mRNA_Ecto-sp13_S_contig7790.19038.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A6H5L3X4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3X4_9PHAE) HSP 1 Score: 865 bits (2234), Expect = 1.840e-314 Identity = 464/513 (90.45%), Postives = 470/513 (91.62%), Query Frame = 1
Query: 1 MRLIRGRSVLPVTVSLLLAAAAILLPGAGATSCSVLDSCGACRNTTLCHWCPDQQCHVIGSFHGCAYGTYCYNNNQCQRELPEFKGYEAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAP----PVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNCTQMMQGGKRLQQERPQLRYDQVPELPSDVAGDGGGGVQTEGDEEDRGDARTAAEAVLPPTMGDYVGDKVALMQ 1527
MRLIRGRSVLPVT+SL+LAAAAILLPGAGATSCSVLDSCGACRNTTLCHWCPDQQCHVIGSFHGCAYGTYCYNNNQCQRELPEFKGYEAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSP RSVRLTAAEPSGDGGYMTLAGD XXXXXXX ES V MR GGIGTRGPSGPSAAEEGGA A PVPKGKRDFGRAGARRVGRSTSR XXXXX AL GPSPLARKVYCVTRLVCGTSMAVALL+CGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIE GSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVAD TGYDRSLCNCTQMMQGGK+ QQERPQLRYDQVPELP DVAGDGGGGVQTEG+ EDRGD AAEAVLPPTMGD GD+VAL Q
Sbjct: 1 MRLIRGRSVLPVTMSLVLAAAAILLPGAGATSCSVLDSCGACRNTTLCHWCPDQQCHVIGSFHGCAYGTYCYNNNQCQRELPEFKGYEAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPDRSVRLTAAEPSGDGGYMTLAGDDDSXXXXXXXDD--ESDVHMRGGGIGTRGPSGPSAAEEGGAEAAXXXXXXXXXPVPKGKRDFGRAGARRVGRSTSRXXXXXXXXXXXXXXALPGPSPLARKVYCVTRLVCGTSMAVALLICGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIEMGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADTTGYDRSLCNCTQMMQGGKQPQQERPQLRYDQVPELPFDVAGDGGGGVQTEGEGEDRGDVLPAAEAVLPPTMGDDAGDRVALKQ 511
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: K8Z7T5_NANGC (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7T5_NANGC) HSP 1 Score: 179 bits (453), Expect = 3.480e-47 Identity = 118/400 (29.50%), Postives = 178/400 (44.50%), Query Frame = 1
Query: 88 ATSCSVLDSCGACRNTTL-CHWC-PDQQCHVIGSFHGCAYGTYCYNNNQCQRELPEFKGYEAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADAT 1281
A SC+ C C N+++ CHWC D +CH IGS +GC G CY + C R PE K + APS +VL+G+ + T+LFC A +A EY K + R + D Y L + G+ R SGPS +GG P G D +P E S + +V R ++A +++ V + P P VNVCNT DWGS+ ++ +EAD+Q+L+S+YNPN L+ I +G + H +G + P L+ GG +TD+L+T+ F VW+ L L ++TG L ++D ++ V+W+G + +PFT+ + NY+I V T
Sbjct: 73 AESCANFQDCFTCSNSSISCHWCGKDNKCHAIGSPYGCLTGVNCYGSEACVRSEPEAKPHPAPSGSVLVGLGIFLLTSLFCTSACFFVANEYVKHATVVRMEK----------------------DPNYQELLA------------------FDEEEEGLAGRSRSGPS---KGGGEGVLGERRPQGSGGEDV------------------WDPVPRIRVEERSRFLVVCSQVI---RAALILTLAWLVMVAVAVFLYTPQVPDVNVCNTALDWGSLFTGLERLKLEADYQLLLSVYNPNRLDVAISSGQGVFKHDHEAIGQVEVAPFLIKGGAITDVLVTLVFTPSVWKSLQLDLAFQTGSLMLMVDMNVAGRVIWNGRRLFPFTYGLQNYFIHVGKET 408
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A7S4JFU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JFU8_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.350e-28 Identity = 113/418 (27.03%), Postives = 176/418 (42.11%), Query Frame = 1
Query: 91 TSCSVLDSCGACR-NTTLCHWCP-DQQCHVIGSFHGCAYGTYCYNNNQCQRELPE-FKGYEAPSIAVLLGVFLVGS--TTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRG----PSGPSAAEEGGAATATATAPPVPKGKRDFGRAGARR---VGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNC 1308
TSC+ +C C ++ +C+WC D QCH GS HGC CY+N++C R+ PE K I +L + +VG+ L C A +S+ A T+ + + E G GY + + + G G + +EGG A + + A + + RS +R + A SG + Y VT + T++A +++ F P AP NVCN + W SIV +KS ++A FQ+L+S+ NPN ++ E++ GS H EVG + ++ +TD+L+ +TF + W+ L EY G L F +DAT A+V+ Y F+ I +Y + D DR LC C
Sbjct: 248 TSCAAQKTCSECSLSSFMCNWCAYDNQCHAKGSVHGCLSSVNCYSNSRCTRKGPEPIKRNVFGQIGMLPALAIVGAGMALLCCATACMSVVGCVAG--------------TYDDLTGIMVAEVEDDGRRGYEPPEAEDNADADIDAVASEQVALMPPSSGESGDEECDEVDENEAEEDEGGDEEGVAEPLHIEEHNEVNEEANTQTSFLLWRSRTRRTRRRPRSRSDVARFYSG----CKMCYAVTLVTVMTAVAASII-------FFPKAPDFNVCNDQVAWKSIVDGMKSGKIQASFQLLMSVENPNRMSVEVDMGSGTFKHNGVEVGTFDIPTSTISAMSITDVLVAVTFTPDKWQALALSTEYYKGTLKFAVDAT--ATVVIPSLAGYTFSGGIEDYIVHANDPKLQDRHLCVC 638
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A3R7NH87_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NH87_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.240e-25 Identity = 111/415 (26.75%), Postives = 172/415 (41.45%), Query Frame = 1
Query: 94 SCSVLDSCGACRNTTL-CHWCP-DQQCHVIGSFHGCAYG-TYCYNNNQCQRELPEFKGY-EAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRDF-GRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPAL-LAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNCTQMM 1320
+C+ C +C N + CH+C D QCH IGS GCA G + C++ C+R P++ GY PS+ + + +V T FCGI+ +I + +E R+ L + S R + +P TL D E +R+G + R F + R +SR R R+V T T + + + M + + F P P NVCN EF+W SI+HS+ S + D+QILVS+ N N +E+G A +YH T VG E A G ++D + I + E L ++ +L F ++A+I+ S+ W YK Y + S + ++ YDR LC CT+ +
Sbjct: 28 TCASHKDCDSCLNASYTCHFCQSDFQCHTIGSISGCAVGVSACHHLEDCERSDPQYVGYGPPPSVVIAVLCLIVTLTCCFCGIS--AICSVFCRERKPPSRRAELAAALKA---SKRNKSKKP-------TLKDDEDRAQAQRQPLLLEE----IREGEV------------------------------RLFENEVDQESLERLSSRYRQDE------------------RQVSWQTFAARTTWLTLLITMTVLALMFYPRVPDYNVCNREFEWESILHSMMSLTPKVDYQILVSVINENRFGFVLESGRADIYHNSTLVGKWELEKEWEAAAGSISDKIAAINIEPGFAEGIALWQDFSRNELIFRINASITGSITWGRYKIYRISSSTPD--VEFLVGAEYDRGLCKCTEFL 376
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A7S2XY72_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY72_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.460e-25 Identity = 63/196 (32.14%), Postives = 113/196 (57.65%), Query Frame = 1
Query: 748 LSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIG-FAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGY------VTDILLTITFK-TEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYD-RSLCNC 1308
