mRNA_Ecto-sp13_S_contig1227.1904.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: D7FU30_ECTSI (zf-met2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU30_ECTSI) HSP 1 Score: 149 bits (376), Expect = 3.290e-39 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFPGRLS 672
MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAML DHVTAKHNKKKTPAECFPGRLS
Sbjct: 1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLADHVTAKHNKKKTPAECFPGRLS 79
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: E1ZJ16_CHLVA (zf-met2 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ16_CHLVA) HSP 1 Score: 72.0 bits (175), Expect = 6.070e-12 Identity = 46/77 (59.74%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAK-AGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFPG 663
MGGGNAQKSATAR R K K AG SQLA N A SIVCQ+CRQSFM A L +H ++H K+K ECFPG
Sbjct: 1 MGGGNAQKSATARQRKAEKDKKLAGGKSQLADNAKALSIVCQICRQSFMCNMTPAKLKEHSDSRHPKQKFE-ECFPG 76
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 n=4 Tax=Camelineae TaxID=980083 RepID=Y2309_ARATH) HSP 1 Score: 71.6 bits (174), Expect = 8.070e-12 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFP 660
MGGGNAQKSA ARA+N K AGKGSQL NK A SI C+VC Q+F+ +++ +H AKH K A CFP
Sbjct: 1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVA-CFP 74
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: A4RZ85_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ85_OSTLU) HSP 1 Score: 71.6 bits (174), Expect = 8.070e-12 Identity = 44/76 (57.89%), Postives = 47/76 (61.84%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFPG 663
MGGGNAQKSATAR + K KAG GSQLA N A S VCQVCR SFM L +H KH K+T CFPG
Sbjct: 1 MGGGNAQKSATARKKAMEKAQKAGAGSQLAANAKAMSTVCQVCRASFMCTLAPIKLKEHSDNKH-PKQTFEHCFPG 75
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: A0A059LL58_9CHLO (zf-met2 domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LL58_9CHLO) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-11 Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFPG 663
MGGGNAQK+A ARA+ K AK GSQL N AA +IVCQ+CR +F+ S L +H KH K K ECFPG
Sbjct: 1 MGGGNAQKTAMARAKKLEKAAKGSAGSQLKSNAAANNIVCQICRSTFICTSTVVKLKEHADNKHPKNKFE-ECFPG 75
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: A0A0L0DBT5_THETB (zf-met2 domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DBT5_THETB) HSP 1 Score: 71.2 bits (173), Expect = 3.040e-11 Identity = 43/71 (60.56%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 451 AQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNK-KKTPAECFP 660
AQKS AR RN A+KA AGKGSQL K AQSI C+VC Q+FM S+ A L H+ AKH+K KT A CFP
Sbjct: 15 AQKSKIARERNAARKAAAGKGSQLKAIKKAQSIQCKVCFQTFMCTSSQASLQAHIDAKHSKLNKTFAGCFP 85
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: UPI0003E681E8 (uncharacterized protein At2g23090 n=2 Tax=Chenopodiaceae TaxID=1804623 RepID=UPI0003E681E8) HSP 1 Score: 68.9 bits (167), Expect = 6.980e-11 Identity = 42/75 (56.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFP 660
MGGGNAQKS TAR RN +K KA KGSQL NK A SI C+VC Q+FM + + +H AKH K A CFP
Sbjct: 1 MGGGNAQKSKTARERN-LEKNKASKGSQLDTNKKAMSIQCKVCMQTFMCTTTEVKCREHAEAKHPKHDITA-CFP 73
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: UPI001FB16D2F (uncharacterized protein At2g23090-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB16D2F) HSP 1 Score: 68.6 bits (166), Expect = 9.270e-11 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFP 660
MGGGN QKS TAR RN +K KA KGSQL NK A SI C++C Q+FM + +A +H AKH K + A CFP
Sbjct: 1 MGGGNGQKSKTARDRN-LEKLKAPKGSQLDANKKAMSIQCKICMQTFMCTTTEAKCKEHAEAKHPKAELTA-CFP 73
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: A0A6P4PHM6_GOSAR (uncharacterized protein At2g23090-like n=12 Tax=Malvaceae TaxID=3629 RepID=A0A6P4PHM6_GOSAR) HSP 1 Score: 68.6 bits (166), Expect = 9.800e-11 Identity = 44/76 (57.89%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAG-KGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFP 660
MGGGNAQKS TAR RN +KAKAG KGSQL NK A SI C+VC Q FM +++ +H AKH K A CFP
Sbjct: 1 MGGGNAQKSKTARERN-LEKAKAGAKGSQLESNKKAMSIQCKVCMQEFMCTTSEVKCREHAEAKHPKSDVYA-CFP 74
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Match: D7TT97_VITVI (Uncharacterized protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=D7TT97_VITVI) HSP 1 Score: 67.0 bits (162), Expect = 3.320e-10 Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 436 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLTDHVTAKHNKKKTPAECFP 660
MGGGN QKS TAR RN +K KA KGSQL NK A +I C+VC Q+F+ +++A +H AKH K + + CFP
Sbjct: 1 MGGGNGQKSKTARERNM-EKTKAAKGSQLESNKKAMTIQCKVCMQTFICTTSEAKCKEHAEAKHPKSEL-STCFP 73 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1227.1904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1227.1904.1 >prot_Ecto-sp13_S_contig1227.1904.1 ID=prot_Ecto-sp13_S_contig1227.1904.1|Name=mRNA_Ecto-sp13_S_contig1227.1904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=80bp MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVback to top mRNA from alignment at Ecto-sp13_S_contig1227:3122..6812+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1227.1904.1 ID=mRNA_Ecto-sp13_S_contig1227.1904.1|Name=mRNA_Ecto-sp13_S_contig1227.1904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3691bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1227:3122..6812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1227:3122..6812+ >mRNA_Ecto-sp13_S_contig1227.1904.1 ID=mRNA_Ecto-sp13_S_contig1227.1904.1|Name=mRNA_Ecto-sp13_S_contig1227.1904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=240bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1227:3122..6812+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |