mRNA_Ecto-sp13_S_contig78.19051.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A6H5JS48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS48_9PHAE) HSP 1 Score: 899 bits (2322), Expect = 0.000e+0 Identity = 512/623 (82.18%), Postives = 520/623 (83.47%), Query Frame = 3
Query: 297 MENEQETKRRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMR-------------------------VTKKLHGSKGMGKRLYRRAQDSHPASMDAVAHELKVLEERLAAKLLANSDGWPGLMDRRAAQKAASAPSLLGTGRRDGLAGVSTGALREPRPPERAGSGKAGYVGGDVGAPGGSGHKKQRHPSIVKVLPRLDHRRRPSTGTALAAPPTSTPKSAAGEAATGVHCRRASSDTSCGVTEAPPRHRRRRIYSVGEAFQTNPSKQHHRQYLSQRTEQKRDHEVATTTDGGGGELPSPVRSPAVPLSLLGPTASTNRVEDDXXXXXXXXXXGYVAGDASESERRSTAAFIAAVELIDNAGPVHLGSGLGGCDDVGATGGDGTSPFFHGGGSFSSYRSDSGYSSLLSSAQGESGSRLGIDRVGSTTSTDHRDVTLRTADPATTVDPNQPPTREQQQKGNTHVHSLYGREIPPEAELGYAVAPAPRLDQYAVRRASAAGGNGPGGSDADCCSSLGHSAIQRXXXXXXXXXXXX----ELPCTAWPWFDSQRLRGGVSGITPTPASIKPECQGLCEGGNDTERTEGGSGATTASEEAASSSIVTGVDNWQ 2078
MENEQE KRRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMR VTKKLHGSKGMGKRLYRR QDS+PASMDAVAHELKVLEERLAAKLLANSDGWPGLMDRRAAQ+AASA SLLGTGRR GLAGVSTGALREP PPERA SGKAGYVGGDVGAPGGSGHKKQRHPSI KVLPRLDHRRRPSTGTALAAPPTSTPKSAAGEAATGVHCRRASSDTSCGV EA P+HRRRRIYSVGEAFQT SKQHHRQYLSQR LPSPVRSPAVPLS L PTAST ED XXXXXXXXX GYVAGDA ESERRSTAAFIAAVELIDNAGPVHLGSG GGCDDVGAT GDGTSPFF GGGSFSSYRSDSGYSSLLSSAQGESGSRLGID V STTSTDH DVT RTADPATTVDP+QPPTREQQQKGNTHVHSLYGR+IPPEA LGYA+ PAPRLDQYAVRRASAAGGN G SDAD SSLGHSAI+R XXXXXXXX ELPC AWPWFDS RLRGGVSGITP PAS KPECQGLCEGGNDTERTEG S+VTGVDNWQ
Sbjct: 1 MENEQEPKRRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRGIFQRTRRCSNVPPPARLESFCRVQVTKKLHGSKGMGKRLYRRVQDSNPASMDAVAHELKVLEERLAAKLLANSDGWPGLMDRRAAQEAASASSLLGTGRRGGLAGVSTGALREPLPPERARSGKAGYVGGDVGAPGGSGHKKQRHPSIAKVLPRLDHRRRPSTGTALAAPPTSTPKSAAGEAATGVHCRRASSDTSCGVMEATPKHRRRRIYSVGEAFQTKQSKQHHRQYLSQRXXXXXXXXXXXXXXXXXXGLPSPVRSPAVPLSFLDPTASTTHGEDXXXXXXXXXXNGYVAGDARESERRSTAAFIAAVELIDNAGPVHLGSGFGGCDDVGATSGDGTSPFFDGGGSFSSYRSDSGYSSLLSSAQGESGSRLGIDGVASTTSTDHCDVTPRTADPATTVDPSQPPTREQQQKGNTHVHSLYGRKIPPEAALGYAMVPAPRLDQYAVRRASAAGGNASGSSDADYYSSLGHSAIERQRVQXXXXXXXXXXXXELPCMAWPWFDSPRLRGGVSGITPPPASTKPECQGLCEGGNDTERTEGXXXXXXXXXXXXXXSMVTGVDNWQ 623
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: D8LT55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT55_ECTSI) HSP 1 Score: 107 bits (268), Expect = 8.070e-25 Identity = 51/56 (91.07%), Postives = 54/56 (96.43%), Query Frame = 3
Query: 297 MENEQETKRRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMR 464
ME+EQE KRRGRWIVEEE+FARACINAFS GMLA+VEDGTTLRAFLASRLHCQPMR
Sbjct: 1 MESEQEPKRRGRWIVEEEDFARACINAFSSGMLAEVEDGTTLRAFLASRLHCQPMR 56
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: W2PFT2_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PFT2_PHYPN) HSP 1 Score: 82.8 bits (203), Expect = 2.690e-13 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPASMDAVAH---ELKVLEERLAAKLLANSDGWPG 626
R G+W EEE F I+ F G+L DVEDGT+LR +LA RL+C+ MRVTKKL G +GK+++R A ++ PAS A+ H EL V+E R L + G PG
Sbjct: 116 RSGKWTPEEEAFTNTIIHYFKRGLL-DVEDGTSLRWYLAKRLNCEAMRVTKKLKGDSSIGKQIFR-AVENTPASRQAIRHAREELAVMEARFLESLSGSGVG-PG 217
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A6A3U4H6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U4H6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.840e-13 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPASMDAVAH---ELKVLEERLAAKLLANSDGWPGLMDRRAAQKAASAP 668
R G+W +EEE F I+ F G+L DVEDGT+LR +LA RL+C+ MRVTKKL G+ +GK+++R A ++ PA+ A+ EL V+E R L A G PG +Q ASAP
Sbjct: 130 RSGKWTMEEEAFTNMIIHYFKRGLL-DVEDGTSLRWYLAKRLNCEAMRVTKKLKGNSSIGKQIFR-AMENTPANRQAIRRAREELAVIEARFLESLSAGGVG-PG------SQHVASAP 239
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A7S2GE85_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE85_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.430e-13 Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 3
Query: 318 KRRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSH 533
KR+G+W VEEEE+A I+ F G+L ++ DGTTLR++L+ +L C PMR+TKK G+ +GK+ Y+ A+DSH
Sbjct: 20 KRKGKWTVEEEEYASCIIDYFEQGLL-ELPDGTTLRSYLSKKLGCHPMRITKKFTGTLRIGKKTYKCAEDSH 90
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A484E2Y4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2Y4_BRELC) HSP 1 Score: 81.3 bits (199), Expect = 8.060e-13 Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPASMDAVAH---ELKVLEERLAAKLLANSDGWP 623
R G+W +EEE F I F G+L DVEDGT+LR +LA RL+C+ MRVTKKL G+ +GK+++R +++ PA+ A+ H +L V+E R L + G P
Sbjct: 122 RSGKWTLEEEAFTNMIIYYFKRGLL-DVEDGTSLRWYLAKRLNCEAMRVTKKLKGNSSIGKQIFRSIENT-PANRQAIRHAREDLCVVEARFLESLSGSGGGLP 223
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A2P4X7P4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7P4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.000e-12 Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPASMDAVAH---ELKVLEERLAAKLLANSDGWPG 626
R G+W EEE F I+ F G+L DVEDGT+LR +LA RL+C+ MRVTKKL G+ +GK+++R A ++ PA+ A+ EL V+E R L A G PG
Sbjct: 23 RSGKWTPEEEAFTNMIIHFFKRGLL-DVEDGTSLRWYLAKRLNCEAMRVTKKLKGNSSIGKQIFR-AMENTPANRHAIRRAREELAVVEARFLESLNAGGVG-PG 124
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: D7FME2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME2_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 1.060e-12 Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYR---RAQDSHPASMDAVAHELKVLEERLAAKLLANSDGWPGLM 632
R+G+W EEE I+ FS G+L + DGTTLRA+LA +L C PMR+TKK G+ +GKR+Y R ++ + AV EL LE R A+L N + G++
Sbjct: 9 RKGKWTSEEEALTARIIHYFSLGVL-QLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAV-EELAELEARFQARLERNKEKRTGIL 113
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A6G0WJF1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.130e-12 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPA---SMDAVAHELKVLEERLAAKL 599
R G+W VEEE F I+ F G+L D+EDGT+LR +LA +L+C+ MRVTKKL G+ +GK+++R A D P S+ EL++LEE A L
Sbjct: 59 RSGKWTVEEEVFTNKMIHFFRLGLL-DIEDGTSLRWYLAKKLNCEAMRVTKKLKGNHSIGKQIFR-ALDLMPETTKSIQKAEQELQLLEEAFVASL 152
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Match: A0A835Z4F5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4F5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.290e-12 Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 3
Query: 321 RRGRWIVEEEEFARACINAFSCGMLADVEDGTTLRAFLASRLHCQPMRVTKKLHGSKGMGKRLYRRAQDSHPASMDAVA---HELKVLEERLAAK 596
RRG+W EEE + I+ F+ G+L + +GTTLRA+LA +L C PMR+TKK GS +GKR+Y + + PAS D + +L LE R A+
Sbjct: 2 RRGKWSSEEEAYTERIIHYFNTGVL-QLPEGTTLRAYLAKKLQCDPMRITKKFTGSSCLGKRVYHSCERT-PASPDEITASKEDLSQLEARFLAQ 94 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78.19051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig78.19051.1 >prot_Ecto-sp13_S_contig78.19051.1 ID=prot_Ecto-sp13_S_contig78.19051.1|Name=mRNA_Ecto-sp13_S_contig78.19051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=666bp MLITRLCIHMASRCLLTTYLLQLTPFICLHDKPKERMFFVSTPARHSYHHback to top mRNA from alignment at Ecto-sp13_S_contig78:39041..42764+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig78.19051.1 ID=mRNA_Ecto-sp13_S_contig78.19051.1|Name=mRNA_Ecto-sp13_S_contig78.19051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3724bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78:39041..42764+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig78:39041..42764+ >mRNA_Ecto-sp13_S_contig78.19051.1 ID=mRNA_Ecto-sp13_S_contig78.19051.1|Name=mRNA_Ecto-sp13_S_contig78.19051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1998bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78:39041..42764+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |