prot_Ecto-sp13_S_contig7795.19043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7795.19043.1
Unique Nameprot_Ecto-sp13_S_contig7795.19043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length93
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7795.19043.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.760e-17
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0 
Query:   53 MKEFVAPASHELLPKPARASSPIWNYGVKVKDRSRGKWAFA 93
            MKEF APASHEL+PKPARASSPIWNYGVK+KDRSRGKWAFA
Sbjct:    1 MKEFEAPASHELVPKPARASSPIWNYGVKLKDRSRGKWAFA 41
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7795.19043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFP4_ECTSI2.760e-1792.68Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7795contigEcto-sp13_S_contig7795:186..804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7795.19043.1mRNA_Ecto-sp13_S_contig7795.19043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7795 186..806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7795.19043.1 ID=prot_Ecto-sp13_S_contig7795.19043.1|Name=mRNA_Ecto-sp13_S_contig7795.19043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=93bp
SPLAGCTLAAAVITPADGQQTGGAVVPSAGAPVTVPRGETTANEEAEATS
AAMKEFVAPASHELLPKPARASSPIWNYGVKVKDRSRGKWAFA
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