mRNA_Ecto-sp13_S_contig7797.19047.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig7797.19047.1
Unique Name	mRNA_Ecto-sp13_S_contig7797.19047.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)

HSP 1 Score: 719 bits (1855), Expect = 5.490e-256
Identity = 364/372 (97.85%), Postives = 366/372 (98.39%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTSTGNIPARIKKVLMETCRPA 1108
            IGSAEVCFLIVGHTHIKIDQVFS   VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKA NPVRPTSLTPPSVGDIAFFKAEEAPFVLGEV+SIAADASPVNVNIHWYGPINNTVRAGAGS  VEDYAVARFSKDFILTSGAKRRTPDASDEPITRI+ACCSSLTSTGNIPARIKKVLMETCRPA
Sbjct:  182 IGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKALNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVLSIAADASPVNVNIHWYGPINNTVRAGAGSATVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIIACCSSLTSTGNIPARIKKVLMETCRPA 553

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KES7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES7_9PHAE)

HSP 1 Score: 671 bits (1730), Expect = 3.660e-240
Identity = 338/350 (96.57%), Postives = 343/350 (98.00%), Query Frame = 2

Query:   65 FSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTSTGNIPARIKKVLMETCRPAPS 1114
            FSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVS+WAKRFMHSDAWLGLTATGGAQVDANPHR FRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAP+GVVDALLAE+SDSLKLL SGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKA NPVRPTSLTPPSVGDIAFFKAEEAPFVLGEV+SIAADASPVNVNIHWYGPINNTVR GAGS  VEDYAVARFSKDFILTSGAKRRT DASDEPITRI+ACCSSLTSTGNIPARIKKVLMETCRPAPS
Sbjct:    6 FSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSLWAKRFMHSDAWLGLTATGGAQVDANPHRPFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPEGVVDALLAEKSDSLKLLCSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKALNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVLSIAADASPVNVNIHWYGPINNTVRVGAGSATVEDYAVARFSKDFILTSGAKRRTHDASDEPITRIIACCSSLTSTGNIPARIKKVLMETCRPAPS 355

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KLW4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW4_9PHAE)

HSP 1 Score: 630 bits (1624), Expect = 1.110e-223
Identity = 320/336 (95.24%), Postives = 325/336 (96.73%), Query Frame = 2

Query:   68 SVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTSTGNIPARI 1075
            SVGTLGRSIFTRSQ GELFRES KELPVHVGTLTNLGNFKG+YLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFD VPPFELKTVDPTVIA IEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVS PSKRKA NPVRPTSLTPPSVGDIA FKAEEAPFVLGEV+SIAADASPVNV+IHWYGPINNTVRAGAGS  +EDYAVARFSKDFILTSGAKRRT DASDEPI RI+ACCSSLTSTGNIPARI
Sbjct:   61 SVGTLGRSIFTRSQPGELFRESDKELPVHVGTLTNLGNFKGVYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDIVPPFELKTVDPTVIAPIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSGPSKRKALNPVRPTSLTPPSVGDIACFKAEEAPFVLGEVLSIAADASPVNVDIHWYGPINNTVRAGAGSATIEDYAVARFSKDFILTSGAKRRTHDASDEPIPRIIACCSSLTSTGNIPARI 396

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)

HSP 1 Score: 621 bits (1602), Expect = 3.050e-219
Identity = 322/360 (89.44%), Postives = 323/360 (89.72%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKL--------------------------NLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTP 994
            IGSAEVCFLIVGHTHIKIDQVFS   VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKL                          NLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRK  NPVRPTSLTPPSVGDIAFFKAEEAPFVLGEV+SIAADASPVNVNIHWYGPINNTVRAGAGS  VEDYAVARFSKDFILTSGA    P
Sbjct:   70 IGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLXLPLKPTXXXXXXXXXXXXXXXXXXXNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKVLNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVLSIAADASPVNVNIHWYGPINNTVRAGAGSATVEDYAVARFSKDFILTSGASAERP 429

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 6.500e-202
Identity = 306/379 (80.74%), Postives = 315/379 (83.11%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPF-----ELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTSTGNIPARIKKVLMETCRPAPS 1114
            IG AEVCFLI+GHTHIKIDQVFS   VGTLGRSIFT+ QLGELFRESYKELPVHVG LTNLGN KGLYL DNKLNLRKIRNI TFRAFRVGKVAGEVSVW KRFMHSDAWLGLTATGGA+VDA P+RLFRFAAP+FDNV PF     +LKT DPTVIALIEKRYIATRPRLEAAYAL                             DLPME LHT+IPPA  PPS GATADGV N PSR NGVSEPSKRKA NPVRPTSL PPSVGDIAFF AEEAPFVLGEV+SIAADASPVNVNIHWYGPI NTVRAGAGS  VEDYAVARFSKDFI TSGAKRRTPDASDE I RI+ CCSSLTSTGNIPARIKKVLMETCRPAPS
Sbjct:   70 IGFAEVCFLILGHTHIKIDQVFSRLFVGTLGRSIFTKIQLGELFRESYKELPVHVGILTNLGNLKGLYLADNKLNLRKIRNIATFRAFRVGKVAGEVSVWVKRFMHSDAWLGLTATGGARVDAIPYRLFRFAAPSFDNVLPFNLLPCKLKTADPTVIALIEKRYIATRPRLEAAYAL-----------------------------DLPMERLHTSIPPATWPPSTGATADGVGNPPSRVNGVSEPSKRKAPNPVRPTSLAPPSVGDIAFFNAEEAPFVLGEVLSIAADASPVNVNIHWYGPIKNTVRAGAGSATVEDYAVARFSKDFIQTSGAKRRTPDASDEAIKRIIVCCSSLTSTGNIPARIKKVLMETCRPAPS 419

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 1.720e-200
Identity = 291/302 (96.36%), Postives = 295/302 (97.68%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTV 898
            IGSAEVCFLIVGHTHIKIDQVFS   VGTLGRSIFTRSQLGE FRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLR+IRN+T F AFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKA NPVRPTSLTPPSVGDIAFFKAEEAPFVLGEV+SIAADASPVNVN+HWYGPINNTV
Sbjct:  237 IGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGERFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRRIRNVTKFWAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKALNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVLSIAADASPVNVNMHWYGPINNTV 538

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5JTH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH9_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 4.050e-166
Identity = 253/265 (95.47%), Postives = 254/265 (95.85%), Query Frame = 2

Query:    8 SAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFK 793
            SAEVCFLIVGHT IKID VFS   VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVD NPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNT SRAN VSEPSKRKA  PVRPTSLTPPSVGDIAF +
Sbjct:  346 SAEVCFLIVGHTLIKIDHVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDDNPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTHSRANRVSEPSKRKALTPVRPTSLTPPSVGDIAFLQ 610

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KK38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK38_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 1.660e-154
Identity = 255/374 (68.18%), Postives = 264/374 (70.59%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAGAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTSTGNIPARIKKVLMETCRPAPS 1114
            IGSAEVCFLIVGHTH K DQVFS   VGTLGRSIFTR QLGELFRESY+ELPV +GT TNLGNFKGLYL D KLNLRKIRN+TTFRAFRVGK+AGEVSVW  RFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTF+NVPPF+LKTVDPTVIALIEKRYIATRPRLEAAYAL                                                                                       VGDIAFF AEEAPFVLGEV+SI ADASPVNVNIHWYGPINNTVRAGAGS  VEDYAVARFSKDFILTSGAK RT DASD+PIT I+ACCSSL STGNIPAR  KVLMETCR APS
Sbjct:  297 IGSAEVCFLIVGHTHTKTDQVFSRLSVGTLGRSIFTRIQLGELFRESYRELPVRIGTPTNLGNFKGLYLADIKLNLRKIRNMTTFRAFRVGKIAGEVSVWVDRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFNNVPPFKLKTVDPTVIALIEKRYIATRPRLEAAYALDK------------------------------------------------------------------------------------GVGDIAFFNAEEAPFVLGEVLSIDADASPVNVNIHWYGPINNTVRAGAGSATVEDYAVARFSKDFILTSGAKLRTQDASDKPITCIIACCSSLASTGNIPARNIKVLMETCRSAPS 586

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BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 2.210e-107
Identity = 167/172 (97.09%), Postives = 167/172 (97.09%), Query Frame = 2

Query:    2 IGSAEVCFLIVGHTHIKIDQVFS---VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYAL 508
            IGSAEVCFLIVGHTHIKIDQVFS   VGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWL LTATGGAQV ANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYAL
Sbjct:   70 IGSAEVCFLIVGHTHIKIDQVFSRFSVGTLGRSIFTRSQLGELFRESYKELPVHVGTLTNLGNFKGLYLDDNKLNLRKIRNITTFRAFRVGKVAGEVSVWAKRFMHSDAWLDLTATGGAQVAANPHRLFRFAAPTFDNVPPFELKTVDPTVIALIEKRYIATRPRLEAAYAL 241

[Close]

BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Match: A0A6H5JW97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW97_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 1.090e-79
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 2

Query:  500 YALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPMEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRAG 907
            ++ APDGVVDALLAEQSDSLKLLRSGGTINNFDLP EWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKA NPVRPTSLTPPSVGDIAFFKAEEAPFVLGEV+SIAADASPVNVNIHWYGPINNT  +G
Sbjct:    5 FSAAPDGVVDALLAEQSDSLKLLRSGGTINNFDLPTEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKALNPVRPTSLTPPSVGDIAFFKAEEAPFVLGEVLSIAADASPVNVNIHWYGPINNTGGSG 140

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7797.19047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
A0A6H5KA02_9PHAE	5.490e-256	97.85	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KES7_9PHAE	3.660e-240	96.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLW4_9PHAE	1.110e-223	95.24	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KAY2_9PHAE	3.050e-219	89.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JAR9_9PHAE	6.500e-202	80.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXN7_9PHAE	1.720e-200	96.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTH9_9PHAE	4.050e-166	95.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KK38_9PHAE	1.660e-154	68.18	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KN27_9PHAE	2.210e-107	97.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW97_9PHAE	1.090e-79	93.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7797	contig	Ecto-sp13_S_contig7797:4251..6697 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	1497
Hectar predicted targeting category	other localisation
Exons	3
Cds size	870

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464049.9961305-UTR-Ecto-sp13_S_contig7797:4250..4573	1681464049.9961305-UTR-Ecto-sp13_S_contig7797:4250..4573	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig7797 4251..4573 -
1681464050.0300264-UTR-Ecto-sp13_S_contig7797:5772..6013	1681464050.0300264-UTR-Ecto-sp13_S_contig7797:5772..6013	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig7797 5773..6013 -
1681464050.0414824-UTR-Ecto-sp13_S_contig7797:6634..6697	1681464050.0414824-UTR-Ecto-sp13_S_contig7797:6634..6697	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig7797 6635..6697 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464050.00775-CDS-Ecto-sp13_S_contig7797:4573..5238	1681464050.00775-CDS-Ecto-sp13_S_contig7797:4573..5238	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7797 4574..5238 -
1681464050.0187707-CDS-Ecto-sp13_S_contig7797:5567..5772	1681464050.0187707-CDS-Ecto-sp13_S_contig7797:5567..5772	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7797 5568..5772 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7797.19047.1	prot_Ecto-sp13_S_contig7797.19047.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig7797 4574..5772 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig7797:4251..6697-
coding sequence from alignment at Ecto-sp13_S_contig7797:4251..6697-

protein sequence of mRNA_Ecto-sp13_S_contig7797.19047.1

>prot_Ecto-sp13_S_contig7797.19047.1 ID=prot_Ecto-sp13_S_contig7797.19047.1|Name=mRNA_Ecto-sp13_S_contig7797.19047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=290bp
MHSDAWLGLTATGGAQVDANPHRLFRFAAPTFDNVPPFELKTVDPTVIAL
IEKRYIATRPRLEAAYALAPDGVVDALLAEQSDSLKLLRSGGTINNFDLP
MEWLHTAIPPAPLPPSAGATADGVDNTPSRANGVSEPSKRKASNPVRPTS
LTPPSVGDIAFFKAEEAPFVLGEVMSIAADASPVNVNIHWYGPINNTVRA
GAGSVAVEDYAVARFSKDFILTSGAKRRTPDASDEPITRIVACCSSLTST
GNIPARIKKVLMETCRPAPSSSSESEASDSDDDGSGSGL*

mRNA from alignment at Ecto-sp13_S_contig7797:4251..6697-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig7797.19047.1 ID=mRNA_Ecto-sp13_S_contig7797.19047.1|Name=mRNA_Ecto-sp13_S_contig7797.19047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7797:4251..6697- (Ectocarpus species13 EcNAP12_S_4_19m)
GATCGGTTCTGCAGAGGTCTGCTTCCTGATCGTTGGACACACGCACATCA
AAATCGACCAAGTGTTTTCTCGGTGAGTACCCTTGTAATATCGGAGCCCC
TTGTTTGGCCACCCTGCGGCCCCCCCCCCGGTGGAGGATCTCTTTCTGGG
CGTACCCCCCGGTTTTTCAGCATTCAATATCGTCCCCCCATGAAACCCAA
GATTTACATTACAGAACGCGCCCGCAAGTAAGATATGGGGCGAGCCTCAG
TTTCCTATTGTCGGCCGAAGCCCAAGCCTCGTTGCTGAGCTTGTTTTGGG
CAGTTCTTATTTCTTGGGGCCTTGCGGGATATTGAGGGTTACCTTCTAAA
CAACCCCCAAAAAGGTAGCCCACGTCCACGTTGCAGCCGCCATTCGCCCT
CGAGTCTAATGAAGCCACCTGCGGTGGGTTCTTGCGTATCGCTGTATTTG
TCTGACATCCAAGACAGCCACCCATGCCCGATACAACAAAAACTCTTACC
CACATGTAGGGGTAGGGGTGGGTACTGGAGTTCGACGGCCGTTTAATATT
TTCACACTCGCTCTACCTAACTTCGTTTCCCATGGTGGTGGAGCGGTCCT
GCTCGCAATATCTTTTTGGGGTGTTTCTTACTTCGTGGTCCTGGTTGAGC
TCCTCGCCCTCACGACTCCCACTCAAACCTACAGGTTCTCCGTGGGTACC
CTCGGTCGAAGCATCTTCACGAGGAGTCAACTTGGTGAGCTATTCCGGGA
GTCGTACAAGGAACTTCCGGTACACGTAGGGACTCTGACCAACCTCGGCA
ACTTCAAGGGGCTCTACCTCGACGACAACAAGCTCAACCTTCGGAAGATC
CGAAACATCACCACGTTTCGGGCCTTCCGGGTGGGGAAGGTAGCAGGGGA
GGTTTCCGTGTGGGCCAAGCGCTTCATGCACAGCGATGCCTGGCTTGGTC
TGACAGCGACCGGCGGGGCCCAGGTCGACGCCAACCCACACCGTCTCTTC
CGGTTCGCTGCGCCGACTTTCGACAACGTGCCTCCTTTTGAGCTCAAGAC
GGTCGACCCCACCGTGATCGCCCTCATCGAGAAGCGCTACATCGCGACGC
GGCCCCGCCTAGAGGCTGCTTACGCACTAGGTAAGGGGCGTGCACATGTG
TAGTATGGTCGTGCTTCGCTCGGTCTCACAGAGCATGAGAGTGGTTACAC
CTTTCGAATGTAACATTGTCGTTACCTTCCTGACTAAACCATTCTGACAA
GGAAGAAAACACGTTCGGAGCTACGGTCGCTCGGAGGACAACAACGAGTC
ATTTTCACGGGACGTTTGGTCTAAGTATCTTACGATTTTACTTGTTCTCG
TCTCGGAGACCTTATGACCCACAACATCTACGTACTTGTAAACGTTGATA
CTGCCATCTCATCGCGCCCTCGTTTACGTGTCCCTCCATGAACCTCACTT
TCTCTGCAGCTCCTGACGGTGTGGTCGACGCTCTATTGGCTGAGCAGAGC
GACTCGCTGAAGTTGTTGCGCTCCGGAGGAACGATCAACAACTTCGACCT
CCCAATGGAATGGCTCCACACGGCAATCCCGCCAGCGCCTTTGCCTCCCT
CTGCGGGCGCGACCGCGGACGGAGTGGACAACACACCCTCTCGGGCGAAC
GGGGTGTCAGAGCCCTCTAAGAGAAAGGCCTCAAACCCAGTGCGTCCAAC
GTCGCTAACACCACCCAGCGTTGGCGACATCGCATTCTTCAAGGCGGAGG
AAGCTCCGTTTGTGCTGGGGGAGGTGATGAGCATAGCTGCAGACGCCTCG
CCGGTGAACGTCAACATCCACTGGTATGGGCCTATCAACAACACCGTTAG
GGCGGGGGCGGGCAGCGTGGCTGTCGAGGACTATGCCGTGGCGCGTTTCA
GCAAGGATTTCATCCTAACGAGCGGCGCGAAGCGCAGAACGCCCGATGCC
AGCGACGAGCCTATCACACGCATTGTCGCATGCTGCAGTTCGCTAACTTC
AACGGGTAACATCCCGGCGAGAATTAAGAAAGTGCTGATGGAGACTTGCC
GGCCTGCACCTTCGTCGTCCTCGGAGAGCGAAGCAAGTGACTCGGACGAC
GACGGGTCTGGAAGCGGACTCTGAGGAAGACGAGTCCGATGACGACAGCT
ATGGTTCAGAGTAGTCCTGGCGCCTATCAGGGACTAGATTGATGTCGAGA
TCGGGGCGCGTTCTGGGGATCAAGAAGATTTGTACTAGCGGTTTTGCGCC
GTACGATGGTCGACATTTGTCAACTTCGAGCTCTGTACCCAAATCTTGTC
GTAGGGGCTGTGGGTCTTTCCATCATAGTAACATAACCTTCGAAGTGTCG
TGTGCTCAGATTTTTATTCTTTGAGTGCGTCTGGGGTTCTATCGAAAGTG
ACCGGAAAACACGTGTAAGAACTCGTAAGAAATCTGTGTCTGCCCGG

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7797:4251..6697-

>mRNA_Ecto-sp13_S_contig7797.19047.1 ID=mRNA_Ecto-sp13_S_contig7797.19047.1|Name=mRNA_Ecto-sp13_S_contig7797.19047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=870bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7797:4251..6697- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACAGCGATGCCTGGCTTGGTCTGACAGCGACCGGCGGGGCCCAGGT
CGACGCCAACCCACACCGTCTCTTCCGGTTCGCTGCGCCGACTTTCGACA
ACGTGCCTCCTTTTGAGCTCAAGACGGTCGACCCCACCGTGATCGCCCTC
ATCGAGAAGCGCTACATCGCGACGCGGCCCCGCCTAGAGGCTGCTTACGC
ACTAGCTCCTGACGGTGTGGTCGACGCTCTATTGGCTGAGCAGAGCGACT
CGCTGAAGTTGTTGCGCTCCGGAGGAACGATCAACAACTTCGACCTCCCA
ATGGAATGGCTCCACACGGCAATCCCGCCAGCGCCTTTGCCTCCCTCTGC
GGGCGCGACCGCGGACGGAGTGGACAACACACCCTCTCGGGCGAACGGGG
TGTCAGAGCCCTCTAAGAGAAAGGCCTCAAACCCAGTGCGTCCAACGTCG
CTAACACCACCCAGCGTTGGCGACATCGCATTCTTCAAGGCGGAGGAAGC
TCCGTTTGTGCTGGGGGAGGTGATGAGCATAGCTGCAGACGCCTCGCCGG
TGAACGTCAACATCCACTGGTATGGGCCTATCAACAACACCGTTAGGGCG
GGGGCGGGCAGCGTGGCTGTCGAGGACTATGCCGTGGCGCGTTTCAGCAA
GGATTTCATCCTAACGAGCGGCGCGAAGCGCAGAACGCCCGATGCCAGCG
ACGAGCCTATCACACGCATTGTCGCATGCTGCAGTTCGCTAACTTCAACG
GGTAACATCCCGGCGAGAATTAAGAAAGTGCTGATGGAGACTTGCCGGCC
TGCACCTTCGTCGTCCTCGGAGAGCGAAGCAAGTGACTCGGACGACGACG
GGTCTGGAAGCGGACTCTGA