE +FNPDFALF Y +++QMC QIS +S V  E HLQ+FHF GRLLGKALFDGQLVQAHLVRP+YKHLLGWP+ FSDLE VDH T+  L++M ELDDV VCC+DFTVTE+R G+ E +DLK GGA++DVTNDN+GEY+E +L++RL  R++ QLTA L GFY+V+PE LLSVFDFQELELL+CGLP IDL DW+R+T+Y GE+ER+  NH+
Sbjct:   32 SKFDPQESAYVRQLTR-GERGYELRLVRAQDAVMEARVPETHVGFQDLTRVNAQTFEQKSEWFRNQCSILRVPWDIEHQHLKVRRSNLLEDSMTAFRAVPAEKCRQIFRFEFIGEPGIDAGGVAREWFHLVSEQLFNPDFALFAYGAVDQMCCQISPHS-VLVEDHLQYFHFAGRLLGKALFDGQLVQAHLVRPIYKHLLGWPLLFSDLEQVDHETYNGLLQMLELDDVSVCCVDFTVTEERFGAAETIDLKPGGADIDVTNDNVGEYLEALLRYRLCGRVQAQLTALLAGFYEVVPEPLLSVFDFQELELLLCGLPTIDLDDWRRHTEYVGEYERRKANHQ 371          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A836CEL7_9STRA (Ubiquitin protein ligase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL7_9STRA)

HSP 1 Score: 476 bits (1226), Expect = 3.780e-161
Identity = 228/347 (65.71%), Postives = 282/347 (81.27%), Query Frame = 1
Query:   13 GSSFRIEGSAFVRKLSKL----RPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            GS+F + GSAFVR++ K     RP   M++LVRAEE  LDA+VPE ++ FQHLS+ S  PF++K+ WF  QCD LRVPW+ EHQHL++RR  LLEDS+ A+ES+R   MR+RFRFEF+GEPGVDAGGVAREWF LVSE +FNPDFALFQYSSINQMCMQ++ +SGVAN++HL  FHF GRLL KALFD QLV AHLVRPLYKHLL WPIAFSDLEHVD F H+SL+KM +++DV +C +DFTV+E+RLG    V+L   G ++ VTN+N+GEY+ELVLKHR++ R+  QL  FL GFY+VIPEALL++FDFQELELLMCGLP I+L DW+++T+YTGE E K  +HK
Sbjct:  272 GSTFNVAGSAFVRRIGKDPETGRP---MVDLVRAEEVALDAAVPEISVNFQHLSKMSSRPFQQKLAWFRTQCDGLRVPWEREHQHLRLRREVLLEDSLRAIESIRPAQMRERFRFEFIGEPGVDAGGVAREWFQLVSEQLFNPDFALFQYSSINQMCMQVNPSSGVANDEHLDFFHFAGRLLAKALFDAQLVSAHLVRPLYKHLLAWPIAFSDLEHVDKFRHDSLLKMVDMEDVSICGVDFTVSEERLGENTTVELVPDGEQISVTNENLGEYMELVLKHRMVGRIEQQLLHFLQGFYEVIPEALLTIFDFQELELLMCGLPTIELDDWKQHTEYTGELESKGASHK 615          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: F0YLG4_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLG4_AURAN)

HSP 1 Score: 416 bits (1068), Expect = 6.320e-140
Identity = 204/347 (58.79%), Postives = 262/347 (75.50%), Query Frame = 1
Query:   31 EGSAFVRKLSKL-------RPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            E +AFVR+L  L       +  H  L+LV A++A L   VP  N      Q LSR + +PF+ K  WF +Q   L+VPW+  H  + +RR NLLEDSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS+ +FNPDFAL+ YSSINQMCMQI+ +SG+AN++HL++FHF GRLLGKALFD Q+V  HLVRPLYKH+LGWP+  +DLE +D  T+ +L K+ +LDDVEVCCLDFTVTED  G+ + VDLK  GA   VTN+N+ EY++L +++RLL R+++Q+ A L+GFYDV+PEALLSVFDFQELELL+CGLP ID+ DW+RNT+YTG++ERK  +HK
Sbjct:   73 ERTAFVRELRTLTVGTSTSKATH-SLQLVPAKDAALSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEVCCLDFTVTEDHWGTAQTVDLKPDGANCTVTNNNVDEYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASHK 418          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: F0YHF6_AURAN (HECT domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHF6_AURAN)

HSP 1 Score: 413 bits (1061), Expect = 6.580e-136
Identity = 202/347 (58.21%), Postives = 261/347 (75.22%), Query Frame = 1
Query:   31 EGSAFVRKLSKL-------RPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            E +AFVR+L  L       +  H  L+LV A++A L   VP  N      Q LSR + +PF+ K  WF +Q   L+VPW+  H  + +RR NLLEDSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS+ +FNPDFAL+ YSSINQMCMQI+ +SG+AN++HL++FHF GRLLGKALFD Q+V  HLVRPLYKH+LGWP+  +DLE +D  T+ +L K+ +LDDVEVCCLDFTVTED  G+ + V+LK  GA   VTN N+ +Y++L +++RLL R+++Q+ A L+GFYDV+PEALLSVFDFQELELL+CGLP ID+ DW+RNT+YTG++ERK  +HK
Sbjct:  302 EQTAFVRELRTLTVGTSTSKATH-SLQLVPAKDAALSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKLQVPWEDGHIKINVRRENLLEDSMEATESITQADMRKIFRFEFIAEPGVDAGGVAREWFQLVSDMLFNPDFALWSYSSINQMCMQINPSSGIANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPLTVADLEQLDADTYANLCKLKDLDDVEVCCLDFTVTEDHWGTAQTVELKSDGANCTVTNSNVDDYIQLQMRYRLLDRVKEQVKALLIGFYDVVPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGSSHK 647          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A7S3JWL0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWL0_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 9.550e-135
Identity = 200/359 (55.71%), Postives = 262/359 (72.98%), Query Frame = 1
Query:   10 AGSSFRIEGSAFVRKLSKLRPR------------HFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            +   +  E  AFVR+L K+ P             H +++LVRAE+A L   VP  N      Q LSR + +PF +K  WF +Q   ++VPW+  H  + IRR NLLEDSM A+ES+    M++ FRFEF+GEPGVDAGGVAREWF LVS+ +FNPDFAL+ YSSINQM MQ++ +SG+AN++HL++FHF GRLLGKALFD Q+V  HLVRPLYKH+LGWP+   DLE +DH TH +L+K+ +L+DVE+ CLDFTVTED  G+   ++LK  GA   VTN N+ EY++L +++RLL R++ Q+ A L GFYDV+PEALLSVFDFQELELL+CGLP ID+ DW+ NT+YTG++ERK  +HK
Sbjct:  338 SNQGWTFEKIAFVREL-KIDPNKKDDQNAIKKNEHMIIDLVRAEDAALSTVVPAINNGTSLAQELSRYAAMPFHQKEAWFRQQIAKVQVPWEEGHIKINIRRENLLEDSMEAVESIAQNEMKKIFRFEFIGEPGVDAGGVAREWFQLVSDILFNPDFALWSYSSINQMNMQVNPSSGIANDEHLRYFHFTGRLLGKALFDRQIVSGHLVRPLYKHILGWPLMIDDLEQLDHDTHANLLKLKDLEDVELLCLDFTVTEDHWGTANTIELKPDGANCPVTNSNVDEYIQLQMRYRLLDRIKQQVKALLTGFYDVVPEALLSVFDFQELELLLCGLPEIDMDDWKNNTEYTGDYERKGASHK 695          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A6S8T4N2_9STRA (Hypothetical protein n=12 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8T4N2_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 2.600e-134
Identity = 203/351 (57.83%), Postives = 263/351 (74.93%), Query Frame = 1
Query:   19 SFRIEGSAFVRKL-------SKLRPRHFMLELVRAEEATLDASVPEAN---LTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            ++  E  AFVR+L       SK +  H  L+LV A+EA+L   VP  N      Q LSR + +PF+ K  WF +Q   ++VPW+  H  + +RR NLL+DSM A ES+    MR+ FRFEF+ EPGVDAGGVAREWF LVS  +FNPDFAL+ YSSINQMCMQI+ +SGVAN++HL++FHF GRLLGKALFD Q+V  HLVRPLYKH+LGWP+  +DLE +D  T+ +L K+ +L+DVEVCCLDFTVTED  G+ + ++LK  GA   VTN N+ EY++L +++RLL R+++Q+ A LVGFYDVIPEALLSVFDFQELELL+CGLP ID+ DW+RNT+YTG++ERK  ++K
Sbjct:  281 TWAFERIAFVRELRSSATVSSKSKVDH-SLQLVPAKEASLSTVVPAINNGTSLAQELSRYAAMPFQHKEAWFRQQIAKIQVPWEDGHIKINVRRENLLQDSMEATESITQGDMRKIFRFEFISEPGVDAGGVAREWFQLVSALLFNPDFALWSYSSINQMCMQINPSSGVANDEHLRYFHFTGRLLGKALFDRQIVAGHLVRPLYKHILGWPVTVADLEQLDADTYANLCKLKDLEDVEVCCLDFTVTEDHWGTAQTIELKSDGANCMVTNRNVDEYIQLQMRYRLLERVKEQIKALLVGFYDVIPEALLSVFDFQELELLLCGLPEIDIEDWKRNTEYTGDYERKGASNK 630          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A7S2B6P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6P4_9STRA)

HSP 1 Score: 387 bits (994), Expect = 3.400e-126
Identity = 188/339 (55.46%), Postives = 248/339 (73.16%), Query Frame = 1
Query:   25 RIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            RI+  AFVR+L         + L+ AE +T+   V   +L  Q L+R     F++K  WF  Q    +VPWD  H  + +RR++LL DSM A+ES+R + MR+ FRFEF  EPGVDAGGVAREW+HLVS+ +FNPD ALF YS+INQMCMQI+  SG+ NE+HL++FHF GRLLGKALFD Q+V +HLV PLYKH+L WP+  +DLE +D   +++L+KM ++DD+E+ CLDFTVTE+++G    VDLKE G  + +TNDN+ EY+ L  K+RLL R+++Q+   L+GFYDV+PE LLSVFDFQELELL+CGLP ID  DW R ++YTG+FERK  NHK
Sbjct:  282 RIDDIAFVRELKMNEGSMGSIRLIPAENSTMSTLVNGRSLA-QDLARNVTASFEDKEQWFRAQIAQQQVPWDEGHIRVHVRRSHLLMDSMEAIESIRKDDMRKIFRFEFQNEPGVDAGGVAREWYHLVSDELFNPDVALFTYSAINQMCMQINPMSGLCNEEHLRYFHFCGRLLGKALFDRQIVSSHLVLPLYKHILSWPLLMTDLESLDADVYQNLLKMLDIDDLEMLCLDFTVTENQMGEARQVDLKENGVNITLTNDNMQEYIRLQCKYRLLDRVKEQVKHLLMGFYDVVPEPLLSVFDFQELELLLCGLPEIDTEDWIRQSEYTGDFERKGANHK 619          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A6U1B9V6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B9V6_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.900e-116
Identity = 177/340 (52.06%), Postives = 247/340 (72.65%), Query Frame = 1
Query:   28 IEGSAFVRKL--SKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            ++  AFVR++  S      + + LV A++A     V   +L  Q L+R    PF+ K +WF  Q   L+VPW+  H  + +RR++LL D+M A+ SV+ E +R+ FRFEF  EPG+DAGGVAREW+ LVSE +FNPDFALF +S+INQMCMQ++  SG+ NE+HL++F F GRLLGKALFD Q+V   LV PLYKH+LGWP+  SDLE +D   +++L+K+ ++DDV    LDFTVTE+ +G +   DLK GGA+  VTN+N+GEY+EL  ++R+L R+R+Q+   L+GFY+V+ E LLSVFDFQELE+L+CGLP ID++DW  N++YTGE+ER+  +HK
Sbjct:  311 VDDIAFVREIKQSSSATGGYDMMLVAAQDAAASTLVNGRSLA-QDLARHVTAPFQTKENWFRHQLTQLQVPWEEGHIRINVRRSHLLVDAMEALMSVKKEDLRKIFRFEFQHEPGIDAGGVAREWYQLVSEALFNPDFALFSFSAINQMCMQVNPISGLCNEEHLRYFQFCGRLLGKALFDRQIVAGRLVVPLYKHILGWPLLMSDLEQLDADVYQNLLKLGDMDDVSCLDLDFTVTENAMGGIREEDLKPGGADCLVTNENLGEYLELQCQYRILDRVREQVKHILIGFYEVVEEPLLSVFDFQELEMLLCGLPEIDVSDWIANSEYTGEYERRGSSHK 649          
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Match: A0A7S1XME4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XME4_9STRA)

HSP 1 Score: 348 bits (893), Expect = 1.610e-114
Identity = 171/336 (50.89%), Postives = 231/336 (68.75%), Query Frame = 1
Query:   43 FVRKL---SKLRPRHFMLELVRAEEATLDASVPEANLTFQHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAAMESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQYSSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPLYKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGSMEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDVIPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK 1041
            FVR     S+ + R   L++VRAEEA     VP   +TFQ LSRA+ + F +KV WF      LRVPW+  H  +++RR++LL D+  A  ++ ++  R+ FRFEF+GEP +DAGGVARE++ +VS  +F+ +  LF  S+INQ CMQI+  SG+ANE HL  F F GRL+GKALFD  LV AHLVRPLYKH+L WP+   DLEH+D+ T+  ++K  ++DDV + CLDFT  E+RLGS E V L   G  + +TN+N+  Y+E  + +R+  R ++QL A L GFYDVIP +LLSVFDFQELE+LMCGLP ID+ DW+ +T Y G++E K   HK
Sbjct:    8 FVRNFRGDSESKYRELDLQMVRAEEARQSGEVPGTLITFQDLSRAADMKFPDKVTWFQDVVRGLRVPWEDGHMAIRVRRSDLLHDAQEAYLAMEADEFRKYFRFEFIGEPAIDAGGVAREFYEIVSSQLFDANNGLFMSSAINQTCMQINPASGLANESHLDFFRFAGRLMGKALFDNHLVNAHLVRPLYKHILAWPMNLHDLEHLDYDTYNGIMKTLDMDDVSILCLDFTCEEERLGSHETVSLVPNGGNVSLTNENMRLYLERQICYRVAERTKEQLCALLQGFYDVIPGSLLSVFDFQELEILMCGLPEIDMADWKAHTVYEGQYEAKGAQHK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7808.19061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L335_9PHAE5.830e-24899.42HECT domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6V1P524_HETAK3.310e-16164.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CEL7_9STRA3.780e-16165.71Ubiquitin protein ligase (Fragment) n=1 Tax=Tribon... [more]
F0YLG4_AURAN6.320e-14058.79HECT domain-containing protein n=1 Tax=Aureococcus... [more]
F0YHF6_AURAN6.580e-13658.21HECT domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S3JWL0_9STRA9.550e-13555.71Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6S8T4N2_9STRA2.600e-13457.83Hypothetical protein n=12 Tax=Pelagomonas calceola... [more]
A0A7S2B6P4_9STRA3.400e-12655.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U1B9V6_9STRA3.900e-11652.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XME4_9STRA1.610e-11450.89Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7808contigEcto-sp13_S_contig7808:1448..5728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score696.4
Seed ortholog evalue6.6e-198
Seed eggNOG ortholog2880.D7FM40
Model size1043
KEGG koko:K04678,ko:K10591,ko:K10592
KEGG Pathwayko04011,ko04120,ko04144,ko04340,ko04341,ko04350,ko04530,ko05169,map04011,map04120,map04144,map04340,map04341,map04350,map04530,map05169
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0940@2759
Ec32 ortholog descriptionHECT
Ec32 orthologEc-01_010570.1
EC2.3.2.26
Cds size1041
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04121,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7808.19061.1prot_Ecto-sp13_S_contig7808.19061.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7808 1448..5728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464051.4160464-CDS-Ecto-sp13_S_contig7808:1447..17831681464051.4160464-CDS-Ecto-sp13_S_contig7808:1447..1783Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 1448..1783 -
1681464051.4393802-CDS-Ecto-sp13_S_contig7808:2298..24641681464051.4393802-CDS-Ecto-sp13_S_contig7808:2298..2464Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 2299..2464 -
1681464051.4480207-CDS-Ecto-sp13_S_contig7808:2966..30891681464051.4480207-CDS-Ecto-sp13_S_contig7808:2966..3089Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 2967..3089 -
1681464051.4579632-CDS-Ecto-sp13_S_contig7808:4449..46041681464051.4579632-CDS-Ecto-sp13_S_contig7808:4449..4604Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 4450..4604 -
1681464051.4680696-CDS-Ecto-sp13_S_contig7808:4984..51521681464051.4680696-CDS-Ecto-sp13_S_contig7808:4984..5152Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 4985..5152 -
1681464051.4866695-CDS-Ecto-sp13_S_contig7808:5635..57281681464051.4866695-CDS-Ecto-sp13_S_contig7808:5635..5728Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7808 5636..5728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7808.19061.1

>prot_Ecto-sp13_S_contig7808.19061.1 ID=prot_Ecto-sp13_S_contig7808.19061.1|Name=mRNA_Ecto-sp13_S_contig7808.19061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
STLAGSSFRIEGSAFVRKLSKLRPRHFMLELVRAEEATLDASVPEANLTF
QHLSRASQLPFKEKVDWFNKQCDLLRVPWDVEHQHLKIRRNNLLEDSMAA
MESVRSESMRQRFRFEFLGEPGVDAGGVAREWFHLVSEGVFNPDFALFQY
SSINQMCMQISANSGVANEQHLQHFHFVGRLLGKALFDGQLVQAHLVRPL
YKHLLGWPIAFSDLEHVDHFTHESLIKMTELDDVEVCCLDFTVTEDRLGS
MEVVDLKEGGAELDVTNDNIGEYVELVLKHRLLMRMRDQLTAFLVGFYDV
IPEALLSVFDFQELELLMCGLPHIDLTDWQRNTDYTGEFERKAGNHK
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mRNA from alignment at Ecto-sp13_S_contig7808:1448..5728-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7808.19061.1 ID=mRNA_Ecto-sp13_S_contig7808.19061.1|Name=mRNA_Ecto-sp13_S_contig7808.19061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7808:1448..5728- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGACGCTGGCGGGATCGAGCTTCCGCATCGAAGGCAGCGCGTTCGTTCG CAAACTCTCCAAGCTGAGGCCTCGGCACTTCATGCTTGAGCTGGTGAGCG TTTTGTTTTCTTTCTGTTCTTTCAGTGAGTATACATGACACCATTTAGCG AGAAAGTGACCGTGGAGTTGGGTGGAGAGTCGTACCGTGATGACCCCCTG TGTTTTGCTCGAGAGTTCGCAGGGGGAGCCTGACAGGGTTGGTGCATGAG ACTCGCTGTCGGCTGGGAGGAGGTCGTGCAGCTGCTGTTGCACCTTTGTT TCTTTGTCAATATGTGGAATGTTTGGGCAGTGACGGGTTTACACGACCAG CTGTCAAGACACCACCACCACCGCAACCGTCACCAGCAAACAAAAAAAAT GTCGGCCGTAAGGAACAAGAAACAACACGCACAAGCCAAGAGCATACAAG GGATGGCCCGTGCCCGCAGCCTCAGAATCCAATCCAACCCCCCCCCCCGA CCAACCCTTTGGCAAGCTCAAGGACACAAACCGATCCCCCGACACATACC GTCCGCGAAATGGGCGGGCGTTGCAGGTACGAGCAGAAGAAGCGACGCTG GACGCGAGCGTACCGGAGGCGAACCTGACGTTCCAACACTTAAGCCGAGC GAGCCAGCTCCCCTTCAAGGAGAAGGTGGACTGGTTCAACAAGCAGTGCG ACCTCCTCAGAGTCCCGTGGGACGTCGAGCATCAGCACCTCAAGGTGCGT ACGCGTTCTGTGTGTGTATGTGTGTGTGTTTTTTTTTGCATCGATCGCGC TAACCAGCTGACCAAAGTCTCAGTGCGGTCGAAAATACACGATGCTCCTG AAGGTGTGATTGTGGGGGGGCGGTTAGTTTGTTATGGCCCAACAGCATCA GCACCTCAAGGTGCCTACGTGCGTGTGTGGGTAAGCTACTTAGGTGAGGC CCAACCGCGTGCACAGCAATAGCGAAATTATTATTCTTGCGTCTGCGACG TTCTATGCAGTTGTATCAACTGCAAGGATTTTTTTTGATGTCATAAAAGA ACATGAAGGCTGTATGTCTTGTTTCTTTAATGTTTGCTGCTCAAGTTTTT TTTTTTGGTTCTTTTGCTCTGCAGATTCGGAGGAATAATTTGTTGGAGGA CAGCATGGCGGCTATGGAGAGCGTGAGATCGGAGTCCATGCGGCAAAGGT TCCGGTTTGAATTTCTGGGGGAGCCCGGCGTTGACGCGGGAGGAGTCGCC AGGGAGTGGTTCCACCTTGTCTCGGAAGGGTGAGAAGAGAGGAGTGAGAT AAAGATAACGTGGTATCAGCAATTCGTGGAAGAGAGTTGACAAACTTTGG TCCTCACGTACGCAGTGGTTCTAGTAACACTGCTGTAGGTGTTTTTTTTT CATTGGATTTGAAAAAAACAGCGCGGCACCAGCAATTCGTACAAGATAAT CAACAGACTCTTGTCCTCATGTGCATAGTTGAATAGACCTTTACAAAACT CTGCTTTGTTTGAATCTCCGAATTTGTTGATATTTAGATATTCAGAGTGC TCAGCTCGAAGCGAACCGGGGAGGTCAGACCATTAGACCCACCCTCAAAT CAAGGTGTTAATTTCGGCCATGCAAGGGCCTGGCCTGCGCAAGAAGTCCG ATCGACTTGTCCTCTTGGTGGTGTATACTACAGCAGTTAACATTTATTTT CGAATTCTGACAAGTGCTTGATGTGATAATTACCGTGTTCCCTCTTGTGT AGAAGATACTCGAAGTTCATAACACCCCCGTCCTTTCCACGCACACACAC CATCTCTCAAACAGCCCGTAACATAGATTCCTTTTCGAAAAGCTCTCCCA CAAAACGCAACAAATCCACAACATCGTGCTGGCCCCAAACTGCGCGCTTC CCATTGCCGTCCCCTTGTGTTGATAAGCTTCAAGTCGGTTGGTGTGAAAA GCAAGTCGGGCTGGGGCAAGGCCCCTCACCGCTCCTTGCGGGTCTCCCAA ATCGATGGGCATCGATTTCGGCGACCCTCAGTGAGCAGTGCAAGGCCTCA CCCCAGCCCCACTTGCCGCTCATTCCGGCCTCCTCGAGCTTATCAACACC AGAGACGGCAATGGGAAAGGCGCATCTAGGGGCCAGCACGAGTGCCACGA CTACAGACTACAAACGGCAGCTAAAAGGAAAAGGTCGCCAATAATCTTGG TTGAATTGACAAAAATCTTGGTTGAATTAACACGCTGATATGAGAGCATT ACGGTCTTACACCACTGTCCCGCACAGATAGACGTTGCTAGTTGTTGTTT GCGAGGGTGGGGGGGGGGGGGGGGGGGGGGGCTCCAGTGTCCGTGGAGGG GAGAGGGGGGAAGGCAACAACAAATCTCGGCAGAATCCGCCTTGCAGAGT CGGCGCCTAATTGTACATGCATGTGGATCCCACAGGAGCGTACGGCGTAC CAGATCCTGTGTGAGATGGGGACTAGTTATGCCTTCTTCCGGCCGCATTG TGTGCCGGTTGTCTCGCTTGTCTACGTACAACCAGAGATACGTTTTCAAA CTTGGTGCCCTTGGAACGCGTGAGCAAATCGCACATACTAAACCCAGCAC GTTACTTTCCTCGCTGGCGTGTCCCTCTCTCCCTGCCAGGGTCTTCAACC CCGACTTCGCGTTGTTCCAGTACTCGAGCATCAACCAGATGTGTATGCAG ATCAGTGCTAACTCCGGGGTGGCCAACGAGCAGCATCTGCAGCATTTCCA CTTCGTCGGCAGGTGACGAAGGATGTATGGACGGGGGGAGGCTTGATATC GTGGTGTGTTTGTTCAACAGGTTGTACGGCGGGGGAGCCATCGCACGATG TCGCTTCGTTCTTACGGCGTCGTTGGGTTGTTACAGAGAAGTATGGAGGT GTACAAATTGTGACACCTATGCGAACATGACAGCATGAATTTGTCGTCGT CGACGACAGCAAACGGCACGATAGCGTACACGCTCATTTTCTCGCACGTG GTACTGACTGTTCATCTCTCGACAAATATCATAGAACGAGAGAAAGAGTG CCCAGCGCAAGCAGCAACCAAAACGCTAGCTTCTTCGCCGGTAGTTCGTC GCGACTACTTACGACGACGGTAAGGAACGACTAACGCAAGCATCAACCTG AAACGCGAATGTTTCGCACGTGGTTTACTTCAGTTAATGACACACACGCA CACACACAACCAACCACAGCAAAAAACAACACCAACGGATTCTGAACAAC GTGCGTTGACTCAGGTTGCTGGGCAAGGCGCTGTTCGACGGCCAGCTCGT CCAGGCGCATCTCGTCCGGCCGCTGTATAAGCACCTCCTGGGCTGGCCGA TCGCCTTCAGCGACCTCGAGCACGTGGACCACTTCACACACGAATCCCTC ATTAAGATGACCGAGCTCGACGATGTTGAGGTAAGGACAGGAATCAACGC AGGCTTTGTTAGTTTGGCGAACACAAACTGGATAAAGCAGGTTTTTTTTC TTAAGCGAACACACACTGGATACAGTACACGATCGGCTAAATTAGGTTCA CGTCTGCGTGCCCCCCGTCTGAGCTTTGTTCGTGCTAAACTTACTTTCTT TGCGTAGGCAGTCCGGAGAGAACAAAACACAGGCGAGATATATGCTGTCT GGGCAAGGGGGATGTGTGGAGCGGGAGTATGACCGACGGTCAATAGTGTG CGGGTGGCCAAGTAGTGCAAGGACCCGAGATAGTTTGGTCTACATTCATA CTGGCACTGGTTTTGCCCTACTATATTGTGTCGTCTGTCGATTCCAGTCA GTCAGTAAGCGACGTTTGAGTGAATGTGTGTCCGTCCGTCTAATAATTTG CGACCTTTTCGACCGATTTCGGGCAAAAGAAATCGAGCCTTGGAAACGAA CACCCATCTTTGAGAAAACATACGCGTGACCCCCCCCCCATCCAGGTGTG CTGTCTAGACTTCACGGTCACGGAGGACCGCCTGGGGTCGATGGAGGTCG TGGACCTGAAGGAAGGTGGTGCCGAGCTCGACGTTACGAACGACAACATC GGGGAGTACGTGGAGCTCGTGCTCAAGCACCGGCTTCTGATGCGCATGCG CGACCAGCTCACGGCGTTCCTGGTGGGTTTCTACGACGTTATTCCGGAGG CGTTATTGTCGGTGTTCGACTTCCAGGAGCTTGAGCTCCTCATGTGCGGG CTGCCGCACATCGATCTGACGGACTGGCAGAGGAACACGGACTACACGGG GGAGTTCGAGCGGAAGGCGGGGAACCACAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7808:1448..5728-

>mRNA_Ecto-sp13_S_contig7808.19061.1 ID=mRNA_Ecto-sp13_S_contig7808.19061.1|Name=mRNA_Ecto-sp13_S_contig7808.19061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1041bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7808:1448..5728- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGACGCTGGCGGGATCGAGCTTCCGCATCGAAGGCAGCGCGTTCGTTCG
CAAACTCTCCAAGCTGAGGCCTCGGCACTTCATGCTTGAGCTGGTACGAG
CAGAAGAAGCGACGCTGGACGCGAGCGTACCGGAGGCGAACCTGACGTTC
CAACACTTAAGCCGAGCGAGCCAGCTCCCCTTCAAGGAGAAGGTGGACTG
GTTCAACAAGCAGTGCGACCTCCTCAGAGTCCCGTGGGACGTCGAGCATC
AGCACCTCAAGATTCGGAGGAATAATTTGTTGGAGGACAGCATGGCGGCT
ATGGAGAGCGTGAGATCGGAGTCCATGCGGCAAAGGTTCCGGTTTGAATT
TCTGGGGGAGCCCGGCGTTGACGCGGGAGGAGTCGCCAGGGAGTGGTTCC
ACCTTGTCTCGGAAGGGGTCTTCAACCCCGACTTCGCGTTGTTCCAGTAC
TCGAGCATCAACCAGATGTGTATGCAGATCAGTGCTAACTCCGGGGTGGC
CAACGAGCAGCATCTGCAGCATTTCCACTTCGTCGGCAGGTTGCTGGGCA
AGGCGCTGTTCGACGGCCAGCTCGTCCAGGCGCATCTCGTCCGGCCGCTG
TATAAGCACCTCCTGGGCTGGCCGATCGCCTTCAGCGACCTCGAGCACGT
GGACCACTTCACACACGAATCCCTCATTAAGATGACCGAGCTCGACGATG
TTGAGGTGTGCTGTCTAGACTTCACGGTCACGGAGGACCGCCTGGGGTCG
ATGGAGGTCGTGGACCTGAAGGAAGGTGGTGCCGAGCTCGACGTTACGAA
CGACAACATCGGGGAGTACGTGGAGCTCGTGCTCAAGCACCGGCTTCTGA
TGCGCATGCGCGACCAGCTCACGGCGTTCCTGGTGGGTTTCTACGACGTT
ATTCCGGAGGCGTTATTGTCGGTGTTCGACTTCCAGGAGCTTGAGCTCCT
CATGTGCGGGCTGCCGCACATCGATCTGACGGACTGGCAGAGGAACACGG
ACTACACGGGGGAGTTCGAGCGGAAGGCGGGGAACCACAAG
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