prot_Ecto-sp13_S_contig7780.19029.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7780.19029.1
Unique Nameprot_Ecto-sp13_S_contig7780.19029.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length444
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7780.19029.1 vs. uniprot
Match: A0A6H5JCV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV8_9PHAE)

HSP 1 Score: 433 bits (1113), Expect = 4.030e-142
Identity = 293/383 (76.50%), Postives = 300/383 (78.33%), Query Frame = 0 
Query:    1 LKVDSLLDELYVLFSPRVFLLADVKPLVDESYHQRIDELCDKARTGGSXXXXXXXX-DGLSFPPTLDALASSPGSSNGNNINSRTAAGIGGGSGIKAEPRSTNPIRGGSGAGSEAEASAAGXXXSEARSGTSSLLSPPTMVDATSGGGSSGKASAPARSNDELEGMLSLRRGKESSPSTRVLSSDVANTTDMADLLSGIEPGVDAALLDFMMCDNDNTPVLGAAAPPAEPPTLNXXXXXXXXXXXXPWAFSSPFPPTMEPVIPRGNRATSGTSPTKKRRASEDCSSSVPAAAGRMSAGSTDATGNSDNNDSGDDRTTSPSMMWSRVGSAPNLTNLSCRIQATLPSAHSRGQQQXXXXXXXXXXXXXXXXXXRCSVAISSGGTS 382
            L VD+ LDELYVLFSPRV+LLADVKPLVDESYHQRIDELCDKARTGGSXXXXXXXX DGLSFPPTL+ALASSPGSSNGNNINSRTA G GGGSGIKAEPRSTNPIRGGSGA          XX SEARSGTSSLLS PTM DATS GGSSGKASAPARSNDELEGML  RRGKES    RVLSSDVA+TTDMADLLSGIEPGVDA                                         PW  S PF PTMEPVIP  N ATSGTSPTKKRR SED SS VPAAAGRMSAGSTDA  NSDNN+SGD RT SPSM+WSRVGSAPNLTNLS  IQATLPSAHSRGQQ XXXXXXXXXXXXXXXXXXRCSVAIS+GGTS
Sbjct:   46 LNVDAFLDELYVLFSPRVYLLADVKPLVDESYHQRIDELCDKARTGGSXXXXXXXXXDGLSFPPTLNALASSPGSSNGNNINSRTAPGTGGGSGIKAEPRSTNPIRGGSGAXXXXXXXXXXXXSSEARSGTSSLLSSPTMADATSSGGSSGKASAPARSNDELEGMLFRRRGKES----RVLSSDVADTTDMADLLSGIEPGVDA-----------------------------------------PWVVSGPFSPTMEPVIPSCNGATSGTSPTKKRRVSEDRSSCVPAAAGRMSAGSTDAAANSDNNNSGDGRTASPSMIWSRVGSAPNLTNLSFSIQATLPSAHSRGQQXXXXXXXXXXXXXXXXXXXRCSVAISNGGTS 383
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7780.19029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCV8_9PHAE4.030e-14276.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7780contigEcto-sp13_S_contig7780:484..2542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7780.19029.1mRNA_Ecto-sp13_S_contig7780.19029.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7780 484..2542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7780.19029.1 ID=prot_Ecto-sp13_S_contig7780.19029.1|Name=mRNA_Ecto-sp13_S_contig7780.19029.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
LKVDSLLDELYVLFSPRVFLLADVKPLVDESYHQRIDELCDKARTGGSGG
GGGGGGDGLSFPPTLDALASSPGSSNGNNINSRTAAGIGGGSGIKAEPRS
TNPIRGGSGAGSEAEASAAGGGSSEARSGTSSLLSPPTMVDATSGGGSSG
KASAPARSNDELEGMLSLRRGKESSPSTRVLSSDVANTTDMADLLSGIEP
GVDAALLDFMMCDNDNTPVLGAAAPPAEPPTLNIQQQQPQQQQQQPWAFS
SPFPPTMEPVIPRGNRATSGTSPTKKRRASEDCSSSVPAAAGRMSAGSTD
ATGNSDNNDSGDDRTTSPSMMWSRVGSAPNLTNLSCRIQATLPSAHSRGQ
QQQLQPASSSATATTSTPRPRCSVAISSGGTSKKQSTTGRPPSGASANRG
GGGNLQMQQAVVGGGGVSGGSPSNSTGGSEKSSGGGGSSSNNAM
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