mRNA_Ecto-sp13_S_contig778.19028.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig778.19028.1
Unique NamemRNA_Ecto-sp13_S_contig778.19028.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: D7FI57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI57_ECTSI)

HSP 1 Score: 634 bits (1636), Expect = 4.430e-217
Identity = 433/502 (86.25%), Postives = 448/502 (89.24%), Query Frame = 1 
Query:  172 MSAAPMDGLSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGG-DALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVAAGF-LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYLEPHRAELLSLLMKLLADESEPVRGEADRTLEGLGEAWAESSDNPSASTSEXXXXXNCSPPVPPLPTGLGITPARKTPPARPAVAAVRALCVSLLPSIMPAAIDEASHWTVRGRRRALWLLCFLVRYAGEEVTPYLPQLLASLGEAS 1671
            MSAAPMDGLSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSR+LSERLVGMMADPVEKCREMAGGLL EFVD+VGG DALP+ TALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRG SAE+FGCEIAGEAC VLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVAAGF   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      KYLEPHRAELLSLLMKLLADESEPVRG A R LEGLGEAWA SSDNPSA+T+E  XX NCSPPVP L                    AVRALCV LLPS+MPAAI+EASHWTVRGRRRAL LLCFL++    EV   + +  A++GEA+
Sbjct:    1 MSAAPMDGLSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRYLSERLVGMMADPVEKCREMAGGLLAEFVDSVGGGDALPDTTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGKSAEIFGCEIAGEACRVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVAAGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTKQKKKYLEPHRAELLSLLMKLLADESEPVRGGAGRALEGLGEAWARSSDNPSAATTEQQXXQNCSPPVPXLXXXXXXXXXXXXXXXXXXXXAVRALCVPLLPSMMPAAIEEASHWTVRGRRRALQLLCFLLQDDEVEVRQAVDECAAAIGEAA 502
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A6H5KZU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU8_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 5.790e-116
Identity = 186/203 (91.63%), Postives = 191/203 (94.09%), Query Frame = 1 
Query:  172 MSAAPMDGLSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKV 780
            MS APMDGLSLSDEASLSH+RQRLQRDLNCLSDPDRSTRKRALTKL+KALFREAKV EAVLR F SRHLSERLVGMM DPVEKCREMAGGLLLE VDAVGGDALP+ TALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRG  AE+F  EIAGEACGVLSAALTDPFPEAKRECCSLLLRLA VCPEGL+SRLGKV
Sbjct:    1 MSVAPMDGLSLSDEASLSHMRQRLQRDLNCLSDPDRSTRKRALTKLEKALFREAKVSEAVLRVFFSRHLSERLVGMMTDPVEKCREMAGGLLLELVDAVGGDALPDTTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGKGAEIFVGEIAGEACGVLSAALTDPFPEAKRECCSLLLRLAGVCPEGLQSRLGKV 203
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A6H5KK84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK84_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.940e-72
Identity = 131/150 (87.33%), Postives = 136/150 (90.67%), Query Frame = 1 
Query: 1225 KYLEPHRAELLSLLMKLLADESEPVRGEADRTLEGLGEAWAESSDNPSASTSEXXXXXNCSPPVPPLPTGLGITPARKTPPARPAVAAVRALCVSLLPSIMPAAIDEASHWTVRGRRRALWLLCFLVRYAGEEVTPYLPQLLASLGEASR 1674
            KYLEPHRAELLSLLMKLLADESEPVRGEA R LEGLGEAW  SSDNPSA+++E     NCSPPVPPLPT  GITPAR TPPARPA AAVRALCVSLLPS+MPAAI+EASHWTVRGRRRALWLLCFLVRYAG EVTPYLPQLLASLGEASR
Sbjct:   49 KYLEPHRAELLSLLMKLLADESEPVRGEAGRALEGLGEAWDRSSDNPSAASTEQEQQQNCSPPVPPLPTDPGITPARTTPPARPAAAAVRALCVSLLPSMMPAAIEEASHWTVRGRRRALWLLCFLVRYAGHEVTPYLPQLLASLGEASR 198
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A397AHC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AHC5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.440e-42
Identity = 101/247 (40.89%), Postives = 144/247 (58.30%), Query Frame = 1 
Query:  241 LQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLAS 981
            LQRD+NCLSDP R  RK++L KL +     AK  +  L  F    L + L+  +ADPVEKCRE++    +EF      ++   + AL   ++     R+G  P VE AEE+R LLL L  AVL+    E     +  E   VL    +DPFP+AK+ CC   L LA      ++  LG V++PL +NLGHQH+K RQ TLQAL A++ CGS  L + +++++LP L  +L+DR+ +VR++LV    S
Sbjct:   22 LQRDVNCLSDPQRMVRKKSLEKLSQVSDLVAKFGQDHLLQFFHAQLMKPLLVCVADPVEKCRELSLRGSIEFAKLGAFNSEERVRALILAIYG----RVGKAPFVETAEEIRLLLLELLHAVLQRTPTEQ---SLPAEVMDVLGKTASDPFPDAKKACCDATLVLAHKWKPLVKLHLGTVVKPLTMNLGHQHAKIRQCTLQALEAVVPCGSSSLPELMKDILLPNLSKVLFDRSPSVRKQLVQTTGS 261
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: M4BI61_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI61_HYAAE)

HSP 1 Score: 162 bits (410), Expect = 8.000e-42
Identity = 106/272 (38.97%), Postives = 160/272 (58.82%), Query Frame = 1 
Query:  196 LSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREA-KVPEAVLRGFLSRHLSERLVGMMA-DPVEKCREMAGGLLLEFVDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGC-----EIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVA 990
            LS  +EA+ + L  R+QRD+NCL+D DR+ R+R + KL +AL  EA +V +AVLR     HL   L+     D VEKCRE A  LLL   +     AL +     K+V ++ + R+G+ P  EP EE+R LLL+L  A L+   A ++G      ++  E    LS    DPFP+AK+     ++ +A      LR ++G ++RP+I NLGHQHS+ R   LQAL A + C S+ L   ++EL+LP +  ++ D++ +VR++LV  LA+ +A
Sbjct:    3 LSPEEEAAYNMLCMRIQRDVNCLTDADRTVRRRGVDKLHRALQYEASRVSDAVLRALCVSHLLRPLLQCAERDVVEKCREQALRLLLVLCEH---GALEQSNTTLKEVVALIDARLGTFPFPEPTEEIRLLLLQLLYAFLK-QLAAVYGTPTSLQDVITELANTLSKTAVDPFPDAKKMSAECVILIARTWKHDLRLQIGTIVRPMIANLGHQHSRVRVCALQALEAAVPCASEALQHLMKELLLPAVSKVVLDQSPSVRKQLVITLATWMA 270
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A418CWG4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CWG4_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.850e-41
Identity = 101/247 (40.89%), Postives = 144/247 (58.30%), Query Frame = 1 
Query:  241 LQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLAS 981
            LQRD+NCLSDP R  RK++L KL +     AK  +  L  F    L + L+  +ADPVEKCRE++    +EF      ++   + AL   ++     R+G  P VE AEE+R LLL L  AVL+    E     +  E   VL    +DPFP+AK+ CC   L LA      ++  LG V++PL +NLGHQH+K RQ TLQAL A++ CGS  L + +++++LP L  +L+DR+ +VR++LV    S
Sbjct:   10 LQRDVNCLSDPQRMVRKKSLEKLSQVSDLVAKFGQDHLLQFFHAQLMKPLLVCVADPVEKCRELSLRGSIEFAKLGAFNSEERVRALILAIYG----RVGKAPFVETAEEIRLLLLELLHAVLQRTPTEQ---SLPAEVMDVLGKTASDPFPDAKKACCDATLVLAHKWKPLVKLHLGTVVKPLTMNLGHQHAKIRQCTLQALEAVVPCGSSSLPELMKDILLPNLSKVLFDRSPSVRKQLVQTTGS 249
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A1W0A2N6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2N6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.940e-40
Identity = 103/253 (40.71%), Postives = 150/253 (59.29%), Query Frame = 1 
Query:  241 LQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEF--VDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNS-AEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVA 990
            LQRD+NCL DP RS RKR+L KL        K  +  L  F+  H+ + LV  +ADP+EKCRE++     E+  V A+ GD   +   +A         RIG  P VE +EE+R +LL L   VL+ +  A +  C   G+   VL+    DPFP+AKR CC  +L +A   P  ++  L  +++PL LNLGHQH+K RQ TLQAL A++ CGS  L + +++++LP L  +++DR+ AVR++LV  +A+  A
Sbjct:    8 LQRDVNCLKDPQRSVRKRSLEKLSHVSDLVRKFGQDALVCFMQSHMFQPLVECIADPIEKCRELSILTCKEYAKVGAMQGDGREKALIIA------IHARIGKSPFVETSEELRLMLLELLQLVLQASDIATLENC--IGDVMEVLAKTAADPFPDAKRVCCDTVLVVAQKWPIQVKMHLATLVKPLTLNLGHQHAKVRQCTLQALEAIVPCGSTTLPELMKDILLPNLSRVVFDRSAAVRKQLVQTIATWYA 252
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A835Z7Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.770e-40
Identity = 107/257 (41.63%), Postives = 145/257 (56.42%), Query Frame = 1 
Query:  217 SLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGGDALPEMTA-LAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCE----------------IAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYD 936
            +L  L  +LQRD+NCLSDPDR+TR+RAL+KL K L       +      L  + ++    ++ DPVEKCRE++ GLL+  V     +  P++T  L + +      RIGS P+ E AEEVR LLL+L   +    SA  +                    +G A  VL+ AL DPFP+AKRECC LL R+  V PEG+R  LG++LRPL+ NL           ++ L  LL CG+DDL KPL EL+LPQL  L++D
Sbjct:   28 ALHQLTLKLQRDVNCLSDPDRTTRRRALSKLDKVLVGADSSKDGSYASVLGAYFTQ----LLRDPVEKCRELSAGLLISLVART--EDTPDVTLPLVEVIVPTVCARIGSTPVEETAEEVRLLLLKLLTVLWSRESAVAWASPKSTATSXXXXXXXXXXXSGTA-DVLATALADPFPDAKRECCVLLRRVVQVTPEGVRLHLGRLLRPLVGNL-----------VEGLSLLLACGADDLAKPLEELVLPQLNKLVFD 266
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A397D496_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D496_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.670e-40
Identity = 101/247 (40.89%), Postives = 144/247 (58.30%), Query Frame = 1 
Query:  241 LQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLAS 981
            LQRD+NCLSDP R  RK++L KL +     AK  +  L  F    L + L+  +ADPVEKCRE++    +EF      ++   + AL   ++     R+G  P VE AEE+R LLL L  AVL+    E     +  E   VL    +DPFP+AK+ CC   L LA      ++  LG V++PL +NLGHQH+K RQ TLQAL A++ CGS  L + +++++LP L  +L+DR+ +VR++LV    S
Sbjct:   10 LQRDVNCLSDPQRMVRKKSLEKLSQVSDLVAKFGQDHLLQFFHAQLMKPLLVCVADPVEKCRELSLRGSIEFAKLGAFNSEERVRALILAIYG----RVGKAPFVETAEEIRLLLLELLHAVLQRTPTEQ---SLPAEVMDVLGKTASDPFPDAKKACCDATLVLAHKWKPLVKLHLGTVVKPLTMNLGHQHAKIRQCTLQALEAVVPCGSSSLPELMKDILLPNLSKVLFDRSPSVRKQLVQTTGS 249
[Close]
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Match: A0A6G0XR12_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR12_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.490e-40
Identity = 101/249 (40.56%), Postives = 143/249 (57.43%), Query Frame = 1 
Query:  241 LQRDLNCLSDPDRSTRKRALTKLQKALFREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEF--VDAVGGDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNSAEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRLGKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLAS 981
            LQRD+NCLSDP R  RKR+L KL +     AK  +  L  F    L + LV  +ADPVEKCRE++     EF  + AV G+ +         +  M   R+G  P VE AEE+R L+L L  AV++    E     +  E   +L  A TDPFP+AKR CC   L +A      ++  LG V++P  +NLGHQH+K RQ +LQAL A++ CGS  L + +++++LP    +++DR+  VR++LV   AS
Sbjct:    9 LQRDVNCLSDPQRMVRKRSLEKLSQVSDLAAKFGQDQLVLFFQAQLFKPLVQCIADPVEKCRELSLRTCKEFAKLGAVHGETM------VNDLIHMMHTRVGKTPFVEAAEEIRLLILELLHAVIQTTPPEQL---LPAEIMDILGKAATDPFPDAKRACCDATLAVAQKWKPLIKQHLGTVVKPHAMNLGHQHAKIRQCSLQALEAVVPCGSSSLPELMKDILLPNFIKVMFDRSPVVRKQLVQTTAS 248
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig778.19028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI57_ECTSI4.430e-21786.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZU8_9PHAE5.790e-11691.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK84_9PHAE1.940e-7287.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A397AHC5_9STRA2.440e-4240.89Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
M4BI61_HYAAE8.000e-4238.97Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A418CWG4_9STRA4.850e-4140.89Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A1W0A2N6_9STRA1.940e-4040.71Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A835Z7Y2_9STRA2.770e-4041.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A397D496_9STRA3.670e-4040.89Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A6G0XR12_9STRA4.490e-4040.56Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig778contigEcto-sp13_S_contig778:11929..21365 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score642.9
Seed ortholog evalue1.3e-181
Seed eggNOG ortholog2880.D7FI57
Preferred nameHEATR2
Model size1689
KEGG koko:K19759
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007600,GO:0007605,GO:0007610,GO:0007626,GO:0008150,GO:0008344,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030534,GO:0032501,GO:0034622,GO:0035082,GO:0036158,GO:0036159,GO:0040011,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0044782,GO:0045505,GO:0048870,GO:0050877,GO:0050954,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097722,GO:0120031,GO:0120036
Exons10
EggNOG free text desc.inner dynein arm assembly
EggNOG OGs2CMTW@1,2QRXT@2759
Cds size1518
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig778.19028.1prot_Ecto-sp13_S_contig778.19028.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig778 13313..21365 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464048.6078897-UTR-Ecto-sp13_S_contig778:11928..120491681464048.6078897-UTR-Ecto-sp13_S_contig778:11928..12049Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig778 11929..12049 +
1681464048.621696-UTR-Ecto-sp13_S_contig778:13262..133121681464048.621696-UTR-Ecto-sp13_S_contig778:13262..13312Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig778 13263..13312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464048.638963-CDS-Ecto-sp13_S_contig778:13312..134771681464048.638963-CDS-Ecto-sp13_S_contig778:13312..13477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 13313..13477 +
1681464048.6542487-CDS-Ecto-sp13_S_contig778:14064..141671681464048.6542487-CDS-Ecto-sp13_S_contig778:14064..14167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 14065..14167 +
1681464048.6671877-CDS-Ecto-sp13_S_contig778:14694..147651681464048.6671877-CDS-Ecto-sp13_S_contig778:14694..14765Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 14695..14765 +
1681464048.6822739-CDS-Ecto-sp13_S_contig778:15379..155111681464048.6822739-CDS-Ecto-sp13_S_contig778:15379..15511Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 15380..15511 +
1681464048.6915853-CDS-Ecto-sp13_S_contig778:16099..162341681464048.6915853-CDS-Ecto-sp13_S_contig778:16099..16234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 16100..16234 +
1681464048.7036328-CDS-Ecto-sp13_S_contig778:16822..168881681464048.7036328-CDS-Ecto-sp13_S_contig778:16822..16888Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 16823..16888 +
1681464048.7176545-CDS-Ecto-sp13_S_contig778:19551..196351681464048.7176545-CDS-Ecto-sp13_S_contig778:19551..19635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 19552..19635 +
1681464048.7273002-CDS-Ecto-sp13_S_contig778:20269..206801681464048.7273002-CDS-Ecto-sp13_S_contig778:20269..20680Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 20270..20680 +
1681464048.7375643-CDS-Ecto-sp13_S_contig778:21014..213651681464048.7375643-CDS-Ecto-sp13_S_contig778:21014..21365Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig778 21015..21365 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig778.19028.1

>prot_Ecto-sp13_S_contig778.19028.1 ID=prot_Ecto-sp13_S_contig778.19028.1|Name=mRNA_Ecto-sp13_S_contig778.19028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=506bp
MSAAPMDGLSLSDEASLSHLRQRLQRDLNCLSDPDRSTRKRALTKLQKAL
FREAKVPEAVLRGFLSRHLSERLVGMMADPVEKCREMAGGLLLEFVDAVG
GDALPEMTALAKQVFSMAEVRIGSVPLVEPAEEVRALLLRLCGAVLRGNS
AEMFGCEIAGEACGVLSAALTDPFPEAKRECCSLLLRLADVCPEGLRSRL
GKVLRPLILNLGHQHSKTRQMTLQALGALLLCGSDDLDKPLRELILPQLR
NLLYDRTVAVRRELVAVLASLVAAGFLPPHDDDGGGGRNGNDAGGGHLAD
SAVAPMDTADDGDNSGGNDSNTTTTTGGGISDAAEAGAEEERRRACATTK
KKYLEPHRAELLSLLMKLLADESEPVRGEADRTLEGLGEAWAESSDNPSA
STSEQQQQQNCSPPVPPLPTGLGITPARKTPPARPAVAAVRALCVSLLPS
IMPAAIDEASHWTVRGRRRALWLLCFLVRYAGEEVTPYLPQLLASLGEAS
RCVCV*
back to top

mRNA from alignment at Ecto-sp13_S_contig778:11929..21365+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig778.19028.1 ID=mRNA_Ecto-sp13_S_contig778.19028.1|Name=mRNA_Ecto-sp13_S_contig778.19028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig778:11929..21365+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGTGTGCAGCAGCAGACACCTCTGCACAGTAGGCCGAGGAGGCGAGGTAG
GAGTCCTCTGGCTGGTTGGCGGTGCTATACCGTGTGAAGCTATTCTCTCT
GCGGTCTGGCGAGCACCTGAGGTACGAACGATCCCCCCACACCTCCACCT
CTCGGTGTTTTCCACAGCAGCACTTGTAACAACTCTGCAAGACAGAAAAG
AGACACCGTCTTTATCGAGATCCTTGTCCAGAAATGATCGATCCGCGTGT
TGTCCTTTTGCAGCCGTAACTATGCATGCTGTTTACGCCTCTCTCGCTAC
TTGAGGTTTAGCGTTTTTTTTCCCCGAATGACTCGTACGTCTTTCGACTG
CTCTGAGTCCCACTATTTCTTCTTTGCTGGGCTGCTTGTAGACTGCATTT
ATGAAACTGCTGCTGTGCATCGCTGTACATCTCACGGTACTGTATCCAGT
AGATTCGTGCCGCACCTCCGGAGGCCGCCTGAAAGTCTCGTGTATACGGC
ACCTATCACGACGTTTTGAAGAACTGCAAATATGTTGTGGTGACACTACT
ACTATTGTATGGCATGATGATGTTTACTGCATCTCTATTACGTCCGCATT
TATTGTCTCGGATGTGGTACACAGTAGTAACCCAGCAACCGTTTCACCCG
TCCAGGACATCAACACGTAAAGCACACAGGGTGCTCGTCCCAAGTCTCAA
GTGCTGGTGCCTGTGTCGCCCCTCACCCGCAATTTACATCGCTGCGTTCG
AGAAGTGTGCGTGTTGGTGCGTGCCGAAGCTCTGGATGTACACAGCACGT
CACTTCACTATTGGACAGTAATATTGACTCAATTACGACCAACATGACGT
TGCAGTTCACATAGATAGCCCGCCAACCTGTGCATAATGCACGGCAGTTC
GCCGTCTACTCCCTCTACAAATTAGTATTGGAGGGCGCGTTAGTCGTGAG
TACACACAGCAACGGGGCCGAGGGGCCGTTGGACTCTTCTCGCGTTAAAC
CATTGAAGACGAGCATCGTAAGAACTTTGCTCCTGCGTGCGCGTGACCCC
AGCTACTGCTGAAGTATGAGTACATCTGCTGTACGTGAAGCAAAAAAAAA
CACCAAAAGGTAGAGAATGGCGCCCAGAATTAATGGTACATAAACACGCA
CGCACACCCCTCTACTAGAAAAAGCGTGTTTACGTTTGTCTTTCCCGCTT
TGAAGACCGACGTATTGGACTTGGTCAACGGTTGCTTCTAGTAGCAAGGA
CACGATACACAACCTGGAGGGAAGCACCAGCCATCACCAGGTACACACAC
ACGCTCAAGCTAACCCTCCAACTTGACGCGGCAGGGACGATCCCGACGAC
CAACAACGACACAAAAGCCGAGCTCGCGCGGCCGATGTCCGCGGCGCCGA
TGGACGGGCTCTCCCTGTCCGACGAGGCTAGCCTGTCACACCTGCGGCAG
CGGCTGCAGCGGGACCTGAACTGCCTCTCCGACCCTGACCGGTCGACTCG
GAAGCGTGCCTTGACCAAGCTCCAAAAGGCGCTTTTCCGCGAGGCGAAGG
TAAAAAGACCGTTGGAACAAGACCGTTGGACAACTTTCTACGCACACCAG
TGTTTGCACACCAAGAGCTAATGCGCTCGTATGCATACGGTGGTCAGAAT
CTTCTTGCTGCTGTCGATCGTCTCCACAGCGGCAACGTACCACGTCTACG
ACAGTTGTGAATGATGCCCCTGTGTCTGGAGATGCCGAAAGCGTTTTCCG
GCTGCCGCTGTTCATGTTTCCACGTGACTCGTTTACTTGCTTTTAGTAGC
ACAAAGAGGCGGTGATCGATGTCTCGGGCCATCATCCAGAACATGCAAGA
ACAACACCATGTACCTCAACCGACGAGCCCTTTACACAACATCGATTTCT
CCCCCACTACCCCCCCTTAGCCCCTGTATGGCGCCCTGAGAACTCCCGCT
TCGGGAGGTAAGCTACCAGGAAAAAAAAATGTAGGTGATTTGCTTCTTCT
TCTCGCCAGCGGTGTATTCGCCGGTCAGTCAGACGGCCTCAAGGCGAAGC
AAGTAATCCACAAACACCCAAGCTGTACAATCCCAACCACGCATCCCCCC
ACCCCCTACCCCCCCCCATTAACGAAACGGCTGCAGGTGCCGGAGGCGGT
GCTACGGGGGTTTCTCTCCCGACACCTCTCCGAGCGGCTGGTGGGGATGA
TGGCCGATCCCGTTGAGAAGTGCAGAGAGATGGCGGGAGGTGCGTCGGGA
AGGAGGCGGCGGAATAAGCGTGGCCGTGGTGGCGGGGGGGGGGTACTCGT
AGCCGTGCATGCCGTAGTCGTTAGACCACTTTGACCTCGCATCCCTATAA
AGCCGGGACGGAGCAAGCCCGGGGCTGTGGGGGGGGAGGGAGGGGTACTC
ATCAGTCGTGCACGCCGTAGTCGTTAGACGATTGACCTCGTGTTCATGTT
TTGCTTTCCTTAGTTGTTAGACCATTGACTCGAGGATAGAGCCAGTGGGG
GGGGGACGAGGGTAGAGACGGGGGTATAGACGGGGGATAGGGAGCGGGAT
TGGGAAAGGGAGGTTGGGCGGCGATGAACAAGAGTCGTTCGTCGAACCAG
GTTTGATGGCCCAAAAGCCGACGGCTGTGGTGACGATGGTCGATGTACCG
GTTCAAAGCAGGTGGCGGAAAGGGAGATGCTTGATCGTACGATATCTTAG
GGGAAGGGATGTGGACATGGCCGCGATGTGCTGATTTCTGGTGCTGTTGG
TGGCGTGTTTCCTCAGGTCTGTTGCTAGAGTTTGTGGATGCCGTGGGCGG
CGATGCACTGCCGGAGATGACGGCTTTGGCTAAGCAGGTGCGCCTCGCCT
CCCCCCGCAGGGATTCACGTCCTTTTGTGTCTCGTGCCTCTGTGGTCGTT
GTTGCTGTCGCTGTTTTCTGCTGCTATCTGTCTAGTGTTGGTGTTGGTGT
TGTCATCGTTGGATTCGCTCGCCGTTGTTGTTGTTGCTGTTGCTGTTGCT
GCTGCTGCTGCTAGCTTTGCTGCTGCTGCTGCTAGCTTCGCTGCTGCTTC
TGCTGGTACGGTGGCGGATAGGTGCTCTATTACTCTTGTTACTCCTCACG
CTGATAAATTTGTTGTGCGTTAGTGCGTTGCTTGCGGTCAACCTTGTGGG
GCTGAGAGCTCCGGGCTTTGCGAGCGACCTTTTGGTCCGGCCTCATATGC
CAGGACGGACACTTGATAGTGAAGCTGCTCCAAGGCATGCATTTTTTCTT
TCCTTGCCTTCCTCCTAGGAAGTAACAATACTGGCGTGGCGCACGCTGCT
GCTGCGCACCGTCCCGTTGCCCTTTTTGTCTTGTATTTTCCTTTTTTTTT
TCGTTTGCTCTGCTCCGTCCCGTTTTCTTTTCGTTTCTCTGACGATGGCG
GTGCTGACGGTGCTGGTGGTGCTGGTGCTTCTGCTGGTGCTGCCGGTGCA
GGTGTTCTCCATGGCTGAAGTGCGGATAGGGAGCGTCCCGCTGGTCGAGC
CCGCGGAGGAAGTGAGGGCTCTCCTGCTCAGACTGTGCGGCGCGGTGCTG
AGAGGGAATAGCGCCGAAATGTTCGGTTGTGAGGTGGGGTCGGTCTGTGT
GTTTTAACCGAGGTTTCTGCGAAGCGTCTACATATGCTATGTACAATTTT
CGTCGACACGATCTGCGTCCTAGCGAAACCATACGCGCAACGCTGTGTTG
AAGCGCAGTTTTTTGCTTTGGCGTGCTCTTTCATGTTTCCCAGAAAATGG
AAAGCCGCTCAGCAGTCGTTAGGACGCGGCTGGCGTCCGATCGGAGGGGA
CTGATTCGCTGACTGCTGTCCTTTCCCCCCCCTCCCTGTCTACGAAGTTG
GCAGGCTCCCTCAACCGCAACCTTAGGTTGTGGTGGGGGTGTTGGGTTTG
TGGCCTTGTTGAATCCTTCTTCGATAAAACGCACTTCTATTCCGCAGTCG
ACAGTCTTTTGTATTCCCTTTTTCTGCCGTAACGATTGCCTCGCTCAAAC
GCAACGCTTTCTCCCCCCCCCCCCTATCTCTTCCCCTGCTCCTCCTTTCG
GCGTGCGGCTTGGTCCTCCGCTGGGCATGATATTTGTGTCTCACCGTCCA
CGCCACGGCGCGCGCGCGGGGTCAACACGTGAATGCTCGGGCGGCGGGGG
GTGGGGATGGGGGGCCCGCAGATTGCCGGGGAGGCGTGTGGGGTGCTCTC
GGCGGCTCTGACGGACCCATTTCCCGAGGCGAAGCGGGAGTGCTGCTCTC
TGTTGTTGCGGCTGGCCGATGTGTGCCCGGAAGGGCTCCGGTCTCGCCTA
GGCAAGGTGTGGATTGATTGGTGTGAGTGTCTTGTGCATATCCCTTGGGA
AGGTTTGGAATTCGACTAAATATACGGACGTGTGCGCCGTGAATTTTGAA
GCAATGTTAGTCCGCGCCTGTCTCGTGCTTTTGCTTTTTCTTTCGAACGA
AGTTTTTTCGACACCCGGTGTTTTCCAACCTCTGTAGGGTAATACTTTCC
GTGTTATACGTTCAGTGCTGCGCCTGTGCCTCGCTTGCCTGCGTCGTGCA
CGATCGACCTCTTTGCCTATCTCCTTCGCCACAGGGTGACACATTTCGCT
CACAGCAATCCTTTCATTGCTGTCGTTCTTGTGTCAGCACCAACATAGGT
CGTGAGATGAAGCCATAGTAAAACGTGGTCCGCATTTTTTTCATTTTTGG
TTGAAGAAGACCGCACAACAGTCACTCTGTGCATGGACACAATGAGAGAG
ATGGATAGAACGGCAACGGGGGGAGGGGGCAGACGTGTGTTATCGACGTG
ATGATTCTCTGTCTTGTATTGGTGTCATTTTTTCTGCCTTGCTTGTTGTC
CTCTGATGGCCCACCCCCTGCCCCGGCGGGCGGCGGTTGCACAGGTTCTG
CGCCCGCTGATCTTGAACCTAGGGCATCAGCATTCCAAGACAAGACAGAT
GACTCTTCAGGTGCGCGCGAAGGTGTCTTGACGGGTCTTTTGTCCTGCTT
TCTATTGAGCCGGATCAAGCGAGACACCTACAAAAACAGAGCGCCAAGTG
GAAATTGGAGAAGGATGTGGGGCAGGGGAGGGGCTGGTGGCACTACCATT
CTCGGGCTCTAGCCTTAATGATGTTGTGTTGTTGTTGCCTCCACATTCAT
GTCCGTTTCGATCTCTGGTCAAGTACCTTCCAACGTTTGACCTGGCCCAA
CTGACGCGGACTCCTTCCGTGATCACAGGCTTCATCTACCCAAATTGGAT
GCCAACTGTACGAAAAAGCAAAGACGAATTGAAGGACCCAGGAACACAAC
ACAATAGTACACACGCGGTATCTATAACGAACGAGAAACGAGAAAGCAAT
CCCCGGCACAGCAGTCAGCCTTCGCAGTAGGCGACATGCGGAACAAAGGA
GAGCATTATTGAAACGGGGACACGATGTACAGATCCCTTCGCTCCCACTC
GACACGCGAGGCCAAGCAAAAAATAAAGTAACGCAACGAGACTCATAAAG
GTTACCAATTCAGACCCTAAAACTCGCATGATTCTACCCTTGTCCACCCT
CCTCGACCGGGGTGCAACAACCCCCCGCGTTTTGCACCAGCCACGCCATT
TCTATGCAACCCCCCACATAATTGTGTCTACAAGAGATCAATCAAGATCA
TGCACCGTGACAGCGGTAGACCTCATGCAAAGAACGCAAAGTATCAAGAC
ACTGCTGTGTTCCCCACATGATTATGTACTGACCGTGCGGGAGAATGCCA
TCCATGCCAGGTTCTCGACGGTCAGACTCTCATCATCCGCACAAAAAAAA
AGAAGAAAAAAAATCGGGAATGCGCTACATCGAGGAGAGGGTGCAGCAGT
GGAAGGAAGGCGATTAGGAAAAAACTAACAATAATGGAGATTACCGTTTC
CTGGCACCTCCGTCACATTCAGCCCGGCGCGAATCTTGCTACACGTTTTG
CTGTACAGCTGTATCTTTCTGAAGGCTACTTGTAGCTAAATTGGACGGTT
TTGTGTGTCGCTCCCGACGTCCAGTAGTACGTTCCTGAAAAAAAAAAAGA
TTAGGGGGGTGGGGGGGGGGGGTTGGACCTCCGGAGTGTTGGCGGCGTGG
GCGACGACGTAAGAGCANNNNNNNNNNTGAGTAATATGTGTGGTGTGAAG
GAAATGTAAAAATAAAAAAAAAAAAAAAAAAAAAAGATTAGGGGGGTTTG
GGGGGGGATTTGAACTCCACAAGTAATGTCAAGGTTTAAGAGGAAAGGGG
GGACTGTCAGGGCATCATGCCAGGGGTTGCTACATTGTGTGCGTGCGCCC
ACGAAGCCCCTATGCAACAGGACGGAAAAAAGTGGAGGATGGGGGATTTG
AACCCCCGACATTTCGCATGCAAAGCGAACACTCTAACCCCTGAGCTAAA
CCCCCGCTTATGCCCCATTGCATGATATGATGCGTGGATACAGAGTATTT
ATATGATCGATGTTGCACCACATTGAAAGCTGTTAGTACTGTTGCTGTTG
CTGCTGTTGCTGCTGCTACCGCCGCTGAGATGACTATTCGTGTCTGGAAA
CGGTTAATACGCACTACACGCTCAATGGTGGGAGGTGGTTTTTGCGTAAT
GAACGGCCAACTTTTTTTCTTTTTTTGTGTACAGTGCAATCTAATAAATA
ATCACTTCGAAGCACTTACTCGACTGCAGCCAGCCCTCAAATCAACAAAC
ACGTCCCTAAATGCACGTGTATGTGTGCCTGGGAAGATGTACGAAACGGA
GAATTGAAGAAATAAGGCAAAAAACGATGTAACATATGTATGCCTACAGT
ATGGGCGTACGGCAACTCATGAACGTGAATTTTGTGTTTTGGTAAATAAT
CGTTTAGACTCACTTCCACCCACGACTTTGCCTTTCAAGAAATAGTCTCC
TCTGTGTGCAGGTGATACAGCGTTCAAGACGCCCCCCCCCCTCCGAGCCC
CCAAATAGAGCGGTACGAAGTGTTTTGGTGCCAGACCGCGTATCGCTGAG
AAGCTAGATGAGATTCTCAAAGGTAACAAGAAAAAGGGAGAGGGAACGGG
CAGGCAGGCAGGCAGAGACACACTCGCGTGTTCCCTGTTCTCGACACGCT
GCTTGGTGTGACAACAACCCCTATTAATAACGAAAACGGGTTCATGTTGG
GACAGGAAGCGCCGCAGTTATATACACATATACATATATATATGTATGTA
TTTTTTTCGCGTGTTTTGGAGTGTGTTTTCGTTTTTGCCCTGTCTCCCCT
CTTTTCTATTTACAAAAATAGACACAACGCTCGTGTGAATGTACCGATCA
GCTGTCACGAAAGATGCGCCCTCATTTTTTCATATCGCTGTTACAGCAGT
GACAGGCACCTGTTTTGCATCGCTTCGCGCCCTAGCTGGTTTGATGCTTG
AGTCGACGAAGAGATCTGTCTCATCGCTCTCTTGCTTCGTTCTCTTTGGA
GCCTTTCCTCTCTCCCCCCCTGAACTTGAGCACAACGAATCCTCTCGTCT
TCTCGTCTCAACTTGATCGCATTGAATTCTCTCCTGTGCTCGCCACTTTG
GGGCCTCTCCTCTCTCCCTCCCTCAAACCCGACAGCTATTAGTTATCTTG
TCTTTTTTTTTTCGGCGAGACAGGCCCTAGGAGCGCTGCTGCTGTGTGGC
TCCGACGACCTGGACAAGCCCCTGAGGGAGCTTATCCTACCGCAGCTGAG
GAATCTGGTGAGGAGAAGACAGGTTGGGGCGGCGAGCGTAGGGGCCTACA
TGATGTTTTTTTGGTTCAGGCCGTTAGTTGTGTTTTTCGTTTTCCGAAAG
TATGTTGTGTGTGTGTGTTTTTTGTCGACCGCGCTAACGGGCTGACCTCT
GAACAAACGCCAGTCTTCACGCGGGTTGGGTGCGTGTTATTTTTTTACAT
ATTTCTAGATATATATTTTGCACCTACTACTGTAGACTATACCTTCACTG
CAGACTGCATGTAGACGAGGTAACCTTGCGAAGTCGAGGACCTGGTGTTA
ACGTTGTTTTCATTGACATGACGATGTGTAATGTTCATCTTTTTGTTCTT
TAACTTGATTTCATTCGTGTTCCCTTGATGAAATGTGGCATTCACTGCTG
TTTTGATACACATGTGTGTTGTCTTTTGATACACGTGTGCGTGTTGTCTT
TTGACCGCTATTCCTGTTGTGTGGGTTGTGCTCATCATTGCTCGGCACTT
TTCTACCAGCACCTCGCTCTCTCGTGTCCACCTGCAAAAAGTCCCGCCCC
CCCCCCGTCCCCCTCCGCGTCGCAAACCTGTCTCTCTCTCTCTGTGTGTT
GCACGCAAACAAACCTTACCGTACACGGCAAAACGGCACAGCTGTACGAC
CGCACGGTTGCGGTGCGACGCGAGCTCGTGGCCGTCCTCGCCAGCCTCGT
CGCGGCCGGCTTCCTTCCACCACACGACGACGACGGCGGCGGCGGTCGTA
ACGGCAACGACGCCGGCGGGGGCCATCTCGCCGACTCCGCCGTCGCGCCG
ATGGACACGGCGGACGATGGGGATAATAGCGGCGGCAACGACAGCAACAC
CACCACCACCACCGGCGGCGGTATCTCTGACGCGGCGGAGGCGGGGGCGG
AGGAGGAGCGACGGCGGGCGTGTGCGACGACGAAGAAGAAGTACCTCGAG
CCCCACCGGGCCGAGCTGCTGTCGCTGCTGATGAAGCTGCTGGCGGACGA
GTCGGAGCCGGTCCGGGGGGAGGCGGACAGGACTCTCGAGGGGCTCGGGG
AGGTGAGAGTGGAGCGAGCGAGCGAGTGAGCGGGGCGGCGGGAGCTGCTG
TGGTGTAGAAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TGGTGATGGTGGTGGTGGTGGTTGTGTTGTTGTGGTTGGTGTTGGTGTTG
GTGGTGGTGTGAATGCTGTCGTGGTGTGGGTACTTGTATTGTTTTGTGGC
AGTTTCGCCTGCCGATACTGCTGTTGCCAGTATTCCAGTCTTTTCGTGAA
CGTCGCTCGTTGTTCCCTTAATCCCCCCCCAAATGCATTCGCCCATTTCC
CCCCGTCGCCAAATAAACCGCCGGCCGGACACACAGGCTTGGGCCGAATC
ATCCGACAATCCGTCGGCATCAACATCAGAACAACAACAACAACAAAACT
GCTCTCCGCCGGTGCCTCCTCTCCCAACCGGCCTCGGCATCACTCCCGCA
CGAAAAACGCCTCCAGCAAGACCTGCGGTGGCGGCGGTGCGCGCCCTCTG
CGTGTCTCTGCTCCCGTCCATAATGCCGGCGGCCATCGACGAAGCCAGCC
ACTGGACGGTCAGGGGACGCCGCCGCGCCTTGTGGCTGCTGTGCTTCCTC
GTACGGTATGCTGGGGAAGAGGTGACCCCGTACCTCCCCCAGCTCTTGGC
CTCCCTCGGAGAGGCCAGCAGGTGTGTGTGCGTTTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig778:11929..21365+

>mRNA_Ecto-sp13_S_contig778.19028.1 ID=mRNA_Ecto-sp13_S_contig778.19028.1|Name=mRNA_Ecto-sp13_S_contig778.19028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1518bp|location=Sequence derived from alignment at Ecto-sp13_S_contig778:11929..21365+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCCGCGGCGCCGATGGACGGGCTCTCCCTGTCCGACGAGGCTAGCCT
GTCACACCTGCGGCAGCGGCTGCAGCGGGACCTGAACTGCCTCTCCGACC
CTGACCGGTCGACTCGGAAGCGTGCCTTGACCAAGCTCCAAAAGGCGCTT
TTCCGCGAGGCGAAGGTGCCGGAGGCGGTGCTACGGGGGTTTCTCTCCCG
ACACCTCTCCGAGCGGCTGGTGGGGATGATGGCCGATCCCGTTGAGAAGT
GCAGAGAGATGGCGGGAGGTCTGTTGCTAGAGTTTGTGGATGCCGTGGGC
GGCGATGCACTGCCGGAGATGACGGCTTTGGCTAAGCAGGTGTTCTCCAT
GGCTGAAGTGCGGATAGGGAGCGTCCCGCTGGTCGAGCCCGCGGAGGAAG
TGAGGGCTCTCCTGCTCAGACTGTGCGGCGCGGTGCTGAGAGGGAATAGC
GCCGAAATGTTCGGTTGTGAGATTGCCGGGGAGGCGTGTGGGGTGCTCTC
GGCGGCTCTGACGGACCCATTTCCCGAGGCGAAGCGGGAGTGCTGCTCTC
TGTTGTTGCGGCTGGCCGATGTGTGCCCGGAAGGGCTCCGGTCTCGCCTA
GGCAAGGTTCTGCGCCCGCTGATCTTGAACCTAGGGCATCAGCATTCCAA
GACAAGACAGATGACTCTTCAGGCCCTAGGAGCGCTGCTGCTGTGTGGCT
CCGACGACCTGGACAAGCCCCTGAGGGAGCTTATCCTACCGCAGCTGAGG
AATCTGCTGTACGACCGCACGGTTGCGGTGCGACGCGAGCTCGTGGCCGT
CCTCGCCAGCCTCGTCGCGGCCGGCTTCCTTCCACCACACGACGACGACG
GCGGCGGCGGTCGTAACGGCAACGACGCCGGCGGGGGCCATCTCGCCGAC
TCCGCCGTCGCGCCGATGGACACGGCGGACGATGGGGATAATAGCGGCGG
CAACGACAGCAACACCACCACCACCACCGGCGGCGGTATCTCTGACGCGG
CGGAGGCGGGGGCGGAGGAGGAGCGACGGCGGGCGTGTGCGACGACGAAG
AAGAAGTACCTCGAGCCCCACCGGGCCGAGCTGCTGTCGCTGCTGATGAA
GCTGCTGGCGGACGAGTCGGAGCCGGTCCGGGGGGAGGCGGACAGGACTC
TCGAGGGGCTCGGGGAGGCTTGGGCCGAATCATCCGACAATCCGTCGGCA
TCAACATCAGAACAACAACAACAACAAAACTGCTCTCCGCCGGTGCCTCC
TCTCCCAACCGGCCTCGGCATCACTCCCGCACGAAAAACGCCTCCAGCAA
GACCTGCGGTGGCGGCGGTGCGCGCCCTCTGCGTGTCTCTGCTCCCGTCC
ATAATGCCGGCGGCCATCGACGAAGCCAGCCACTGGACGGTCAGGGGACG
CCGCCGCGCCTTGTGGCTGCTGTGCTTCCTCGTACGGTATGCTGGGGAAG
AGGTGACCCCGTACCTCCCCCAGCTCTTGGCCTCCCTCGGAGAGGCCAGC
AGGTGTGTGTGCGTTTGA
back to top