prot_Ecto-sp13_S_contig7793.19041.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7793.19041.1
Unique Nameprot_Ecto-sp13_S_contig7793.19041.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length390
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7793.19041.1 vs. uniprot
Match: D7FNX5_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX5_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 3.370e-103
Identity = 173/229 (75.55%), Postives = 180/229 (78.60%), Query Frame = 0 
Query:  162 MAVARALGRVLRGNRRSGLNSGATPQHKKITSRAADGGGGKVLRRWRARQRQGRARRHPDPADGHLAAATNEVEKQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASTXXAVAAVAGDGDGGSGVRSANSSVVMNEGICVGVDGSGAALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRAGLTDMDLLRFVMFRHGDVDAAWWQVR 390
            MA+ARALGRVLRGNRRS LNSGATPQHKK TSRAADGG G +LRRWRARQ QGR RRHPDPADGHLAAAT+EV K+                              AAST X     A  GDGGSGVRSANSS V+NEGICVGVDGSG ALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGR GLTDMDLLRFVMFRHGDVDAAW Q++
Sbjct:    1 MAMARALGRVLRGNRRSRLNSGATPQHKKNTSRAADGGVGGLLRRWRARQGQGRGRRHPDPADGHLAAATDEVGKKTKAEAGGGAGKHRASIRESGGEVQANGDPAAASTAXXXXXXAVTGDGGSGVRSANSSFVVNEGICVGVDGSGPALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKGLHTWLATGGGEGRTGLTDMDLLRFVMFRHGDVDAAWRQLK 229
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7793.19041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNX5_ECTSI3.370e-10375.55CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 22..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..390
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7793contigEcto-sp13_S_contig7793:3994..7127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7793.19041.1mRNA_Ecto-sp13_S_contig7793.19041.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7793 3994..7127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7793.19041.1 ID=prot_Ecto-sp13_S_contig7793.19041.1|Name=mRNA_Ecto-sp13_S_contig7793.19041.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=390bp
MHAPSNSLLMLDPPHTRYGRRLALFTGALLLPVQQQPLLDGSIGSYLQNG
GAHESTSGGSVVGPAAAAAAAAAGGGGIPMAMRYSYCRRSIDALFAAGAT
AEEKDDEGAERSQQPSSNRDLQHDPLHHRHGKLDDDGPKPAQGFGRVAEL
TSQKRWQHLRPMAVARALGRVLRGNRRSGLNSGATPQHKKITSRAADGGG
GKVLRRWRARQRQGRARRHPDPADGHLAAATNEVEKQKAAEAGGGAGKHR
TSIRESGGEIQANSDPAAASTAAAVAAVAGDGDGGSGVRSANSSVVMNEG
ICVGVDGSGAALRPGKYDGEDVSPEAWTKVGELRARAERSDPNAGEEEKG
LHTWLATGGGEGRAGLTDMDLLRFVMFRHGDVDAAWWQVR
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