prot_Ecto-sp13_S_contig7786.19032.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7786.19032.1
Unique Nameprot_Ecto-sp13_S_contig7786.19032.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length214
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7786.19032.1 vs. uniprot
Match: A0A6H5K1B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B4_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 8.100e-30
Identity = 88/97 (90.72%), Postives = 89/97 (91.75%), Query Frame = 0 
Query:   37 EGAPGAAPREGQEGDAGRAAAEDGHRDARSERYGEAEAXXXXXXXXXXXXXXXXXXXEAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEK 133
            EGAPGAAP EGQEGDAGRAAAEDGHR ARSE Y EAEAX  XXXXXXXXXXXXXXX EAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQ E+
Sbjct:  837 EGAPGAAPGEGQEGDAGRAAAEDGHRGARSEGYDEAEAXAAXXXXXXXXXXXXXXXAEAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQEEE 933
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BLAST of mRNA_Ecto-sp13_S_contig7786.19032.1 vs. uniprot
Match: D7FHF4_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF4_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.610e-25
Identity = 85/106 (80.19%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:   37 EGAPGAAPREGQEGDAGRAAAEDGHRDARSERYGEAEAXXXXXXXXXXXXXXXXXXXEAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEKSFKSYRHRK 142
            EGAPGAA            AA DGHR ARSE Y EAE XXXXXXXXXXXXXXX    EAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEKSFKSYRHRK
Sbjct: 1074 EGAPGAALXXXXXXXXXXXAA-DGHRGARSEGYNEAEXXXXXXXXXXXXXXXXREKAEAKEVDLLRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEKSFKSYRHRK 1178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7786.19032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K1B4_9PHAE8.100e-3090.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHF4_ECTSI1.610e-2580.19Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7786contigEcto-sp13_S_contig7786:243..2540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7786.19032.1mRNA_Ecto-sp13_S_contig7786.19032.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7786 243..2540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7786.19032.1 ID=prot_Ecto-sp13_S_contig7786.19032.1|Name=mRNA_Ecto-sp13_S_contig7786.19032.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp
SAAAAASAGGSSSPTTAITMAGGGTREGTSSSDGGGEGAPGAAPREGQEG
DAGRAAAEDGHRDARSERYGEAEAEAAEAAREAEAEAEAREKAEAKEVDL
LRKLAVGLHPVLLVEPLTTVREVTKWYTVQLEKSFKSYRHRKKKEKQAAL
EARNRAGGGPADASAAAAAAAASPTGASYESPAAAGLSALMSRRKMVEQR
TKAGAGAAAGGVDD
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