LS +P A+ ++ R VC + + ++ V++G ++PH P + +CNTE DWGSI+ + VEA+ ++LVS+YNPN++ +++ S ++ H ++G + E GG+ V+DIL+T F T V + L EY+ G L ++D ++ +++ ++ PF + ++NY+I V + + D R LCNC
Sbjct: 54 LSHTAPAAQNLHACAR-VCCVLVVLVVMTVSVLLGLYSPHYPQLGICNTELDWGSILRGLVKMKVEAEAEVLVSVYNPNLIAMDLKHLSGVMKHDGQQIGTL--EAGGARGGFLIGALSVSDILVTTRFMMTSVQKSVQLEAEYQMGSLLLMVDLSLEGALLIGSHQVSPFQYGLSNYFIHVNEYSSDDNRQLCNC 246
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A7S2U998_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U998_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.100e-24 Identity = 124/440 (28.18%), Postives = 175/440 (39.77%), Query Frame = 1
Query: 94 SCSVLDSCGACRNTTL-CHWCP-DQQCHVIGSFHGCAYGTYCYNNNQCQRELPE------FKGYEAPSIAVLL---GVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGP-------SPLARKVYCVTRLVCGTSMAVALLMCGV-------VIGFA--------PHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNCTQ 1314
SC+ C C ++ CHWC D CH GS +GC G CY+ ++C R P+ F G + ++L G L ST F GI A E A+T N +P R PS M L +G+ ++ G+ E+ G A ATA A K+++ +A S S +P + GP S L TR T M+ C + ++GF P P NVC+ W SIV S+ S VEA F+ILVS+ NPN L+ ++ G YH D VG + + +A ++D+L+ TF + WE L EY G L FL+++ A+V Y F I+N ++V D DR LC C Q
Sbjct: 36 SCASHHDCSPCALSSWGCHWCAHDNACHTKGSMYGCTVGVDCYSADRCMRTKPDPLDKFVFTGIGPLPLFIILFLAGTCLCCSTLCFALAGGIKGAYEDLANMAST---NPAYTNMANPDRDTE----RPSN---VMEL------------------TGISVQQDGLDDDA----DFPEDEGEAVATAPA----ARKKEWWKAPNPFGSSSISSKPSRGGYMPLSPGGLDDGPEFSVSAMSQLHESSAPNTRNKGSTHMSCLYNACRICYLLTVFIVGFFAFFSVRYFPKIPDYNVCSDGLAWKSIVDSLTSLKVEASFEILVSVENPNHLDIVLDLGKGTFYHADAFVGTFSIPTSTIAAMSISDVLIVATFSPDRWEALSLTSEYYKGTLKFLVNS--QATVRIPSLANYAFESKISNMIVQVNDPKLDDRHLCACPQ 437
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A5D6XXA1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXA1_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.860e-23 Identity = 122/443 (27.54%), Postives = 180/443 (40.63%), Query Frame = 1
Query: 16 GRSVLPVTVSLLL---AAAAIL----LPGAGA-TSCSVLDSCGACRNTTL-CHWCP-DQQCHVIGSFHGCAYG-TYCYNNNQCQRELPEFKGY-EAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLA-GGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCN 1305
RS+ VT LLL AA A+ LP G T C+ +C C + CH+C D QCH IGS GC G + C++ C+R++P++ GY PS+ + + +V T CG+A I + K+ + +A S +LT + + + D + SG A E R ARR A + S S R VT ++ + V LM F P P NVCN EFDW SI+ S++S + ++Q+L+S N N +E G A +YH + VG E L A G +TD++ I + E L + +L F ++ATIS S+MW +K Y + S+++ I+ YDR LCN
Sbjct: 9 SRSLALVTALLLLLVTAATAVAPLSALPANGPYTPCADYKTCDECVAASYTCHFCEFDFQCHAIGSPSGCLTGISTCHHLEDCKRQVPQYVGYGPPPSVVIAVLCLVVTLTCCVCGVAAICSVFLHRKKRRSEYPDDAPAARXXXXXXSKKLTRS--------VDVDADAESQEEPLLSDTSEHEITEFEE--------SGDHAVLE---------------------RLQARR-----------------ARERSFSWRSFFVR----VTGILSLVGITVFALM------FYPRVPDYNVCNREFDWESILQSLRSFHPKIEYQVLISAINENRFGFLLEEGKADIYHNGSRVGYWKLEAPLEAKAGAITDVIAPIRIEPGYSEAYSLWTAFRNNELIFRINATISGSIMWGSHKVYDISTSVDD--IEFLVGAEYDRGLCN 385
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A329SM72_9STRA (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A329SM72_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.740e-23 Identity = 107/414 (25.85%), Postives = 163/414 (39.37%), Query Frame = 1
Query: 94 SCSVLDSCGACRNTTL-CHWCP-DQQCHVIGSFHGCAYG-TYCYNNNQCQRELPEFKGY-EAPSIAVLLGVFLVGSTTLFCGIAGISIAREYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFE-PALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNCTQMM 1320
+C+ C +C N ++ CH+C D QCH IGS GC G + C++ C+R P++ GY PS+ + + +V T FCGI+ I R++ A R + S E VL+ + + +A R+ RTR E A +V T L SM V LM F P P NVCN EF+W SI+HSI + ++Q+LVS+ N N +E+GSA +YH T VG + P G ++D++ I + E L ++ +L F ++ATI+ S+ W +K Y + S + ++ YDR LC CT+ +
Sbjct: 23 ACASHKDCDSCLNASVACHFCKSDFQCHAIGSPFGCPVGVSVCHHLEDCERSDPQYVGYGPPPSVVIAVLCLMVTLTCCFCGISAIC-------SVFCRRKKPASRHASLSAALETDKXXXXXXXXXXXXXXXERAQAQRQPLLLGEIREGEVLLFEN---------------------------------EVDQASLERL-----RTRYEED-------ERQFNWKAFASRV---TWLTVTISMTVLALM------FYPRMPDYNVCNREFEWESILHSILGLEPKVEYQVLVSVINENRFGFVLESGSADIYHNSTLVGKWELDKPWEAKAGSISDVIAGINIRPGYAEGIALWKDFSKNELIFRINATITGSITWGRHKIYRISSSTPD--VEFLVGAEYDRGLCKCTEYL 373
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: B7FY96_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY96_PHATC) HSP 1 Score: 112 bits (280), Expect = 9.590e-23 Identity = 113/429 (26.34%), Postives = 176/429 (41.03%), Query Frame = 1
Query: 91 TSCSVLDSCGACR-NTTLCHWCP-DQQCHVIGSFHGCAYGTYCYNNNQCQRELPE------FKGYEAPSIAVLLGVFLVGS------TTLFCGIAGISIAREYAKESAAT---RRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRGPSGPSAAEEGGAATATATAPPVPKGKRD---FGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKV-YCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAFEPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDA--TISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNC 1308
+ C ++C C ++ LCHWC D CH IGS +GC G CY+N +C R++PE F + + ++L V LVGS ++ FC +G+ A + + A T R V P V+ T EP + GD E + + D A E + T P V + + G + + + + P + P + R CV + T++ V L++ I + P AP N+CN W S++ S+ S V ADF++L SI NPN + ++ G H VG P +TD+++ +F + W+ L EY G+L +DA TI V+ Y FT ++ N ++V + DRSLC C
Sbjct: 139 SGCLQHETCSDCALSSKLCHWCGHDNACHAIGSVYGCVTGVDCYSNERCHRKVPEALNKHDFTFTQMGFLPMML-VILVGSCLFCCLSSCFCVASGVKGAYDDLADLATTDHRRYDGDDLVALGEPLLMVQSTENEP------VATDGDSDNAREPTQGQVDTEQPLNVTD------------EANEDQLSPETEETPLVEGQENNPIATGYVQLCDMFHTPAGQQPELVLAPPRHSIRSRQPRHMQRLYNMCVVMYILLTTLVVGLVV--AAIRYYPKAPVYNICNDSVAWKSLIDSMASMKVSADFELLASISNPNHFDVALDMGKGSFTHDHAFVGTFEIPPVTAKAMSITDMMIIASFSPDKWDALSLTAEYYRGKLVLAVDAEATIRVPVL----ADYSFTTTVKNMKVRVNEMA--DRSLCAC 540
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Match: A0A7S2MD85_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MD85_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.280e-22 Identity = 129/480 (26.88%), Postives = 194/480 (40.42%), Query Frame = 1
Query: 94 SCSVLDSCGACR-NTTLCHWCP-DQQCHVIGSFHGCAYGTYCYNNNQCQRELPEFK--------GYEAPSIAVLLGVFLVGSTT---------------LFCGIAGISIAR---------------------------EYAKESAATRRQNALRVTTFSPGRSVRLTAAEPSGDGGYMTLAGDXXXXXXXXXXXXXXESGVLMRDGGIGTRG------------------PSGPS--AAEEGGAATATATAPPVPKGKRDFGRAGARRVGRSTSRTRXXXXXLPAAAAEALSGPSPLARKVYCVTRLVCGTSMAVALLMCGVVIGFAPHAPGVNVCNTEFDWGSIVHSIKSAGVEADFQILVSIYNPNVLNAEIETGSALLYHGDTEVGVMAF-EPALLAGGYVTDILLTITFKTEVWEEAHLGLEYETGQLAFLMDATISASVMWHGYKTYPFTFSINNYYIKVADATGYDRSLCNCTQ 1314
SC+ +C C ++ CHWC D +CH +GS HGCA G C +N+QC+R+ P+ G+ I +L+G F++ + +F ++ S+A E KE+ T R +LR S + + GDG + DXXXXXXXXXXXXXX P G EE + P GK DF + R + R + G S AR+++ + + ++ + L + + F P P NVCN EF W SI+ S+KS +EA ++L+SIYNPN + +++ GS H D VG + + +TD+ L T + WE L EY G L ++DA + A + Y F ++++Y ++V D DR LC C Q
Sbjct: 15 SCASHTNCTECALSSHFCHWCAFDDKCHAVGSLHGCATGVSCLDNDQCKRQHPKKVRKFVFTSIGFIPFIIIMLIGAFVILCASGCYAASSCIRGAYDDMFIHVSNASLAGGMSLGEIRGADEEETDSLISNLEGGRDENEKETQKTSRLESLRSMFSSKEDTCHSNTKDDVGDGLSLGEERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKPRGQEYILLEESEKKQEVKSTP----GKVDFDSSSVRHISR-------------------IEG-SDNARRLFNLCKACYIATVVITLAIVSSSVIFYPKLPEYNVCNQEFQWKSIIDSMKSTELEASIEVLLSIYNPNHFDVDLDKGSGTFKHNDKIVGNWKIPDGTAIKASSITDLPLRCTVIPDEWEAVALAKEYYQGTL--VLDAQVEAKIRMPSLFNYTFKANMDDYTVRVNDPNMMDRHLCACPQ 468 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7790.19038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7790.19038.1 >prot_Ecto-sp13_S_contig7790.19038.1 ID=prot_Ecto-sp13_S_contig7790.19038.1|Name=mRNA_Ecto-sp13_S_contig7790.19038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=510bp MRLIRGRSVLPVTVSLLLAAAAILLPGAGATSCSVLDSCGACRNTTLCHWback to top mRNA from alignment at Ecto-sp13_S_contig7790:2449..6747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7790.19038.1 ID=mRNA_Ecto-sp13_S_contig7790.19038.1|Name=mRNA_Ecto-sp13_S_contig7790.19038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4299bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7790:2449..6747+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7790:2449..6747+ >mRNA_Ecto-sp13_S_contig7790.19038.1 ID=mRNA_Ecto-sp13_S_contig7790.19038.1|Name=mRNA_Ecto-sp13_S_contig7790.19038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1530bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7790:2449..6747+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |