prot_Ecto-sp13_S_contig778.19027.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig778.19027.1
Unique Name	prot_Ecto-sp13_S_contig778.19027.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	565

Homology

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BLAST of mRNA_Ecto-sp13_S_contig778.19027.1 vs. uniprot
Match: D7FI56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI56_ECTSI)

HSP 1 Score: 762 bits (1968), Expect = 3.350e-272
Identity = 514/568 (90.49%), Postives = 523/568 (92.08%), Query Frame = 0

Query:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTTYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTTATTTGAAGGRR-EFISAPIAAASFCQTAAAVTKSSTRFEPSSPAAFSCRACGNLLRDCVECPTCHSLFCRDHLAVDKQNGTSPCPCEPCSPAPIATTLSAASTSSPAAARV--HHPCEAFLPNIPVQRMADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAASLRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTMPFAAILNRAGFSPQTATPAAAAAE-PVRLPLAVPDKKKSGAGSRAAATATTQTVVPGTASRASGRGTAKGTLSAAVKTARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYLDRPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLLG 564
            MSGMLESSSDDGCMSDHSFDFVEVEGGT+YSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVT             EFIS PIAAASFCQTAAAVTKSSTRFEPSS AAFSCRACGNLLRDCVECPTCHSLFCR+HL VDKQNGTSPCPCEPCS APIATTLSAAST          HHP EAFLPNIP+QR+ADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAA+LRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      MPFAAILNRAGFSPQTAT        PVRLPLAVPD+KKSGAGSRAAA ATTQTVVP TASRASGRGTAKGTLSAAV+ ARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYL+RPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGL+G
Sbjct:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTXXXXXXXXXXXXXEFISTPIAAASFCQTAAAVTKSSTRFEPSSLAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCSLAPIATTLSAASTXXXXXXXRAHHHPREAFLPNIPLQRIADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRAAXXXXXXXXXXXXXXXXXXXXXLAAAERCLQERDQEAAALRGKITTMTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----NAMPFAAILNRAGFSPQTATTXXXXXXAPVRLPLAVPDRKKSGAGSRAAAIATTQTVVPSTASRASGRGTAKGTLSAAVQMARAGGSPPRASAGVMMDTASQAPVPAVEACLKPYLERPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDVRDHVLAHRSWGLIG 564

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig778.19027.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig778.19027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FI56_ECTSI	3.350e-272	90.49	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 255..310
None	No IPR available	COILS	Coil	Coil	coord: 326..346

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig778	contig	Ecto-sp13_S_contig778:7496..11671 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig778.19027.1	mRNA_Ecto-sp13_S_contig778.19027.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig778 5098..11671 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig778.19027.1 ID=prot_Ecto-sp13_S_contig778.19027.1|Name=mRNA_Ecto-sp13_S_contig778.19027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=565bp
MSGMLESSSDDGCMSDHSFDFVEVEGGTTYSSDGDATVTSSLAPPKGWST
LSLSDAEAVKTGPAAVTTATTTGAAGGRREFISAPIAAASFCQTAAAVTK
SSTRFEPSSPAAFSCRACGNLLRDCVECPTCHSLFCRDHLAVDKQNGTSP
CPCEPCSPAPIATTLSAASTSSPAAARVHHPCEAFLPNIPVQRMADAVPS
RCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASST
CPGRLALAQAEALEARSEAARLRAAGEEAERRASSAEMRASELEARLAAA
ERCLQERDQEAASLRGKITTMTAAAAVTAEENGKKQERLMQQLKQQAAAA
AVAQDARRAGKQQQQQQQQQQVAATRTSQPPQQHQQQQPPTTMPFAAILN
RAGFSPQTATPAAAAAEPVRLPLAVPDKKKSGAGSRAAATATTQTVVPGT
ASRASGRGTAKGTLSAAVKTARAGGSPPRASAGVMMDTASQAPVPAVEAC
LKPYLDRPSSLLEKKVVVFWPRQGRWYTGRPTVYKEATREHRVEYDDGDV
RDHVLAHRSWGLLG*