mRNA_Ecto-sp13_S_contig1227.1906.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1227.1906.1
Unique NamemRNA_Ecto-sp13_S_contig1227.1906.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI)

HSP 1 Score: 674 bits (1740), Expect = 5.860e-236
Identity = 303/313 (96.81%), Postives = 307/313 (98.08%), Query Frame = 1
Query:    1 MSAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD--WCLPCPLFHVICRWIVACRDPDAQPRIRP 933
            MSAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGG+DGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPD +ATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWY+TGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITA+  WCLPCP FH ICRWIVACRDPDAQPR RP
Sbjct:    1 MSAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAETNWCLPCPFFHRICRWIVACRDPDAQPRSRP 313          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 2.110e-114
Identity = 159/273 (58.24%), Postives = 196/273 (71.79%), Query Frame = 1
Query:   28 FPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD 846
            F  +E     YNA G   V++R    TDPA+LAEYGDG +PLRW Y+KGEMA NGNY+E   I+ RHG+CGDP+  ++   +G N YSTPN DWP+L  +++GQ +EIK  M A+H+GH+EFFIC+  +++DPDGIA QECFN YPLTR+EGD  NSPIDPNYPGRYY DP CRE ET+Q     A  GYV+  +Y LPE L C+ C+LQM Y+TG+ C H GYEEF PASW S CAP K DWI+L    CG+N  +  EEFWAC+D AIT D
Sbjct:   11 FERMEYCPSCYNARGPTYVKERGMVNTDPAVLAEYGDGEWPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEE---EGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCREGETDQTKPEGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENG-SYPEEFWACADFAITPD 279          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 2.470e-89
Identity = 147/277 (53.07%), Postives = 179/277 (64.62%), Query Frame = 1
Query:   31 PLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGW-YPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITADWCLP 858
            P +E     YNA G   V+ RA    D A L  YG G  +PL +    GE A NGNY+E   I+ RHGVCGDP+   Q   +G N YST N +W  L  F  GQ +E+  VM A+H+GH EFF+C+T D+DDPDG+ TQECFN +PLTR++ DG  SPIDPNYPGRYY DP CRE ETEQ  +  +  GY + M Y LP+ + CEHC+LQM Y+TG+ C H GYEEFNP SW S CAPNK DWI+L    CG       EEFWACSD ++T+D   P
Sbjct:   44 PEVEFCPHCYNARGPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPE---QNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECREEETEQSSN--SIEGYNIKMRYVLPD-IECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCG-TRGQYPEEFWACSDFSMTSDGSTP 309          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D7FZR0_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR0_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.480e-87
Identity = 145/290 (50.00%), Postives = 181/290 (62.41%), Query Frame = 1
Query:    4 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGW-YPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCR--ENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITADWCLPCP 864
            S  + + + P  +     YNA G    + R   L DP +L  +G G  +PL +V     +APNGNY+EP  ++VRHGVCGDP+   Q    G NTYST + +W  L  ++ GQ +E   VM A H+GHLEFFIC+  +  DPDGI TQECFN+YPLTR+EGD  NSPIDPN+PGRYY DP CR    E +Q     A  G  M M Y LP+ + C HC+LQM Y TG+ C+H GYEEFNP SW S CAPNK DW+D + + CG   +   EEFWACSD +IT D   P P
Sbjct:   33 SESFLDKDDPNFDGCPHCYNAHGSAGTKARGIELMDPDVLESHGGGSEFPLAFV----PLAPNGNYLEPNEVAVRHGVCGDPE---QTKPAGSNTYSTASSNWEPLATYRSGQVLEFVIVMNAHHWGHLEFFICNADN--DPDGIPTQECFNEYPLTRAEGDDDNSPIDPNFPGRYYCDPTCRGQTGEVDQTKPLHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCHHIGYEEFNPPSWPSACAPNKEDWVDTTREACGQGGY-YPEEFWACSDFSITRDATPPSP 311          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D7FZQ9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ9_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 5.520e-85
Identity = 138/284 (48.59%), Postives = 181/284 (63.73%), Query Frame = 1
Query:    4 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGW-YPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCR--ENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD 846
            S  + + + P  +     YNA G    + R   L DP +LA++G G  +PL +V      APNGNY+EP  ++VRHGVCGDP+   Q    G NTYST + +W  L  F+ GQ +E   VM A+H+GHLEFFIC+  +  DP+GI TQECFN+YPLTR+EGD  NSPIDP++PGRYY DP CR  E E +Q     A  G  M M Y LP+ + C HC+LQM Y TG+ CYH GY++F+P SW  +CA  K  W++ +++ CG  E    EEFWACSD +IT+D
Sbjct:   34 SESFLDMDDPNFDGCPQCYNAHGSNGTKARGNELMDPDVLAKHGGGIDFPLSFV----PRAPNGNYLEPNEVAVRHGVCGDPE---QNKPSGSNTYSTASSNWEPLTTFQSGQDLEFNVVMNAYHWGHLEFFICNADN--DPNGIPTQECFNEYPLTRAEGDDYNSPIDPDFPGRYYCDPTCRGEEGEVDQTKPVHAISGENMKMRYVLPD-IECSHCILQMVYHTGNTCYHIGYDDFDPPSWPGDCATTKEQWVNTTVEACG-QEGYYPEEFWACSDFSITSD 306          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 7.620e-85
Identity = 138/282 (48.94%), Postives = 176/282 (62.41%), Query Frame = 1
Query:    4 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLD-DPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD 846
            SAV+Q +     E   G  N+GG V V+++    T+  +LAEYGDG +PL   Y+KGEM  NGN+ E   IS RHG+CGDPK   Q   +  N YS+   DW  L+  K+G  ++IK V+  +  GHLEFFIC++ DL   P     QECFN  PLTR+EGD VNSPIDP YPGRYY +PPC   E  +     A  GYV+ M Y LPE L C+HCVLQM ++TG+ C H GY++F P SW S+CAP K++WI+     CG       EE W+CSDI+IT D
Sbjct:   36 SAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARHGICGDPK---QFSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDGAQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCG-MAGAYPEEHWSCSDISITTD 313          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 6.880e-84
Identity = 147/286 (51.40%), Postives = 188/286 (65.73%), Query Frame = 1
Query:   10 VYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG-WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITADWCLPCP 864
            V++E +FP ++     YNA G   V++RA+  TDPA+L EYG G  YPL +    G+ A NGNY+E   I+ RHG+CGDP+   Q   +G N YST N  W VL  FK G+ +E+  +M A+H+GH EFF+C+  ++DDPDG+ TQECFN+YPLTR+  DG  SPIDPNYPGRYY DP CR  ETEQ     A  GY + M Y LP+ + C+ CVLQM         H GY+EF+P SW S CAPNKSDWI+L+   CG+ E    EEFWACSDI++T+D   P P
Sbjct:   41 VFKEWDFPGIDYCPHCYNARGPDYVKERAKAKTDPAVLNEYGGGDEYPLYF----GDFADNGNYLETDEIAKRHGICGDPE---QNADEGSNVYSTANIGWDVLGSFKSGEVLEMDIIMNAYHWGHCEFFLCNADEMDDPDGVPTQECFNRYPLTRAADDGDASPIDPNYPGRYYVDPECRAGETEQGSPEGAPKGYNIKMRYVLPD-IECDRCVLQM---------HIGYDEFDPPSWPSTCAPNKSDWIELNRYICGE-EGAYPEEFWACSDISLTSDGSAPPP 308          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 5.450e-80
Identity = 137/300 (45.67%), Postives = 173/300 (57.67%), Query Frame = 1
Query:   37 LEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG--WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYD----------------------------WRAGGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD 846
            +EK AG++N GG   VQ R     DP ILA+YGDG  W  +   +DKGE  PN NY+E   I+V HGVCGDP    QGG D  NTYSTPN  WP +  ++ G  +E+KAV+   H+GH+E+F+CDT D+DDPDG+ TQ+C N YPL R E D  NSPIDP+YPGR++ +P CR    E D                              WR+  GY+ T  Y LP N+ CEHCVLQM Y+    C+HPGY EF+P  W  +CAPNK +W+      C D        F+ CSDI + AD
Sbjct:   60 VEKWAGSFNGGGADAVQARTIDNIDPDILADYGDGDVWI-VGAAWDKGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVAD 353          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 6.410e-80
Identity = 132/289 (45.67%), Postives = 170/289 (58.82%), Query Frame = 1
Query:    4 SAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDG--WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRA---------GGGYVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAI 837
            S  + + +   +EK AG++N GG   VQ R     DP +LA+YG G  W  +   +DKGE  PN NY+E   I+V HGVCGDP    QGG D  NTYSTPN  WP +  ++ G  +E+KAV+   H+GH+E+F+CDT D+DDPDG+ TQ+C N YPL R E D  NSPIDP+YPGR++ +P CR    E D   R            GY+    Y LP N+ CEHCVLQM Y+    C+HPGY EF P  W  +CAP+K DW+      C D        F+ CSDI +
Sbjct:   84 SKEFNDGDEYYVEKWAGSFNGGGADAVQARTIDNIDPDVLADYGGGDVWI-VGAAWDKGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366          
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 2.110e-78
Identity = 129/275 (46.91%), Postives = 163/275 (59.27%), Query Frame = 1
Query:   61 NAGGQVEVQDRARRLTDPAILAEYGDGWYPLRWV----YDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWR---AGGG------YVMTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAD 846
            N  G  EVQ R     DP +LA+YGDG Y   W+    +D GE  PN NY+E   I+V HGVCGDP    QGG D  NTYSTPN  WP +  ++ G  +EI+ V+   H+GH+E+F+CDT D+DDPDG+ TQ+C N +PL R E D  NSPID  YPGR++ +P CR    E D   R    GGG      Y+    Y LP N+ CEHCVLQM Y+    C+HPGY EF+P  W  +CAP+K DW+      CGD        F+ CSDI + A+
Sbjct:    5 NGTGADEVQARTITNIDPDVLADYGDGNY---WIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFDP-EWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVAN 271          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1227.1906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU28_ECTSI5.860e-23696.81EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G4D7_ECTSI2.110e-11458.24EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LMS9_ECTSI2.470e-8953.07EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
D7FZR0_ECTSI3.480e-8750.00EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FZQ9_ECTSI5.520e-8548.59EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFL8_9PHAE7.620e-8548.94CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FRE8_ECTSI6.880e-8451.40EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JN72_9PHAE5.450e-8045.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMP7_9PHAE6.410e-8045.67Chitin-binding type-4 domain-containing protein n=... [more]
A0A6H5JNS7_9PHAE2.110e-7846.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1227contigEcto-sp13_S_contig1227:12206..18068 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score679.9
Seed ortholog evalue7e-193
Seed eggNOG ortholog2880.D7FU28
Model size1429
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Ec32 ortholog descriptionWSC domain, Cellulose/chitin-binding and galactose-binding-like domain protein
Ec32 orthologEc-27_001200.1
EC3.4.21.7
Cds size1134
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1227.1906.1prot_Ecto-sp13_S_contig1227.1906.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1227 12206..17389 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462652.4741597-CDS-Ecto-sp13_S_contig1227:12205..122281681462652.4741597-CDS-Ecto-sp13_S_contig1227:12205..12228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 12206..12228 +
1681462652.486805-CDS-Ecto-sp13_S_contig1227:13662..138111681462652.486805-CDS-Ecto-sp13_S_contig1227:13662..13811Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 13663..13811 +
1681462652.4951131-CDS-Ecto-sp13_S_contig1227:14342..144221681462652.4951131-CDS-Ecto-sp13_S_contig1227:14342..14422Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 14343..14422 +
1681462652.5064874-CDS-Ecto-sp13_S_contig1227:15148..152741681462652.5064874-CDS-Ecto-sp13_S_contig1227:15148..15274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 15149..15274 +
1681462652.5207186-CDS-Ecto-sp13_S_contig1227:15710..157761681462652.5207186-CDS-Ecto-sp13_S_contig1227:15710..15776Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 15711..15776 +
1681462652.5306573-CDS-Ecto-sp13_S_contig1227:16050..162731681462652.5306573-CDS-Ecto-sp13_S_contig1227:16050..16273Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 16051..16273 +
1681462652.5399508-CDS-Ecto-sp13_S_contig1227:16741..169181681462652.5399508-CDS-Ecto-sp13_S_contig1227:16741..16918Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 16742..16918 +
1681462652.5476315-CDS-Ecto-sp13_S_contig1227:17099..173891681462652.5476315-CDS-Ecto-sp13_S_contig1227:17099..17389Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1227 17100..17389 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462652.5554762-UTR-Ecto-sp13_S_contig1227:17389..175251681462652.5554762-UTR-Ecto-sp13_S_contig1227:17389..17525Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1227 17390..17525 +
1681462652.5641768-UTR-Ecto-sp13_S_contig1227:17909..180681681462652.5641768-UTR-Ecto-sp13_S_contig1227:17909..18068Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1227 17910..18068 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1227.1906.1

>prot_Ecto-sp13_S_contig1227.1906.1 ID=prot_Ecto-sp13_S_contig1227.1906.1|Name=mRNA_Ecto-sp13_S_contig1227.1906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MSAVYQEDNFPLLEKNAGAYNAGGQVEVQDRARRLTDPAILAEYGDGWYP
LRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGKDGENTYSTPN
KDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDGIATQEC
FNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWRAGGGYV
MTMNYDLPENLVCEHCVLQMWYFTGHKCYHPGYEEFNPASWGSECAPNKS
DWIDLSIDYCGDNEWNLAEEFWACSDIAITADWCLPCPLFHVICRWIVAC
RDPDAQPRIRPYRNRTPRRRDDGAHRCCYRRTPRSDPCSHRRDGGAYRCC
HTGTHTGSRGRDGGAHHCWDHDDPRTR*
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mRNA from alignment at Ecto-sp13_S_contig1227:12206..18068+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1227.1906.1 ID=mRNA_Ecto-sp13_S_contig1227.1906.1|Name=mRNA_Ecto-sp13_S_contig1227.1906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1227:12206..18068+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGCGGTCTACCAAGAAGAGTGAGTGGCTTTGTTGTTTGACGTCGT CGACTCACGTTTCTGTGGCATACAACCTCCTCTCTTTTCCTACTCCAGTG CATTGTTTTGACTTGCCTACTTCTCCTGTGTGGTTGTATTTGTAAGCCCA ACGTCCTACAACGCGCTTTGTTTTCAACGTCAACCACCGATTCGGTATAT GCTGCAGTGCGACCTCTATTCAGGGAGTGGCAATGCGAGCTTTCTTGTCG AACTGGAAACGTTTCGTACTCAGCAAGACTGACTGATTCGAGTATAGCGC TTTGAGTCAGCCGATGTAGGTAGGTTACTCCGTCGTGTCCCTAATGCGCT ACAGCTGTAGATGCGAAATGTACAAAGATCGCGACCAAAAAGAGACGGAA GTAAATGTGCACCAATACCAACGGTGTTATGCGTGAGTCCGTCGCCTAGG GCAAATAACGCTTTTTGAAATAGGTTCATTGAACACGCTGGGACAATCTT CGTCCTGACGAAAGCAACATCTCTGGGAAGCTCCCCAACTGCTCCCCCAT CCAGTCACACTCTTACTGAATCCCCTGACTACGAATGGTTAAGCGGGATT TGTCGGCGAAACTCCGGCTCAAACCCCAGTCGCCTGCACAAGGGGGCAGC GTTTGAATAGTCGTCAGCAAAGTGTTGATCGTTACATGGCGCCGGCCTCC CGTGTGTTTCCTGCCATCACGAGTGTGCACATGCTGAGGCTGTTCCTCCC TGCGAAAGGCGCGAGTCATGTTTGTTTCCGTTTTCCGAAGCTTAAACGGT TGTTTTCACAGCTGCAGCTGCCACTGCAACCGCGCGTATTCAAAATGAGC GCACCGCAAGCACTATAAATGTGTTCTTATTCCTTAACAGTCAAGTACTG ATGAAACGCGTGCTCCGTTGTGACCAGATGGTGTACATGGTGGCTGTTAA GGCTGGCAGCAGTTGGTGGTAGAGCATGTCACAAGAGCAGGGCGACAGTG AACAAGACCTTTAAGTTCCAACCCCCCGATGCATGTATCGATGCGCACGT CGTAACACCACCTACCCGTTCAATTCTCAGAACATCAAGTATCCTCTCCC ACTCGTAGCAGGGCGTGGCCCGGCCAACACAGGAAATGCCGTTTATACCA ACTGCCTCTTGACAGTTTCCGATGTTGCTGTCCAAGTACTGAACACGAAC TAATGAACGATTACGTCGCTTCCCTCAAGTGCACCCCCCGATACCTCGCC TCTACCACTCGTAGCAGGACGTGTGGCCCGGCCAACACAGACAATGCCGT TTATACCAACTGCCTCTTGACAGTTGCCGATGTTGCTGTCCAAGTGCTGA ACACATTCTTCCCTCATCGCACCCCCCCCCTTCCGCCGCTATAAACCATA CCGTCGTGTATTGTTCCCTGCACATGGGCGGCATCCTCCGTCACGAACCA CGAACAGCAACTTCCCTCTGCTCGAGAAAAATGCCGGGGCCTACAACGCG GGAGGGCAGGTGGAAGTCCAGGACCGCGCCCGCAGGCTCACCGACCCTGC CATCCTGGCCGAGTACGGCGACGGCTGGTACCCTCTCCGCTGGGTGTACG ATAAAGGTGGCGCGGCGTTTTTATGATGCCGACGTTGGTGCAAACGCGCG TCCACGGGTTCGTTCTCTCACCTTGTTTGGTGGTCGTTTTGGTTTGGTGT TCACGATCACCCTCTTCTGCCAGCATAAGGTAGCCGTCATCGTGATGGAT GGCGTGGCATGCTACCAACCGGGGGCAACGATTCGTATGCACGGCGGCAT CGCACCCCCCCCCTGCTCGTTCGTCCTTGTCTTTTCGTTTCTCCAACACC ACAAGTATCTTTTGTCGGTTGCCGTGGATGCCGAGTTTGATATGGCTTGG ATTCGAGACATTCTTCGACGTCTCACTACCCCCGTACAGGCGGTGCTATG TTGTACGCCGTAGTCCGAGATGAAACCAATACACGGTTGGGTCTCTTGTT GCCTACACCCGCGTGTTGGACTGTCAAAGTGCAAAGTGTGATTCGACCAG AGACCCTGAATGGCGCCGTGCATGAATGTGCCCCTTCCCCCCTCACTCCT GCAAGTATCGTACCTCCAAACTCATGTCTTCACCCAGGTGAGATGGCTCC CAACGGGAACTACATCGAGCCTCAGGGAATCTCCGTCCGGCACGGGGTGT GCGGCGACCCGAAATCGGTACGTTTCTCACGACCACCTACTTACAGCCTA TACGCACGTCGTTGTGACCCACTCTCTATTGTCACTGCTGTAGTTTGAGG TCTGCTCTGGTTGTCAGCACAAAGTTCAGTACCAAGTTTCGTGCTTCCAA GCGCTTGGGGTCTTCACGCTAGTGTTCCCACGAGTTCGCCAATTCATGCT GTACCTGTGCCACTGCTGAGCCAGGTACAATATTCGAAGAGGTAACCAGA TAGAAGCACACGTGTGTTATGTTTTGACGTTTCGCTGGGGGGCTGTTGAA CAGCTTTTCTGGCGCCAGTCCAATCATCAGCGGTCGTGGTGCCCACATCG GCCAAGGGAGAGACGCGTATTGCATAAGAAAAGCCATCAGCAACACCGCT GTACTGCTGCTATGCTGCTGATGTGTTGTATTGTGGACTTGTGATCTTCC ACATTGATTCTACCGATGGCGAACGCTGCAAATTCATAGGCTGAAGCCGT CGATGGTACCCTCTCCGCTGGATGTACGATAAAGAGTCCAACCCGGTTTT GGTGTTTTTTCCGACGTCACCTTCTTCTTTTGTGTACCCCCCTTGCCCCC TCGAAAAGACCCCTCCAAGGCCTGTACACTCCAATCAAGGACACCCGGGG CTGAAATTTCTGTCTTCTGTTCGCCCCCCGCCTTTCTTTCTTCCCGCGTA TGTACGCCCCATGGTCGTGCTTGCTGCTGCCTCGTTTTGTCAGGGTGATC AGGGTGGAAAGGACGGCGAGAACACGTACAGCACGCCCAACAAGGACTGG CCGGTTCTCCAAGAGTTCAAGCAGGGCCAGTCCATGGAGATCAAGGCCGT CATGAAGGCGTGGCACTATGTGCGTATGTACTTCCTGTGCCGTTCCACAT GAGATATTGTGGAACAAGGGGAGCGAACTATTACGCTGTGTTGTTTCACA ATGGATTGATTGTGCGGACGAGGGTAAACTTGAGAAGAATACACACTTGT ACGTGAATCGTCGTGTCGTGAAAGACACCTCCTGCCAACCGATCGTGACG AAAGGGCGAGGGAGGAAACCACCGACCACATTCTAGCTTGTAAACTGCAC CGATACACGGCAGTTTGGGTCTCGTTGCAACACCGTTCATCAGAACCATG CGGGGCAGTTTTGTTCTAGGACGGCATTATACCCTTGTTAGTTTTTTTTG TGTCGGCCGTTGAAGGTGGACTGGAGTCAACACACCAGACGATTTTCGAA CCGCAAACAAAGGAAGGAATCCCCCCCCCCGCCCCCTTTCTCCCTCGTGA CGCAGGGGCACTTGGAGTTCTTCATCTGCGACACCCAAGACCTCGATGAT CCCGACGGCATCGCCACCCAGGTATATATGTACACGACACAACCGCATCA CTTGGTGGCTCATCAAAAACCAGACACTAGAGACATGCATGCGTGCATGA AAGCATCCGTGCAGCAGAGGAAAATCATTGGCGGCGCGCTGACCTACAGC AGTTGCGTCCCGTGCTCGTCCCCGCCACCCTCTGTTGCTTCTGCTGCACT GTTTCCACAGTAATTATCCATTTGGCTGACGGTTGTTGCTTCTGCTGACC CCCCCCTCCCCCCGATACCACGACGATGCTGCCCGCCGCCCGCAGGAGTG CTTCAACAAGTACCCGCTGACACGCTCGGAAGGCGACGGCGTCAACAGCC CCATCGACCCAAACTACCCCGGGCGCTACTACGCGGACCCCCCCTGCCGT GAGAACGAGACGGAGCAGGACTACGACTGGCGGGCCGGCGGCGGCTACGT AATGACCATGAACTACGACCTGCCCGAGAACCTCGTCTGCGAACACTGCG TCCTCCAGATGTGGTACTGTGAGTAGAGCTTCGTGTTGTAGGCCAGTCAG CTGTGGAAGTAGTAGTGGTAATGCGTTCTTCGTAGACCGGTCGTGACTCG TTCTGTTGCCCATCTGTTCATGTGTGCGTGTTTGTGAGTGAAGCGAGCAG GCGGGCGGGGACACTTGTCGCCCAAAGTTGTGACCACTTTTCTCGCGCCC AAGTTGGTCTGGGATCCTCTCAGGTGGAAAGCGAAACCTTCGCGCACGAC CCCCCGCCACCGGCAGTAGCGTGCCCCCCGCTGGAGGCGCTTTCCTTAGA TCTTCGGTCTTGATCGAATGCCGATGATTCGCGTGCCTCCCCTCCGAATC CAATCCGAGCATCTTGCGCCGGAAAACGATTTCTCATGCATAGTGACGGT TGTGTTTACGTCGCTGGCTACATCGCTCACGCCCCTCTACCCCCCCCCCA ACCCACTCTCCGTGTTGGTGCGACACGACACACAAGTCACCGGACACAAG TGCTACCACCCTGGATACGAAGAGTTCAACCCCGCATCCTGGGGAAGCGA GTGCGCGCCCAACAAGTCCGATTGGATTGACCTGAGCATCGACTACTGCG GCGACAATGAGTGGAACCTCGCTGAAGAGTTCTGGGCGTGCTCGGACATC GCAATCACGGCCGGTGCGTGAAAGCAATTATTGAACGCAGGAACGAGAGA GAGAGAGAGAGAACGAGTTATCTCATATGTAGTACTCATCGTCCCAAAGC CCAACTTTGGTCAATACACGAAAAGCCTGTTCCATGTTTTTCACCCTCTC CTCCTTTCCTCTCTCTGCAACATTTTGCTCGACACAACAACAAGATTGGT GTCTCCCTTGCCCCCTCTTTCATGTAATCTGCAGATGGATCGTCGCCTGC AGAGACCCCGACGCCCAGCCCCGAATCCGCCCCTACCGCAACCGAACCCC CCGTCGACGCGACGACGGAGCCCACCGCTGCTGCTACCGCCGAACCCCTA GATCCGACCCCTGCTCCCATCGAAGAGACGGCGGAGCCTACCGCTGCTGC CACACCGGAACCCACACCGGCTCCCGTGGAAGAGACGGCGGAGCCCACCA CTGCTGGGACCACGATGACCCCCGAACCCGTTGAAACCACGGCGCCCCCA ACGGACGGTGACGGTGACGTCGGTGGTGGGGAAGAGGTTGACTACGTCGG CTGCTTCCACGACAACACGGAGGACCGCATCCTGGGGGACAAGCTCGATT CCATGGACATGACGACCGAGGTGATGATGAAGACGGGCACATTTTGGTCT ACGCGACTCTACTTTGTAGAACCGATGAGTTCTCGGACCAGATGGGTTCG TCTTGCAGGCTAGATAACGGTAACAAGAGCAGGATCGGGGAGAGAGCATC TATGTTGCCGTCGTATATGTGTGGACTCCTGTTTTATCATTTAAATTGCC CTGTTCCGTCGATGAGCGTCGGCTATCTCCCCCCTTCCACCCGCGGCATG CCTTTGGCCCTTGTTGAGAGACATGCCTGTTGGGAGGAGAAGCCCTCGAT ATTGACGGGCAGAATTGCGTGCGTCGTCACCACCATGAATTTGCACCTGA GGCAAGCACCAAGGTCACTCCGTCTCTACTTCTGTTTCGGCCACTGGTGT TCAGGTTTGCCTGGCGCACTGCACGGAGCTGGGCGCTGTGTTCATGGCAA CCCAGTTCGGCTTCGAGTGCTGGTGCTCTGCCGATGAGCTCCTCGGCTAC GAGCGCCACTACGAAATGAACGACGCCGACGCTGTGTGCGACATGTCCTG CCGGGGCGATAAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1227:12206..18068+

>mRNA_Ecto-sp13_S_contig1227.1906.1 ID=mRNA_Ecto-sp13_S_contig1227.1906.1|Name=mRNA_Ecto-sp13_S_contig1227.1906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1227:12206..18068+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTGCGGTCTACCAAGAAGACAACTTCCCTCTGCTCGAGAAAAATGC
CGGGGCCTACAACGCGGGAGGGCAGGTGGAAGTCCAGGACCGCGCCCGCA
GGCTCACCGACCCTGCCATCCTGGCCGAGTACGGCGACGGCTGGTACCCT
CTCCGCTGGGTGTACGATAAAGGTGAGATGGCTCCCAACGGGAACTACAT
CGAGCCTCAGGGAATCTCCGTCCGGCACGGGGTGTGCGGCGACCCGAAAT
CGGGTGATCAGGGTGGAAAGGACGGCGAGAACACGTACAGCACGCCCAAC
AAGGACTGGCCGGTTCTCCAAGAGTTCAAGCAGGGCCAGTCCATGGAGAT
CAAGGCCGTCATGAAGGCGTGGCACTATGGGCACTTGGAGTTCTTCATCT
GCGACACCCAAGACCTCGATGATCCCGACGGCATCGCCACCCAGGAGTGC
TTCAACAAGTACCCGCTGACACGCTCGGAAGGCGACGGCGTCAACAGCCC
CATCGACCCAAACTACCCCGGGCGCTACTACGCGGACCCCCCCTGCCGTG
AGAACGAGACGGAGCAGGACTACGACTGGCGGGCCGGCGGCGGCTACGTA
ATGACCATGAACTACGACCTGCCCGAGAACCTCGTCTGCGAACACTGCGT
CCTCCAGATGTGGTACTTCACCGGACACAAGTGCTACCACCCTGGATACG
AAGAGTTCAACCCCGCATCCTGGGGAAGCGAGTGCGCGCCCAACAAGTCC
GATTGGATTGACCTGAGCATCGACTACTGCGGCGACAATGAGTGGAACCT
CGCTGAAGAGTTCTGGGCGTGCTCGGACATCGCAATCACGGCCGATTGGT
GTCTCCCTTGCCCCCTCTTTCATGTAATCTGCAGATGGATCGTCGCCTGC
AGAGACCCCGACGCCCAGCCCCGAATCCGCCCCTACCGCAACCGAACCCC
CCGTCGACGCGACGACGGAGCCCACCGCTGCTGCTACCGCCGAACCCCTA
GATCCGACCCCTGCTCCCATCGAAGAGACGGCGGAGCCTACCGCTGCTGC
CACACCGGAACCCACACCGGCTCCCGTGGAAGAGACGGCGGAGCCCACCA
CTGCTGGGACCACGATGACCCCCGAACCCGTTGA
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