|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig78.19048.1 vs. uniprot
Match: D7FWS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS0_ECTSI) HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0 Identity = 540/795 (67.92%), Postives = 621/795 (78.11%), Query Frame = 1
Query: 115 MASEMKEPTLVGEIVTFSPTNFVYLCNNKSLGVGQPNHMKNPNAFDHTIACSFADSVVACGAMSETTLMILSPASTEWATTETWLSGTMAALGHLPGTSRERTEMEGRIRAL-QAKGAKPTWEETIEATLWDYNTFGPPTSTEFNDTRPEFVAVQGQHRAAILNAVFATELGLSQSRGGDLRGGLFTDDDRSAKMPILKEKLENVKMFVKVYDFLTHDDAEEVGRRQRTVEKTTTDVSFLDVSTSLGVLVKQIFNPRAEICGGRAKEIFGDEWQKIMTSKSRKKQQAVIRKSLMKRVNNTIQKQLGLNPQGKNYFAVCVYAFALHPERPSLQLLRQYFHDQNAQVVKAKAAKIKSIGRAGKHSAGEGSGDADKASATGHAPHRITVTSMGAFFSLTPYSQNTQLVKDLVRERGLCDEFRTVCFHHFVVLEVVRAMVTGLTTRRNCSDDPHPCTDKDTVIPIPPETSDLYLILKTFVSVEEGAVVASEGQDFISGMHHEVDLWIPHLVSFALE-LQNQGPLLTGSFKLTKKPLTKSLNRRVNVFKSG-NQQGLNPSNSSNLTPGWGVQLHMSTSGTEPDYTKRTWDDWFTDDIRGDDGELTTNYMHRMVATVFGLLIVDRSLVGLSSRHKLTDRLGKFRELLGAIPAVGAGARLKALLKNQEAVKGKLQAKDQSFFGKDRLALLFGGDQAHGGGRVKSCSELGPSDEGTSSDSSSDVXXXXXXXXXXXXXXXXXXSKGHQEKFAVSIIRDAGDRDADEVSVRWPNSVVKQLGLLDDDGELKCSNGVFRFHITKEAT 2490
MAS EPT GE+VTF PT FVY CNN+SL G+ NHMKNPNAFD IA SFADSVV+CGAMSETT MILSPAS W TTETWLS TM ALGHLP TS ER EME RI AL QAKG + TW+ETI+ATLWDY +GPPT+ EFN RPEFVAVQGQHRAA+LNA FAT+LGLS SRGGDL+GGLFTDDD + KMP LK +LE +K+ V VY FLTHD AEEVGRRQRTVEKTTTDV+FLDV+ S G LV+Q+FNP +IC RAKE FG +W+ IM + ++ +Q VIR+ L+ RV+ ++KQLGL QGK+ FAV VYA AL PERPSL+LLR+YF+DQNA+VVKAKAAK+KS+ RA KHSAGEGSG D AS T + PH ITVT+MGAFFSLT YSQ+TQLV+DL+ E+GL ++FRT C+ HFVVLEVVRAMVTGL TRRNC DDPHP D +TVIP+P ETS+L+ +LKTFVS EEGA VA G+ FIS MH EVD W+PHLV F+LE GP ++G+F + K LT SLNRR F + + +NPSN SNLTPGWGV+ MSTSGTEPDYT RTWDDWFT IRGD GEL YM+RMVATVFGLLIVDR LVGLSS H L +R GKFR+LLGAIPAVGAGA+LKALLKNQ+AVK LQ DQSFF +DRLALLFG +QA GG VK+ +E SDEG+S+DS SDV SK QEKFAVSI+RD+G+ DA EVSVRWP SVV QL LLDDDGELKCS+G+FRF+I KEAT
Sbjct: 1 MASATMEPTSGGELVTFKPTEFVYTCNNESLAEGKRNHMKNPNAFDPAIARSFADSVVSCGAMSETTFMILSPASKTWGTTETWLSETMKALGHLPETSDERREMESRISALIQAKGPEATWDETIKATLWDYAAYGPPTNIEFNAARPEFVAVQGQHRAAVLNAAFATDLGLSLSRGGDLQGGLFTDDDCATKMPTLKGQLEKMKISVNVYSFLTHDQAEEVGRRQRTVEKTTTDVTFLDVAKSQGDLVRQVFNPNKKICRERAKEAFGPKWRHIMKNGGKRGEQKVIRRDLVNRVHEAMRKQLGLENQGKSSFAVYVYALALDPERPSLRLLRRYFNDQNAKVVKAKAAKVKSVVRASKHSAGEGSGHEDHASGTDYTPHSITVTAMGAFFSLTSYSQDTQLVQDLLMEKGLTEDFRTQCYRHFVVLEVVRAMVTGLVTRRNCLDDPHPYKDNETVIPVPAETSELFSLLKTFVSEEEGAAVAIAGKAFISSMHQEVDFWVPHLVRFSLEETDKNGPFMSGTFNVPKSALTMSLNRRTTAFTHDLSTENVNPSNKSNLTPGWGVEPFMSTSGTEPDYTPRTWDDWFTFQIRGDRGELDPKYMYRMVATVFGLLIVDRKLVGLSSGHMLAERRGKFRDLLGAIPAVGAGAKLKALLKNQKAVKAYLQVDDQSFFAEDRLALLFGDNQATGGKSVKASAERESSDEGSSADSXSDVDDSAPKRG----------SKEPQEKFAVSIVRDSGNNDASEVSVRWPKSVVSQLNLLDDDGELKCSDGIFRFNIEKEAT 785
BLAST of mRNA_Ecto-sp13_S_contig78.19048.1 vs. uniprot
Match: D7G2U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U1_ECTSI) HSP 1 Score: 714 bits (1844), Expect = 6.630e-240 Identity = 407/788 (51.65%), Postives = 514/788 (65.23%), Query Frame = 1
Query: 298 AMSETTLMILSPASTEWATTETWLSGTMAALGHLPGTSRERTEMEGRIRALQAKGAKPTWEETIEATLWDYNTFGPPTSTEFNDTRPEFVAVQGQHRAAILNAVFATELGLSQSRGGDLRGGLFTDDDRSAKMPILKEKLENVKMFVKVYDFLTHDDAEEVGRRQRTVEKTTTDVSFLDVSTSLGVLVKQIFNPRAEICGGRAKEIFGDEWQKIMTSKSRKKQQAVIRKSLMKRVNNTIQKQLGLNPQGKNYFAVCVYAFALHPERPSLQLLRQYFHDQNAQVVKAKAAKIKSIGRAGKHSAGEGSGDADKASATGHAPHRITVTSMGAFFSLTPYSQNTQLVKDLVRERGLCDEFRTVCFHHFVVLEVVRAMVTGLTTRRNCSDDPHPCTDKDTVIPIPPETSDLYLILKTFVSVEEGAVVASE---------------------------GQDFISGMHHEVDLWIPHLVSFALELQNQGPLLTGSFKLTKKPLTKSLNRRVNVFKSGNQQGLNPSNSSNLTPGWGVQLHMSTSGTEPDYTKRTWDDWFTDDIRGDDGELTTNYMHRMVATVFGLLIVDRSLVGLSSRHKLTDRLGKFRELLGAIPAVGAGARLKALLKNQEAVKGKLQAKDQSFFGKDRLALLFGGDQAHGGGRVKSCSELGPSDEGTSSDSSSDVXXXXXXXXXXXXXXXXXXSKGHQEKFAVSIIRDAGDRDADEVSVRWPNSVVKQLGLLDDDGELKCSNGVFRFHITKEATRGTTKKRKKSTAADIRVGKETKRQKTTAQP 2580
AMSETT M+L PAS EWATT+TWL GT+ AL H TS+ER +MEGRI L + KP+W +TIE +YN FGPP + +FN TRP+FV+VQGQHRAA+LN FA++LGLS SRGGDL GGLFTD +R AKM LKE+L ++ + V V+DFLTHDDAE VGRRQRTVE TTTDVSFLDVSTS G+LVKQ+FNP +IC R E FGD+W+ + + +++K I+KSL+ R+ ++ QLGLN Q + F+V V+ +AL PERPS+++LR+YF DQNA+V+KAKAAK+K + GKHS G + D ASAT + PH I+VT+MGA FSLT YSQ + LV+D++ + GL ++FR CFHH VLEVVRAMVTGL +RR+CS DP P IP E LY +L TFVS EE + E DFI ++ EVDLW+P LV FAL+L+++ P+LTG FK K LT SL RRVN F+S N G NPSN++NL PGWG + HMSTSG+EPDYT RTWDDWFT DG+ ++H +ATVFGLLIVDR L L S+H L KFREL+ AIP VG A LK LL+ + VK LQ ++SFF ++RLALL ++ S++G+ D SD+ ++ FAV++I D + D S+RW +V+QLGLL DDGEL CS GV RF I K+ATR +KKRK ST+ADIR G ETKR K T +P
Sbjct: 7 AMSETTFMVLCPASREWATTKTWLGGTLEALKHFEETSQERLDMEGRITNLLERSTKPSWGDTIE----NYNRFGPPANDQFNKTRPQFVSVQGQHRAALLNYAFASDLGLSLSRGGDLDGGLFTDAERPAKMSTLKERLRDINISVNVHDFLTHDDAETVGRRQRTVEATTTDVSFLDVSTSQGLLVKQLFNPEDDICQDRVMEAFGDDWRSTLKNPNKRKDAENIKKSLVDRIKTAMKLQLGLNSQRRGIFSVFVHTWALQPERPSIEILRRYFEDQNAKVIKAKAAKVKLVAGKGKHSTRAGRDEPDDASATEYTPHGISVTAMGALFSLTAYSQASTLVQDMLYKGGLSEDFRIACFHHCTVLEVVRAMVTGLLSRRHCSPDPTPYDTGKGPPTIPAELRCLYNLLHTFVSEEEAQAFSEECXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFIHSIYQEVDLWVPPLVRFALKLKDK-PVLTGEFKANKLALTASLFRRVNAFQSSNAGGTNPSNNNNLPPGWGKKPHMSTSGSEPDYTTRTWDDWFTYKPHEKDGQYCARFLHNTMATVFGLLIVDRILGALRSKHNLPSN--KFRELVRAIPEVGEIATLKGLLQKPKTVKRGLQVGEESFFDEERLALL---------------AQRESSNDGSGDD--SDIRL--------------------EKPFAVTVIDD--EEDDKLSSMRWTTEIVQQLGLLGDDGELTCSEGVLRFTIAKDATRDLSKKRKASTSADIRQGDETKRPKKTNRP 748
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 3316 |
| Hectar predicted targeting category | signal peptide |
| Exons | 10 |
| Cds size | 3315 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464050.082797-CDS-Ecto-sp13_S_contig78:10050..10162 | 1681464050.082797-CDS-Ecto-sp13_S_contig78:10050..10162 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 10051..10162 - |
| 1681464050.0955503-CDS-Ecto-sp13_S_contig78:10450..11164 | 1681464050.0955503-CDS-Ecto-sp13_S_contig78:10450..11164 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 10451..11164 - |
| 1681464050.107871-CDS-Ecto-sp13_S_contig78:11759..12078 | 1681464050.107871-CDS-Ecto-sp13_S_contig78:11759..12078 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 11760..12078 - |
| 1681464050.1231844-CDS-Ecto-sp13_S_contig78:12648..12952 | 1681464050.1231844-CDS-Ecto-sp13_S_contig78:12648..12952 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 12649..12952 - |
| 1681464050.1354413-CDS-Ecto-sp13_S_contig78:13089..13746 | 1681464050.1354413-CDS-Ecto-sp13_S_contig78:13089..13746 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 13090..13746 - |
| 1681464050.1551409-CDS-Ecto-sp13_S_contig78:14015..14408 | 1681464050.1551409-CDS-Ecto-sp13_S_contig78:14015..14408 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 14016..14408 - |
| 1681464050.1750083-CDS-Ecto-sp13_S_contig78:15152..15292 | 1681464050.1750083-CDS-Ecto-sp13_S_contig78:15152..15292 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 15153..15292 - |
| 1681464050.1868875-CDS-Ecto-sp13_S_contig78:16109..16281 | 1681464050.1868875-CDS-Ecto-sp13_S_contig78:16109..16281 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 16110..16281 - |
| 1681464050.199202-CDS-Ecto-sp13_S_contig78:16933..17020 | 1681464050.199202-CDS-Ecto-sp13_S_contig78:16933..17020 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 16934..17020 - |
| 1681464050.211383-CDS-Ecto-sp13_S_contig78:17340..17757 | 1681464050.211383-CDS-Ecto-sp13_S_contig78:17340..17757 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig78 17341..17757 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig78.19048.1 >prot_Ecto-sp13_S_contig78.19048.1 ID=prot_Ecto-sp13_S_contig78.19048.1|Name=mRNA_Ecto-sp13_S_contig78.19048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1105bp
KRENKTIFLFLFLSVADGSYSSTVSCNPSLKGRRVVEVMASEMKEPTLVG
EIVTFSPTNFVYLCNNKSLGVGQPNHMKNPNAFDHTIACSFADSVVACGA
MSETTLMILSPASTEWATTETWLSGTMAALGHLPGTSRERTEMEGRIRAL
QAKGAKPTWEETIEATLWDYNTFGPPTSTEFNDTRPEFVAVQGQHRAAIL
NAVFATELGLSQSRGGDLRGGLFTDDDRSAKMPILKEKLENVKMFVKVYD
FLTHDDAEEVGRRQRTVEKTTTDVSFLDVSTSLGVLVKQIFNPRAEICGG
RAKEIFGDEWQKIMTSKSRKKQQAVIRKSLMKRVNNTIQKQLGLNPQGKN
YFAVCVYAFALHPERPSLQLLRQYFHDQNAQVVKAKAAKIKSIGRAGKHS
AGEGSGDADKASATGHAPHRITVTSMGAFFSLTPYSQNTQLVKDLVRERG
LCDEFRTVCFHHFVVLEVVRAMVTGLTTRRNCSDDPHPCTDKDTVIPIPP
ETSDLYLILKTFVSVEEGAVVASEGQDFISGMHHEVDLWIPHLVSFALEL
QNQGPLLTGSFKLTKKPLTKSLNRRVNVFKSGNQQGLNPSNSSNLTPGWG
VQLHMSTSGTEPDYTKRTWDDWFTDDIRGDDGELTTNYMHRMVATVFGLL
IVDRSLVGLSSRHKLTDRLGKFRELLGAIPAVGAGARLKALLKNQEAVKG
KLQAKDQSFFGKDRLALLFGGDQAHGGGRVKSCSELGPSDEGTSSDSSSD
VGEPDRKRDGVGEPARKRGSKGHQEKFAVSIIRDAGDRDADEVSVRWPNS
VVKQLGLLDDDGELKCSNGVFRFHITKEATRGTTKKRKKSTAADIRVGKE
TKRQKTTAQPREERGETTKRSASPTPTTKDQTKNAKGKEKASGGLEEREE
GEEDKSDQSNDDSYDDALGQGGGEVEGNDQREEQDDADTDFLLLDGEPGN
GRVYDADGDKVREEMEAEEGHTNFRSDTFPPSGPSSGEVPPIPNPSAPPT
GTPSAEPLAEEDQTNLHPDTFPPPVKTSPAPTPSAPPTGTPSVKPPAKPS
AEPSAVTCASRRDDNDHVTRVNEAVKKAKIYPTQNDGGFSEFFKVRSKDV
FCSV* back to topmRNA from alignment at Ecto-sp13_S_contig78:10051..17757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig78.19048.1 ID=mRNA_Ecto-sp13_S_contig78.19048.1|Name=mRNA_Ecto-sp13_S_contig78.19048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7707bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78:10051..17757- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCGAGAGAACAAAACGATTTTTCTTTTTTTGTTTCTTTCAGTTGCGGA
TGGCTCCTACAGCAGTACAGTGTCGTGCAACCCTTCATTGAAGGGTCGGC
GCGTGGTGGAAGTCATGGCTTCGGAAATGAAGGAGCCAACCTTGGTGGGG
GAAATTGTCACGTTCAGCCCAACCAACTTCGTCTACCTTTGCAACAACAA
GTCGTTGGGAGTTGGACAGCCCAACCACATGAAGAATCCAAACGCCTTCG
ACCACACCATCGCCTGCTCGTTTGCGGACTCCGTTGTTGCCTGCGGTGCC
ATGTCGGAAACAACGTTAATGATCCTATCTCCAGCGTCGACGGAGTGGGC
AACAACGGAGACGTGGCTCAGCGGGACGATGGCGGCGCTCGGGCACTTGC
CGGGAACAAGCAGAGAGGTGGGAGTTCTTACTTGTATAGTTTTCGATATA
TATCTCGAAATTTTAAACCTGATGTATCCCATGTGCAGCACGACAATCGA
ATGGGAGGCCTCGGATCTCCAGAGGTGACAAGCCGTATCTCTTGGGGAGA
TACTGGTTGGGCGCAGGCGAGAAGCGCTATCTCTTGCTTTGTCCCTCGCA
AATTGTAGTTGAGATGTCTCACTCAGTCTTTTTCCGTTCAGCTATTATAC
CACACGCAGTCTCCCAGAGAAAAACAAACACAAAGCAGTCCCAACTTCCC
GAACATGCCGAACACCTCGTTCTCGCGCATGCCGCAGCGGACCGAGATGG
AAGGCAGGATCAGAGCTCTACAGGCCAAGGGCGCTAAGCCTACGTGGGAG
GAGACGATAGAGGCAACATTGTGGGTGAGCCGTCGTTAAGGTCTGCTGTC
GTTAGGTTCTTCCAAGCTGTGCACGCGAATGTCTTCCGTCGCTCTTCCTC
GGTTGACGAAATTGCAATTCCTCCTGCAAGTTGGCAACCTCGACCTGACC
GCCGTCACCCATGATTGAAAGAATGCGTCACACAGTACGCGGACTTTAGA
CGGCGATGAAAGTTCACCACGAGTGCGTTATAGAAGGAACACATATCGAC
AACGCACCGCTGTCTTTCCCTCTTTGTCCTTCTCCCCCGAAAGCGGGGCC
CCGAAAGCGGGGGTACGTTGACAAAATGCCAATCAACGAGGTACACAGGT
GGTGGAAAATTATCACATCTGTAGGCCTCAGTGAGAAAATTGGCTAATTA
GAGTCCAGGTATGTTGGAACTCTGTGGTGGGTTGTAGGCTGATTGCCAGC
ACCTGATGCCCACTAAACGCGAACATACATGTGTGATTGCAGTTGAAGAA
AGTGGAGGCTGGTCACACACGGAAGACGTGCCATTTGCGCATGTATTCAG
CCCAGTACTTAGTGTATATCGCATTTGGTGGAATTTCGACCCACATTTTT
CCCGTTGTCTTTTGACCATTTGCTGATTTCCGGTGGATTGCCTCCTTGTG
ATGATGTACTTCGTACCATCTGGCAGGACTACAACACGTTTGGACCACCA
ACCAGCACTGAGTTCAACGATACGCGGCCGGAGTTTGTGGCGGTGCAGGG
ACAGCACCGCGCAGCGATACTCAATGCAGTGTTTGCCACCGAGCTAGGAT
TATCGCAAAGTCGCGGAGGAGACCTCCGGGGCGGGCTTTTTACAGACGGC
AAGGCTTATCTTTTTTTAATTTAGTTATTTACTTAACATGACACAACGAA
TCCATCTCTCTGTATTCACAAGATAGATATAAAGTGTCAGATAGACGCTA
CTTGTATTTCCACGATTTCCCGAGCAGCACACAGATTGTATTTCCCCTAT
CGGCAACAGGCTCAACAAGCCGGTTTGGTAGCCATCTTGGGCATCTGCCT
GTTTGCTATGCTGTGAAGGTATCGACGAAAGGTGTCGGATTAAGCCGGTT
TGTCGGATGTGCTACTCATGGCACCCTGAGATGGTTGCGAACCTCGGAGT
CATGCGCGTGACCACAGCACATAAAAGGGTGGTTTGTGGTGTGTCGAGGG
GGCAGGGCAGGCGTAGGATCGTTGTGGTGCGCCAGGTCATGGTCGTTTGA
GGCGCCTGGTCCGCATAGCCTCCGTCTATTCATTCTTGGGTGCCCATCAT
AGTACCAACCTGAGAGCACCGTAGTGAATTCAAATTTTCGGGTGCGGTAG
AGAATCGGTGCATGTGGTCCTGTGCCAAGACCGACTTGGACAAGTGACAA
CAAGGAGATTTATGTTTCGGGAAGGGCTGCTGACAACTTGCTCTTCAACA
CCAATCGCTGCCAAGATAGTAGGCCTCTGCATGGTGTCATCATTTAGGAA
TTTCCCCTACGAATGCCATGTAGAGTAGAAAATATCACATCTTTCGTGCA
CCCTATTCCGCGAATCTCTATGCACGGGAAGGGAATGTATGCGTATCCGC
ATCGTATCCCCACGATGCTGGAACATCGCCATTGTCGCTGGGTGTCGTTC
ATTCTGGTCCGGCAGACGACAGATCAGCTAAGATGCCTATCCTGAAGGAA
AAGCTGGAGAACGTGAAAATGTTCGTGAAAGTCTACGATTTTCTCACCCA
TGACGACGCTGAGGAGGTGGGGAGACGCCAGCGCACGGTCGAGAAGACCA
CCACGGTGAGCTCAGCTGCTTGAGAGGGTAAACCGTTGGCACCTTGGACC
CCGGATAATAAGCATGTATCTAGCGGGTTCTGGTAAAGGCGAACCTGATA
TAGAAAAAAAATTGGCCGGGACTGCAACAACTCATTCTACTTGTCTTCGA
GAAATCTAACGTAGATATCAACGTTGGCTGGGTCTGACTGCAACTATTCC
TCCTCATCTTCGGGATACCTGATAGAGATATAACCTTTGGCCGGGTGCCC
GTAACTGCTCCTCCTTTTCTTCGGGATACCTGGTAGAGATATAACCTTCG
GCCGGGTGCCCGTAACCATTCCTGTTTTTTCGGGAAACCTGATAGAGAAG
ATAGAAACTTCGGCCGGTTGCGGGGAAATACTCCTCCTTTTCGTCGGGAG
ACCTGATAGATATATAAAATTCGGCGGGTGCAACTACTCCCTCATTTCTT
CGGGCCGTGTGTTTACGGATCTCACAGCGCACGCCTCGCTTTTTGGGAGC
TCAGGACCCTGTCACTGTCATGCACACTTCGTGTGCACAGGGCTCAATAC
GTTGAACATACCACCCATTTGTGTAATGTGGAGTGATTTACATGAAACCT
CGCGTCTCTTGAAGCCGCTAACGTGTTTGTGCTCGCGTTGCCAAACCTCG
TCCCGTTCGCTGTCTTGAGAGCAAACGAAACCAAATGAAACCTCTCAGAT
CGTTCCCAGCCTAAACAATTTTACTTTGTCTCGTACGTTGTTCGAACAGG
ATGTCTCTTTCTTGGACGTCTCCACAAGCCTGGGGGTGCTCGTCAAACAG
ATATTTAACCCACGTGCTGAAATCTGTGGTGGTCGTGCGAAGGAGATTTT
TGGCGACGAGTGGCAGAAGATAATGACGAGCAAAAGCCGAAAGAAGCAAC
AGGCGGTCATCAGGAAGAGCCTCATGAAGCGTGTCAACAACACGATTCAA
AAACAGCTAGGGTTAAATCCCCAAGGCAAAAACTATTTCGCCGTCTGCGT
GTATGCCTTCGCGTTGCACCCGGAGAGGCCCTCGCTCCAGCTCCTTCGAC
AATACTTCCACGACCAAAACGCACAGGTGGTCAAGGCGAAGGCAGCCAAG
ATCAAGAGCATAGGGCGAGCAGGGAAACACTCTGCCGGAGAGGTGCGTCA
CCAGGCGTTTAATCGTATCCACGTTTTCTATGCCTTTATATATCGTGTAT
GTCGTGCGACCGGTTTTGGTGATGTATTACATGTTTGTATGCCAATCGGC
CATGTCGAGCGCTACGCAAGTGAGTACAGTAGCCCTTCACCTCCTGCTTA
GCACGGTTCGCCTGCTGGTATCATTCAACAACACGTTTGTCAGGTTGTTG
GACTAAACTTCAACATCGTTGCGCTTCCTCTCTTGCCCATACCACAACGT
TTGTTTGTTAGGGATCCGGGGACGCAGACAAAGCTTCTGCCACGGGCCAT
GCACCGCACCGCATCACCGTTACTTCGATGGGAGCCTTCTTTTCGCTTAC
ACCCTACAGTCAGAACACTCAGCTCGTCAAGGACCTAGTGCGGGAGCGGG
GTCTATGCGACGAATTTCGGACAGTGTGCTTTCACCATTTCGTCGTCCTC
GAAGTCGTGCGGGCTATGGTCACTGGGTTGACGACGCGGAGAAACTGCTC
CGACGACCCTCACCCTTGCACGGACAAGGACACCGTTATTCCGATACCCC
CCGAGACGAGCGATCTCTACCTCATACTGAAGACCTTTGTCAGTGTGGAG
GAGGGTGCTGTTGTTGCCAGCGAAGGCCAAGACTTCATCAGCGGCATGCA
CCATGAGGTAGACCTCTGGATTCCGCATCTAGTGAGTTTTGCACTCGAGC
TCCAGAACCAAGGACCGTTGCTGACCGGGAGTTTCAAACTCACAAAAAAG
CCTCTGACGAAGTCGTTGAACAGGAGGGTGAACGTCTTCAAATCGGGCAA
TCAGCAGGGCCTCAATCCCTCCAACTCTTCAAACCTTACACCTGGGTGGG
GTGTACAACTGCACATGTCGACATCCGGAACGGAGCCCGACTACACCAAG
CGGACGTGGGACGACTGGGTACGTAATGCCTGTCGTTTATTGTGTCGACA
TGTGAAAAAAATGTAGTCACCAGCGAGCTCTCCCCCATTTGATACGTTCT
CACTGACTAACTGAGGACAGGCCTCTTTTCCGCCTCCTGTTCTTGATGCG
CACAGTTCACGGACGACATACGGGGAGACGATGGCGAACTCACTACCAAC
TACATGCACCGCATGGTTGCAACAGTGTTTGGTCTGCTTATTGTCGACCG
GAGCCTCGTGGGGCTGTCCTCCAGGCACAAGCTTACGGACAGGCTAGGCA
AGTTTCGTGAACTGTTGGGGGCTATCCCAGCTGTCGGCGCGGGAGCGAGA
CTGAAGGCGCTTCTGAAGAACCAAGAGGCGGTGAAGGGCAAACTCCAAGC
GAAGGACCAGTCCTTCTTTGGCAAAGATCGCCTTGCCCTCTTGTTTGGTG
GCGATCAAGGTGAGAAACGTTGTGGGTCGATACGTCAGTAGAGGGAGATC
TTTCCATCAGAAGATGCGCATGTTTTAAGTTGCACATGATCTGAGGTGGC
ATGTGCATGTGGTCATCCTTGTATACTCTAGCCAGCAAACACTTCGGTCG
TTGTAAATTTTGGTAGTGAATCACCGGCGCCATGCTTCGGGAACATCTCC
ACCATTTGCTACTTTAGTTGCTGTCATCGCACGTAAAGCTAATTGCTGAA
CATGTGGTCTTCTCACGGAATTTTTTGTCACCGACGAATTCAGCACCACT
TCAGCACGCCCAATGTTTTGTGCAGGGCGCAATCTTGTGTGGTCGACTAA
AAAAAATCTCAGAAAACCCTGTTGTTCATTGGTATTTGCAACCTACCGAT
CTTACGAGATAGCTCACCAAGTGTCCCAATTGCACTCGGCTAGTTATGTG
CAATTTTTATGTACAGAAGTCTTGGTTGCTCGTTTTTGGCGGCTTCTATG
CATTCTGGAAAACTTAGTTAGCCTCCGTGTCGCCTCCGTGTCCATCCCGT
TTCTTCATGTGTATCTTCTCAACTCCCAGCGCATGGGGGGGGGAGGGTGA
AGTCATGTTCCGAACTGGGTCCCTCGGACGAGGGGACGTCGTCCGACAGC
AGCAGCGATGTGGGTGAGCCTGACCGCAAGCGCGACGGAGTGGGTGAGCC
TGCTCGCAAGCGCGGCTCGAAAGGACACCAGGAAAAATTCGCCGTTTCTA
TCATCAGGGATGCCGGCGACCGCGATGCTGACGAAGTCTCGGTTCGCTGG
CCCAACAGTGTGGTCAAACAACTTGGCCTGTTGGACGATGACGGAGAGCT
CAAGTGTTCCAATGGCGTCTTCCGTTTCCACATTACGAAAGAGGCAACGT
GAGTGCAACTTAAATACGTTAAAATTTTCGATTTTATAGTACGATAGCGT
TGTACCCTCTCAATTGTTTACAGGGTAATTTGCGGAGTGTAGCCTTTGGG
GTTAGGGTTAGGTTGTTGTTGTTGTTGTTGTTGTCTTGACATACAACACC
GCCCCGTTCTCTTTATTCTCGTGGCCGCAGGCTTCCTTGCCCAAATGAGG
GAAAAAGGGAAGGAGAAACAAAACTAGCCAAGCAATTAGAAATACGTGCT
GCTTGTTGGGTCGCCGCCAGATACAACGCCAGTTTGTTGACGAGCTCGTA
GAACAGTACCTTTGGAATCCCTATCCTTTATAATCCCAACCCTGTCGGTT
TGGCAAGGGTAGACCGGGTCGGTTGCGTCGCCCGAAGCCGCATTATTTGA
AGACAATCTCACCCTGTTATGCCCATCAGGTTGGGAGGTCAGTTGGGTCG
CCCGAAGCCGCATTATTTGAAGACAAACCTCAACCTGGTATGCCTATGAA
GTTGGGAGCGATTCAAGTTTGGATCGTCCACTCCAAACTAAATGTTCACG
GTTTATTGTTCAAGTCTTACACGTCTGTCTCTCTCTGCTACAGGAGGGGC
ACCACCAAGAAGAGGAAGAAGTCCACAGCGGCGGACATCCGCGTAGGAAA
GGAAACAAAGAGGCAGAAGACGACCGCCCAGCCACGCGAAGAGCGAGGAG
AGACAACCAAGAGATCCGCCTCCCCTACTCCCACCACCAAGGATCAGACG
AAGAACGCGAAAGGGAAAGAAAAGGCTTCGGGCGGCCTAGAGGAGAGAGA
GGAAGGAGAGGAGGATAAAAGCGATCAGTCGAACGATGACTCGTACGACG
ATGCCCTCGGACAAGGAGGAGGAGAAGTAGAAGGGAATGATCAGCGGGAG
GAACAAGACGATGCGGATACTGACTTCTTGCTGCTCGACGGCGAACCTGG
AAACGGTCGCGTATATGACGCTGATGGCGACAAAGTGCGCGAAGAAATGG
AGGCCGAAGAAGGCCATACGAACTTTCGTTCAGATACCTTCCCTCCCTCT
GGCCCTTCCTCCGGCGAGGTACCGCCCATACCCAACCCCTCTGCCCCGCC
CACTGGCACGCCCTCTGCCGAGCCACTCGCCGAAGAAGACCAAACAAACC
TTCATCCAGATACCTTTCCTCCCCCAGTCAAGACATCGCCCGCGCCCACC
CCCTCTGCCCCGCCCACTGGCACGCCCTCTGTCAAGCCACCCGCCAAGCC
CTCTGCCGAGCCCTCTGCCGTGACCTGTGCAAGCCGACGAGACGACAACG
ATCATGTGTGAGTGCTCTTTTTAACCCTGTTGAGATTGACAAACTACTTG
GCTACCGTACTTGTTCTATCGGGTGTGCGTCTACAAGGGCTGCTGCTCTG
TAACTTTGCTATTCGGTATTTACAGGTATTATAGTCTAGACGAATTATCT
GCATAGAGCAGGAGGTAGAGCTTGAGGTTCTTGCAGGGAGGGCGCCCAAT
ATGTATACTACTATCAGCTGCAAGCAACTAGCAACGACCCTTATCGTTTT
TGCGGGCGGTCATGTCTGTGGTTTGGGTTGTGCGCTGATGCTCAGGACAC
GAGTGAACGAGGCGGTGAAGAAAGCCAAGATTTACCCCACCCAAAACGAT
GGCGGTTTCAGCGAATTCTTCAAGGTGAGGAGTAAAGACGTGTTTTGCAG
CGTCTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig78:10051..17757- >mRNA_Ecto-sp13_S_contig78.19048.1 ID=mRNA_Ecto-sp13_S_contig78.19048.1|Name=mRNA_Ecto-sp13_S_contig78.19048.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig78:10051..17757- (Ectocarpus species13 EcNAP12_S_4_19m)
AAGCGAGAGAACAAAACGATTTTTCTTTTTTTGTTTCTTTCAGTTGCGGA
TGGCTCCTACAGCAGTACAGTGTCGTGCAACCCTTCATTGAAGGGTCGGC
GCGTGGTGGAAGTCATGGCTTCGGAAATGAAGGAGCCAACCTTGGTGGGG
GAAATTGTCACGTTCAGCCCAACCAACTTCGTCTACCTTTGCAACAACAA
GTCGTTGGGAGTTGGACAGCCCAACCACATGAAGAATCCAAACGCCTTCG
ACCACACCATCGCCTGCTCGTTTGCGGACTCCGTTGTTGCCTGCGGTGCC
ATGTCGGAAACAACGTTAATGATCCTATCTCCAGCGTCGACGGAGTGGGC
AACAACGGAGACGTGGCTCAGCGGGACGATGGCGGCGCTCGGGCACTTGC
CGGGAACAAGCAGAGAGCGGACCGAGATGGAAGGCAGGATCAGAGCTCTA
CAGGCCAAGGGCGCTAAGCCTACGTGGGAGGAGACGATAGAGGCAACATT
GTGGGACTACAACACGTTTGGACCACCAACCAGCACTGAGTTCAACGATA
CGCGGCCGGAGTTTGTGGCGGTGCAGGGACAGCACCGCGCAGCGATACTC
AATGCAGTGTTTGCCACCGAGCTAGGATTATCGCAAAGTCGCGGAGGAGA
CCTCCGGGGCGGGCTTTTTACAGACGACGACAGATCAGCTAAGATGCCTA
TCCTGAAGGAAAAGCTGGAGAACGTGAAAATGTTCGTGAAAGTCTACGAT
TTTCTCACCCATGACGACGCTGAGGAGGTGGGGAGACGCCAGCGCACGGT
CGAGAAGACCACCACGGATGTCTCTTTCTTGGACGTCTCCACAAGCCTGG
GGGTGCTCGTCAAACAGATATTTAACCCACGTGCTGAAATCTGTGGTGGT
CGTGCGAAGGAGATTTTTGGCGACGAGTGGCAGAAGATAATGACGAGCAA
AAGCCGAAAGAAGCAACAGGCGGTCATCAGGAAGAGCCTCATGAAGCGTG
TCAACAACACGATTCAAAAACAGCTAGGGTTAAATCCCCAAGGCAAAAAC
TATTTCGCCGTCTGCGTGTATGCCTTCGCGTTGCACCCGGAGAGGCCCTC
GCTCCAGCTCCTTCGACAATACTTCCACGACCAAAACGCACAGGTGGTCA
AGGCGAAGGCAGCCAAGATCAAGAGCATAGGGCGAGCAGGGAAACACTCT
GCCGGAGAGGGATCCGGGGACGCAGACAAAGCTTCTGCCACGGGCCATGC
ACCGCACCGCATCACCGTTACTTCGATGGGAGCCTTCTTTTCGCTTACAC
CCTACAGTCAGAACACTCAGCTCGTCAAGGACCTAGTGCGGGAGCGGGGT
CTATGCGACGAATTTCGGACAGTGTGCTTTCACCATTTCGTCGTCCTCGA
AGTCGTGCGGGCTATGGTCACTGGGTTGACGACGCGGAGAAACTGCTCCG
ACGACCCTCACCCTTGCACGGACAAGGACACCGTTATTCCGATACCCCCC
GAGACGAGCGATCTCTACCTCATACTGAAGACCTTTGTCAGTGTGGAGGA
GGGTGCTGTTGTTGCCAGCGAAGGCCAAGACTTCATCAGCGGCATGCACC
ATGAGGTAGACCTCTGGATTCCGCATCTAGTGAGTTTTGCACTCGAGCTC
CAGAACCAAGGACCGTTGCTGACCGGGAGTTTCAAACTCACAAAAAAGCC
TCTGACGAAGTCGTTGAACAGGAGGGTGAACGTCTTCAAATCGGGCAATC
AGCAGGGCCTCAATCCCTCCAACTCTTCAAACCTTACACCTGGGTGGGGT
GTACAACTGCACATGTCGACATCCGGAACGGAGCCCGACTACACCAAGCG
GACGTGGGACGACTGGTTCACGGACGACATACGGGGAGACGATGGCGAAC
TCACTACCAACTACATGCACCGCATGGTTGCAACAGTGTTTGGTCTGCTT
ATTGTCGACCGGAGCCTCGTGGGGCTGTCCTCCAGGCACAAGCTTACGGA
CAGGCTAGGCAAGTTTCGTGAACTGTTGGGGGCTATCCCAGCTGTCGGCG
CGGGAGCGAGACTGAAGGCGCTTCTGAAGAACCAAGAGGCGGTGAAGGGC
AAACTCCAAGCGAAGGACCAGTCCTTCTTTGGCAAAGATCGCCTTGCCCT
CTTGTTTGGTGGCGATCAAGCGCATGGGGGGGGGAGGGTGAAGTCATGTT
CCGAACTGGGTCCCTCGGACGAGGGGACGTCGTCCGACAGCAGCAGCGAT
GTGGGTGAGCCTGACCGCAAGCGCGACGGAGTGGGTGAGCCTGCTCGCAA
GCGCGGCTCGAAAGGACACCAGGAAAAATTCGCCGTTTCTATCATCAGGG
ATGCCGGCGACCGCGATGCTGACGAAGTCTCGGTTCGCTGGCCCAACAGT
GTGGTCAAACAACTTGGCCTGTTGGACGATGACGGAGAGCTCAAGTGTTC
CAATGGCGTCTTCCGTTTCCACATTACGAAAGAGGCAACGAGGGGCACCA
CCAAGAAGAGGAAGAAGTCCACAGCGGCGGACATCCGCGTAGGAAAGGAA
ACAAAGAGGCAGAAGACGACCGCCCAGCCACGCGAAGAGCGAGGAGAGAC
AACCAAGAGATCCGCCTCCCCTACTCCCACCACCAAGGATCAGACGAAGA
ACGCGAAAGGGAAAGAAAAGGCTTCGGGCGGCCTAGAGGAGAGAGAGGAA
GGAGAGGAGGATAAAAGCGATCAGTCGAACGATGACTCGTACGACGATGC
CCTCGGACAAGGAGGAGGAGAAGTAGAAGGGAATGATCAGCGGGAGGAAC
AAGACGATGCGGATACTGACTTCTTGCTGCTCGACGGCGAACCTGGAAAC
GGTCGCGTATATGACGCTGATGGCGACAAAGTGCGCGAAGAAATGGAGGC
CGAAGAAGGCCATACGAACTTTCGTTCAGATACCTTCCCTCCCTCTGGCC
CTTCCTCCGGCGAGGTACCGCCCATACCCAACCCCTCTGCCCCGCCCACT
GGCACGCCCTCTGCCGAGCCACTCGCCGAAGAAGACCAAACAAACCTTCA
TCCAGATACCTTTCCTCCCCCAGTCAAGACATCGCCCGCGCCCACCCCCT
CTGCCCCGCCCACTGGCACGCCCTCTGTCAAGCCACCCGCCAAGCCCTCT
GCCGAGCCCTCTGCCGTGACCTGTGCAAGCCGACGAGACGACAACGATCA
TGTGACACGAGTGAACGAGGCGGTGAAGAAAGCCAAGATTTACCCCACCC
AAAACGATGGCGGTTTCAGCGAATTCTTCAAGGTGAGGAGTAAAGACGTG
TTTTGCAGCGTCTGA back to top
|