prot_Ecto-sp13_S_contig7771.19020.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7771.19020.1
Unique Nameprot_Ecto-sp13_S_contig7771.19020.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7771.19020.1 vs. uniprot
Match: D7FH43_ECTSI (Exocyst complex component, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH43_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 5.290e-124
Identity = 226/234 (96.58%), Postives = 228/234 (97.44%), Query Frame = 0 
Query:    1 MSSGRKDKRWLKSVADPDLVSFFEDSEFDAGEYAKGFFEQREASHAAHRVEKLEGLKRQTESALRAEVVRNYQAFMHATEEIRSMEAGLQTLKDLLGSTAVTLQTFRGVHLVETVKPAEKTPTARSNXXXXXXXXXXXXXXXXXXXX-PSTSRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISAANTLTV 233
            MSSGRKDKRWLKSVADPDLVSFFEDS+FDAGEYAKGFFEQREASHAAHRVEKLEGLKRQTESALRAEVVRNYQAFMHATEEIRSMEAGLQTLKDLLGSTAVTLQ+FRGVHLVETVKPAEKTP ARSN    XXXXXXXXXXXXXXXX PSTSRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISAANTLTV
Sbjct:    1 MSSGRKDKRWLKSVADPDLVSFFEDSQFDAGEYAKGFFEQREASHAAHRVEKLEGLKRQTESALRAEVVRNYQAFMHATEEIRSMEAGLQTLKDLLGSTAVTLQSFRGVHLVETVKPAEKTPAARSNSRAVXXXXXXXXXXXXXXXXXPSTSRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISAANTLTV 234
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BLAST of mRNA_Ecto-sp13_S_contig7771.19020.1 vs. uniprot
Match: A0A835ZCG0_9STRA (Exo84_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCG0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.080e-53
Identity = 112/215 (52.09%), Postives = 140/215 (65.12%), Query Frame = 0 
Query:   18 DLVSFFEDSEFDAGEYAKGFFEQREASHAAHRVEKLEGLKRQTESALRAEVVRNYQAFMHATEEIRSMEAGLQTLKDLLGSTAVTLQTFRGVHLVETVKPAEKTPTARSNXXXXXXXXXXXXXXXXXXXXPSTSRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISAANTLT 232
            DL+ FF D  FDAGEY K F+E   AS A+ R E+LE L+RQTE +LR EVVRNYQ FMHAT +I+SME  +  L++LL + A TL TF+ + LVE   PA K     +                 XXXX     GLKLPEWLD+AP ELEELLLERKH+ A  LIR+V+ F+AN++NATNLG GV  IF + + MAA ++ RL+ EI+  NT T
Sbjct:    2 DLIEFFGDENFDAGEYVKKFYENNSASGASARCEELESLRRQTEESLRQEVVRNYQTFMHATAQIQSMEKDIDALRNLLSTAATTLSTFQSIRLVERPDPASKLSPTNAEGGAFGLRAGATGRGGDXXXXXXRG-GLKLPEWLDKAPTELEELLLERKHEAAVRLIRQVKAFAANVRNATNLGAGVADIFAQADAMAAELSCRLITEITGTNTFT 215
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BLAST of mRNA_Ecto-sp13_S_contig7771.19020.1 vs. uniprot
Match: A0A7R9UG23_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG23_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.940e-5
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 0 
Query:  149 STSRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISAAN 229
            + +  L+LP WL+ AP ELEE +LER  + A  LI +VR+F A + + + +   +  +F+KV   A  +A RLL E+   N
Sbjct:   83 TANAALRLPRWLEVAPEELEEAILERHSKTAEALIVKVRNFEAQIHDPSAVHDRLREVFEKVRRGAHLLASRLLKEVKTGN 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7771.19020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH43_ECTSI5.290e-12496.58Exocyst complex component, putative n=1 Tax=Ectoca... [more]
A0A835ZCG0_9STRA6.080e-5352.09Exo84_C domain-containing protein n=1 Tax=Tribonem... [more]
A0A7R9UG23_9STRA1.940e-538.27Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF08700Vps51coord: 23..101
e-value: 3.3E-11
score: 43.1
IPR033961Exocyst complex component Exo84PANTHERPTHR21426FAMILY NOT NAMEDcoord: 23..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7771contigEcto-sp13_S_contig7771:315..5259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7771.19020.1mRNA_Ecto-sp13_S_contig7771.19020.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7771 315..5259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7771.19020.1 ID=prot_Ecto-sp13_S_contig7771.19020.1|Name=mRNA_Ecto-sp13_S_contig7771.19020.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MSSGRKDKRWLKSVADPDLVSFFEDSEFDAGEYAKGFFEQREASHAAHRV
EKLEGLKRQTESALRAEVVRNYQAFMHATEEIRSMEAGLQTLKDLLGSTA
VTLQTFRGVHLVETVKPAEKTPTARSNSRSVAAAAASPEEGEGNGDGPST
SRGLKLPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLG
RGVERIFQKVETMAAGMAERLLAEISAANTLTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033961Exo84