prot_Ecto-sp13_S_contig78035.19058.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78035.19058.1
Unique Nameprot_Ecto-sp13_S_contig78035.19058.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length64
Homology
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BLAST of mRNA_Ecto-sp13_S_contig78035.19058.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.740e-20
Identity = 46/53 (86.79%), Postives = 49/53 (92.45%), Query Frame = 0 
Query:   11 VDDELATLVADEPPRAAKQSPLAKALLKTAVENPKGVRSLLKEQAVTAAQACG 63
            +DDELATLVADEPPRAAKQSPLA ALLKTA+ENP GVRSLL+EQA TAAQ CG
Sbjct:   28 LDDELATLVADEPPRAAKQSPLATALLKTALENPGGVRSLLREQAETAAQGCG 80
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BLAST of mRNA_Ecto-sp13_S_contig78035.19058.1 vs. uniprot
Match: A0A6H5K0E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E2_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.070e-17
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 0 
Query:   12 DDELATLVADEPPRAAKQSPLAKALLKTAVENPKGVRSLLKEQAVTAAQAC 62
            D+ELATL+ADEPPRAAKQ+PLAKALL+ AV NP GVR+LLKEQAVTAA+ C
Sbjct:   62 DEELATLLADEPPRAAKQTPLAKALLQAAVGNPGGVRALLKEQAVTAAKGC 112
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BLAST of mRNA_Ecto-sp13_S_contig78035.19058.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.680e-15
Identity = 39/52 (75.00%), Postives = 47/52 (90.38%), Query Frame = 0 
Query:   12 DDELATLVADEPPRAAKQSPLAKALLKTAVENPKGVRSLLKEQAVTAAQACG 63
            D+ELATL+ADEPPRA KQ+PL+KALL+TAV N  GVR+LL+EQAVTAA+ CG
Sbjct:   62 DEELATLLADEPPRAVKQTPLSKALLQTAVGNSGGVRALLEEQAVTAAKGCG 113
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BLAST of mRNA_Ecto-sp13_S_contig78035.19058.1 vs. uniprot
Match: A0A6H5K9U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.280e-14
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0 
Query:   12 DDELATLVADEPPRAAKQSPLAKALLKTAVENPKGVRSLLKEQAVTAAQACG 63
            D+ELATL+ADEPPRAA Q+PLAKALL+    NP GVR+LLKEQAVTAA+ CG
Sbjct:   61 DEELATLLADEPPRAANQTPLAKALLQA---NPGGVRALLKEQAVTAAKGCG 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78035.19058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNQ5_ECTSI2.740e-2086.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E2_9PHAE5.070e-1780.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7P3_9PHAE2.680e-1575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U2_9PHAE3.280e-1475.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78035contigEcto-sp13_S_contig78035:420..611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78035.19058.1mRNA_Ecto-sp13_S_contig78035.19058.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78035 324..611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78035.19058.1 ID=prot_Ecto-sp13_S_contig78035.19058.1|Name=mRNA_Ecto-sp13_S_contig78035.19058.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
PRWRGFARRRVDDELATLVADEPPRAAKQSPLAKALLKTAVENPKGVRSL
LKEQAVTAAQACG*
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