prot_Ecto-sp13_S_contig7792.19039.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7792.19039.1
Unique Nameprot_Ecto-sp13_S_contig7792.19039.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: D7FJQ3_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ3_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 1.240e-202
Identity = 289/303 (95.38%), Postives = 291/303 (96.04%), Query Frame = 0
Query:    1 MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGAEGGAAGQQDVXXXXXXXXXXESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 303
            MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAEL+KARERIRGIQAELREVTRRLTEMNPGG+RWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ GEKFTSWKDVFPVVETGAEGGAAGQQDV          ESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAE GSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR
Sbjct:    1 MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKARERIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ-GEKFTSWKDVFPVVETGAEGGAAGQQDVLPTDSDEDDDESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEEGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 302          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A6H5KZT3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT3_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 2.590e-179
Identity = 280/350 (80.00%), Postives = 286/350 (81.71%), Query Frame = 0
Query:    9 KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGAEGGAAGQQDVXXXXXXXXXX-------------------------------------------------------ESFKADWLSDAESVGSDEVSKLYSEAGDLACSGETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLKKR 303
            KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAEL+KARE+IRGIQAELREVTRRLTEMNPGG+RWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ GEKFTSWKDVFPVVETGAEGGAAGQQDV     XXXXX                                                        + +ADWLSDAESVGSDEVSKLYSEAGDLACS ETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQL+KR
Sbjct:  144 KRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELEKAREKIRGIQAELREVTRRLTEMNPGGLRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ-GEKFTSWKDVFPVVETGAEGGAAGQQDVLPTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNSEADWLSDAESVGSDEVSKLYSEAGDLACSAETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQLEKR 492          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S2SRQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRQ9_9STRA)

HSP 1 Score: 149 bits (375), Expect = 9.990e-39
Identity = 71/163 (43.56%), Postives = 105/163 (64.42%), Query Frame = 0
Query:   31 LLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPE-VFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVF 192
            LL K+RR  H+LQ Y+ +GW+S+ + K+KPT+EL KAR+ +   + E+R +  +++E NPG  +W  +Q D E  I+V+E+ C+ C   +S + +DIL+CD  GCFRAYHQ CL P +  E V   +E DWFC QC+ L  C  ++  E   G+  TSW +VF
Sbjct:  115 LLGKIRRLMHYLQTYEAEGWRSASQAKIKPTSELQKARDDVYAAKHEIRSILTQISEANPGNKKWSCMQGDAEEGIDVEEVGCSICLSLESTEDNDILMCDGEGCFRAYHQRCLQPAVTSEDVAGGDEVDWFCPQCDSLRHCLYLVSVEDVGGKPPTSWAEVF 277          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S1J7G6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7G6_9EUGL)

HSP 1 Score: 124 bits (311), Expect = 5.640e-29
Identity = 65/183 (35.52%), Postives = 102/183 (55.74%), Query Frame = 0
Query:   18 ENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKF--TSWKDVFPVVETG 198
            E+ W+ +  + +  +  +RR+ H L  Y  +G +S+ REKLKP  E+ KA++RI   +  +R++  +L  MN     W     +GE  +   ++ C+ CG  + D  +DIL CD  GC RAYHQ CL P +  E   EEEE W+C QC C+ +C+E +  +F+   ++  T W  V P+ E G
Sbjct:   34 ESVWNGVLRQVRRQVAIVRREQHLLDTYSHEGTRSANREKLKPVQEMQKAQDRIARARQSIRDILAQLAGMNAEHACWLV---EGE-RMHPKDVSCSACGGAECDSENDILCCDAEGCCRAYHQLCLKPHVTTEEHAEEEE-WWCHQCNCMQECYEEINEQFETQYEYPQTPWDQVLPLEEEG 211          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: L1JX63_GUITC (PHD-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JX63_GUITC)

HSP 1 Score: 120 bits (302), Expect = 5.340e-28
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 0
Query:   23 RIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRL----TEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGA 199
            RIR + K  L   R     L  Y+QDGW  S   KLKPT EL K+ E +   + E++E+ +++     E+     R    + + EG +  ++I+C+ CG GD+   +DILLCDY+ C RA+HQ C  P +     P ++EDWFC  C C TDC E +   F  G  +T+W+ +FP +E  A
Sbjct:  134 RIRNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEG-LAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: C1EG75_MICCC (Uncharacterized protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EG75_MICCC)

HSP 1 Score: 122 bits (305), Expect = 1.050e-27
Identity = 60/164 (36.59%), Postives = 99/164 (60.37%), Query Frame = 0
Query:   32 LHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEF--QQGEKFTSWKDVFP 193
            L  +RR+ H +  Y+ DGWK + REKL+P  E+ K++ +I   + ++R++ R + +M+ G V +    E+  G ++V++++C +C  GD+ D +DIL+CD   C RA+HQ C+ PP+K +  P+E   W C  C+   DCF  L  +F  +      SW+DVFP
Sbjct:   81 LSTIRREQHHIDAYEMDGWKGASREKLRPADEIRKSQVKIFNCKLKVRDMFRDI-DMDTGEVSFRDRIEEDTGEVDVEDVVCARCADGDATDENDILICD-GYCDRAFHQRCVVPPVKADEIPDE---WLCPLCDARVDCFYTLNADFDLELDAADASWRDVFP 239          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S4NP67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NP67_GUITH)

HSP 1 Score: 120 bits (302), Expect = 2.590e-27
Identity = 68/181 (37.57%), Postives = 100/181 (55.25%), Query Frame = 0
Query:   23 RIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRL----TEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGA 199
            RIR + K  L   R     L  Y+QDGW  S   KLKPT EL K+ E +   + E++E+ +++     E+     R    + + EG +  ++I+C+ CG GD+   +DILLCDY+ C RA+HQ C  P +     P ++EDWFC  C C TDC E +   F  G  +T+W+ +FP +E  A
Sbjct:  134 RIRNRIKTRLTNARYFQTMLDAYEQDGWGPSSHRKLKPTEELKKSSESLIHAKKEIKELLKQMDPASNELAQKETRIDEREYEAEG-LAFEKIVCSICGTGDARRGNDILLCDYSECNRAFHQKCHHPQVTE--LPHDDEDWFCTHCLCYTDCIEAVNELF--GTHYTTWEKMFPELEENA 309          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7S1G4N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4N2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.730e-26
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   20 RWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQED-------GEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEED-WFCWQCECLTDCFE 173
            ++ + R +    L K+R     +  Y  +GW+ + RE +KP +E+ KAR+ +R  +  LR +   L   N  G    A+  D       G   + ++++ C++CGQ D+DD +DILLCD+AGC RAYHQ C+ PP   E  P+EE D WFC +C C   C E
Sbjct:   19 KFQQYRKRVAATLSKVRYLKTLMDAYASNGWQDAKRESVKPKSEISKARQSLRAAKRLLRTILTAL--WNEDGADRAAVTTDLLRADAAGRELVLMEDMPCSRCGQVDADDDNDILLCDHAGCNRAYHQLCMDPPFPTECIPQEELDPWFCNRCRCFLMCLE 178          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: A0A7R9THL8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9THL8_MICPS)

HSP 1 Score: 113 bits (283), Expect = 1.780e-25
Identity = 65/191 (34.03%), Postives = 102/191 (53.40%), Query Frame = 0
Query:    7 SRKRSRNAS-DGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQ---QGEKFTSWKDVFP 193
            +RK  + A+ D  + + R R K    L  +R+    +  Y  DGW+ + REKL+P  E+ KA+ +I   +  +RE+ + +     G     AI ++ +G ++ +++ C  CG G+S D +DILLCD   C R +HQ C  PP++ E  PE +E W C  C+   DCF  L  +F+      K T + DVFP
Sbjct:   78 ARKNGKRANVDDVSEYKRTRGKIHSQLSAIRQLNAMIDAYDMDGWRGASREKLRPAEEIRKAKIKIFNAKLRVRELFKHIDLAMDGARDLHAITDE-DGELDAEDVFCCACGDGESTDDNDILLCD-GFCDRGFHQRCCVPPVRTEDIPEGDEGWLCALCDARVDCFYTLNADFELELDAGKAT-FADVFP 265          
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Match: UPI000C1CE8F2 (pathogenesis-related homeodomain protein-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE8F2)

HSP 1 Score: 115 bits (288), Expect = 5.310e-25
Identity = 66/189 (34.92%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    8 RKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGWKSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQEDGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKPEVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFT---SWKDVFP 193
            RKR        N + R R   + L+H++R + + +  Y  +GWK    EKLKP  EL +A+  I   +  +RE+ + L +++    +  A   D  G I+ ++I C+KCG  D    +DI+LCD A C R +HQ CL PP+  +  P ++E W C  C+C  DC   L N+FQ G   +   SW+ +FP
Sbjct:  303 RKRKEMNKGPVNEFSRTRTHLRYLMHRIRYEQNLIDAYSAEGWKRQSLEKLKPEKELQRAKSHILDYKLRIRELFQGL-DLSLAVGKLPASLFDSAGEIDSEDIFCSKCGSKDITTGNDIILCDGA-CERGFHQFCLEPPLLKQDIPPDDESWLCPGCDCKVDCIGYL-NDFQ-GTNLSVIDSWEKIFP 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7792.19039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FJQ3_ECTSI1.240e-20295.38PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZT3_9PHAE2.590e-17980.00PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2SRQ9_9STRA9.990e-3943.56Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1J7G6_9EUGL5.640e-2935.52Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
L1JX63_GUITC5.340e-2837.57PHD-type domain-containing protein n=1 Tax=Guillar... [more]
C1EG75_MICCC1.050e-2736.59Uncharacterized protein n=3 Tax=Micromonas TaxID=3... [more]
A0A7S4NP67_GUITH2.590e-2737.57Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1G4N2_9STRA5.730e-2637.04Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9THL8_MICPS1.780e-2534.03Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
UPI000C1CE8F25.310e-2534.92pathogenesis-related homeodomain protein-like n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 9..245
NoneNo IPR availablePANTHERPTHR12628:SF13HOMEOBOX PROTEIN HAT3.1coord: 9..245
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 112..166
e-value: 4.7E-11
score: 52.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 107..169
e-value: 2.2E-12
score: 48.2
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 112..167
e-value: 1.2E-8
score: 34.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 110..168
score: 10.282
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 113..165
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 103..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7792contigEcto-sp13_S_contig7792:2638..6982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7792.19039.1mRNA_Ecto-sp13_S_contig7792.19039.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7792 2638..6982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7792.19039.1 ID=prot_Ecto-sp13_S_contig7792.19039.1|Name=mRNA_Ecto-sp13_S_contig7792.19039.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MCTGECSRKRSRNASDGENRWDRIRAKFKLLLHKMRRDTHFLQVYQQDGW
KSSGREKLKPTAELDKARERIRGIQAELREVTRRLTEMNPGGVRWGAIQE
DGEGNIEVDEIMCTKCGQGDSDDHDDILLCDYAGCFRAYHQNCLSPPIKP
EVFPEEEEDWFCWQCECLTDCFEMLENEFQQGEKFTSWKDVFPVVETGAE
GGAAGQQDVLLTDSDDDDDESFKADWLSDAESVGSDEVSKLYSEAGDLAC
SGETDDGDVGSTAAEGGSLGGGRRSRALARRSKRYAALGLGGDHVAQMQL
KKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD