prot_Ecto-sp13_S_contig7767.19013.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7767.19013.1
Unique Nameprot_Ecto-sp13_S_contig7767.19013.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7G445_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G445_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 4.030e-120
Identity = 159/179 (88.83%), Postives = 168/179 (93.85%), Query Frame = 0
Query:    1 MKVPASSTLLGLAMVAAFPIKTVTGTHLDDYVLVGCYGDSQSVRIMFNKQSEDIMSASICYDLCNDGTNTHFGTQYGEECWCGIHPALATHGELDIDSCDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGNPLVFDAMTNKLCVDHCASFGYAWAATEYGQE 179
            MK+PASSTLLGLAMVAAFPIKT+TG HLDD+VLVGCY DS+S+RIMF+KQS+ IMSA ICYDLCNDGTNTHFGTQ+G ECWCGIHPALATHGELDIDSCD  C GT  ENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDA PRAMPG+PLVFDAMTNKLCVDHCASFGYAWAATEYGQE
Sbjct:    1 MKLPASSTLLGLAMVAAFPIKTITGDHLDDFVLVGCYADSRSLRIMFDKQSKPIMSADICYDLCNDGTNTHFGTQFGRECWCGIHPALATHGELDIDSCDMACKGTGGENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDARPRAMPGDPLVFDAMTNKLCVDHCASFGYAWAATEYGQE 179          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: A0A6H5JN62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN62_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 2.200e-106
Identity = 145/178 (81.46%), Postives = 149/178 (83.71%), Query Frame = 0
Query:   23 VTGTHLDDYVLVGCYGDSQSVRIMFNKQSEDIMSAS---------------------ICYDLCNDGTNTHFGTQYGEECWCGIHPALATHGELDIDSCDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGNPLVFDAMTNKLCVDHCASFGYAWAATEYGQE 179
            + G HLDDYVLVGCY DSQS RIMFNKQSED+MSAS                     IC+DLCNDGTNTHFGTQYGEECWCGIHPALA HGELDIDSCDFPCAG EEE CGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPG+PLVFDAMTNKLCVDHCAS GYAWAATEYGQE
Sbjct:   14 ILGNHLDDYVLVGCYADSQSGRIMFNKQSEDVMSASVSCTVLLLRTLAFWIGAWRAQICFDLCNDGTNTHFGTQYGEECWCGIHPALARHGELDIDSCDFPCAGNEEETCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGDPLVFDAMTNKLCVDHCASLGYAWAATEYGQE 191          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: A0A6H5KUX7_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX7_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 7.980e-90
Identity = 125/158 (79.11%), Postives = 130/158 (82.28%), Query Frame = 0
Query:   23 VTGTHLDDYVLVGCYGDSQSVRIMFNKQSEDIMSAS---------------------ICYDLCNDGTNTHFGTQYGEECWCGIHPALATHGELDIDSCDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGNPLVFDAMTNKL 159
            + G HLDDYVLVGCY DSQS RIMFNKQSED+MSAS                     IC+DLCNDGTNTHFGTQYGEECWCGIHPALA HGELDIDSCDFPCAG EEE CGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPG+PLVFDAMTNK+
Sbjct:   14 ILGNHLDDYVLVGCYADSQSGRIMFNKQSEDVMSASVSCTVLLLRTLAFWIGAWRAQICFDLCNDGTNTHFGTQYGEECWCGIHPALARHGELDIDSCDFPCAGNEEETCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGDPLVFDAMTNKM 171          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.430e-26
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   30 DYVLVGCYGDSQSVRIMFNKQSEDIMSASICYDLCNDGTNTHFGTQYGEECWCGIHPALATHGE-LDIDSCDFPCAGTEE-ENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMP-GNPLV 151
            D+  VGCY DS   RI+ ++   + MSA +CY  C+DG NTHFG QY  ECWCGIHP L  +GE L    CDF CAGT   E CGGF KM+V++I A        Y+GC  +AL + +  G+P +
Sbjct:   39 DFSFVGCYADSVGKRILNSRGQHNPMSAEMCYMFCDDGVNTHFGMQYSGECWCGIHPELNQNGEELAAGECDFLCAGTTTGEICGGFLKMSVFEITA--------YKGCQYEALDQPIGRGSPPI 155          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7FL81_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.990e-24
Identity = 63/153 (41.18%), Postives = 77/153 (50.33%), Query Frame = 0
Query:   30 DYVLVGCYGDSQSVRIM-FNKQSEDIMSASICYDLCN--DGTNTHFGTQYGEECWCGIHPALATHGELDIDS-CDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGT-------------------DYE--GCFRD-ALPRAMPGNPLVFDAMT 156
            DY  VGC  DSQS R+M     +ED+MSA IC+ +C+  D +NTHFGTQYGEECWC       + G  +  S C   CAG   E CGGFD +++Y+I A      T                   DYE  GC  D    R MP  PL  D M+
Sbjct:   51 DYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWC-----TGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMS 198          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.370e-22
Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 0
Query:   30 DYVLVGCYGDSQSVRIMFNKQ--------SEDIMSASICYDLCNDGTNTHFGTQYGEECWCGIHPALATHG-ELDIDSCDFPCAGTE-EENCGGFDKMTVYDIQAVNGGTGTDYE 134
            DY   GC+ DS   RIM N +         +  MSA  CY +C+DG NTHFG +Y  ECWC + P L  HG ELD   CD  C GT  +E CGGF+KM+VY+I A  G    D+E
Sbjct:   31 DYSPRGCFADSTIDRIMPNIRLVHLQEMTQQGPMSAETCYFICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQGCHSEDFE 145          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.990e-20
Identity = 70/186 (37.63%), Postives = 90/186 (48.39%), Query Frame = 0
Query:   11 GLAMVAAFPIKTVTGTHLDDYVLVGCYGDSQSVRIMFNKQSEDI-MSASICYDLCNDGTNTHFGTQYGEECWC---GIHPALATHG-ELDIDS-CDFPCAGT--EEENCGGFDKMTVYDI-----QAVNGGTGTDYEGCFRDALPRAMPGNPLVFDA--MTNKLCVDHCASFG--YAWAATEYGQE 179
            G  M+ A+ I     +  D YV +GC  D    RIM  +    I MSA ICY +C DGTNTHFGTQ+G+EC+C        +  HG EL   S C   CAG    +E CGGFD+M+ Y+I       V  G  T   GCF D        + L  DA  M+  +C   C      Y +  T++G E
Sbjct:  441 GFDMITAYRIAGSEPSAGDGYVSIGCLADKNGDRIMDGRMVTSIPMSAEICYGICKDGTNTHFGTQWGKECFCMADADFENMEKHGGELSTASHCQMGCAGFTHRDEKCGGFDEMSAYEIIPEPEVPVIDGPYTAL-GCFEDPRDGDKAMDALFTDATTMSADICYSICMEEDPDYEFFGTQWGIE 625          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 9.270e-20
Identity = 61/175 (34.86%), Postives = 83/175 (47.43%), Query Frame = 0
Query:   33 LVGCYGDSQSVRIMFN-KQSEDIMSASICYDLCN--DGTNTHFGTQYGEECWCGIHPALATHGELDIDS-CDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGT---------------------DYEGCFRDALP-RAMPGNPLVFDAMTNKLCVDHCASF--GYAWAATEYGQE 179
            L+GC  DSQ  R+M     S   MSA IC  +C+  D + THFGTQYGEECWC       + G  +  + C +PCAG   E CGGFD +T+Y+I +    T                       D+  C  D+   R MP  PL    M+ ++C   C++    Y    T+YG+E
Sbjct:  353 LIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWC-----TGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPAPASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEE 522          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.430e-18
Identity = 56/157 (35.67%), Postives = 77/157 (49.04%), Query Frame = 0
Query:   30 DYVLVGCYGDSQSVRIMFNKQSE-DIMSASICYDLCND--GTNTHFGTQYGEECWCGIHPALATHGELDIDS-CDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGTDYE--GCFRDAL-PRAMPGNPLVFDAMTNKLCVDHCASFGYAWAATEYGQE 179
            DY L+GC  D +  R+M     E D MSA IC+D+C +   T+THFGTQYG EC+C         GE  + + C + C G  +E CGGFD++T Y I       G  Y   GC  D    R M    +    M+ ++C   C         T++G+E
Sbjct:  305 DYELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFC-----TDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRIAGSEPSAGDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEICYGICKDGTNTHFGTQWGKE 456          
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.450e-17
Identity = 55/154 (35.71%), Postives = 72/154 (46.75%), Query Frame = 0
Query:   34 VGCYGDSQSVRIMFN-KQSEDIMSASICYDLCN--DGTNTHFGTQYGEECWCGIHPALATHGELDIDS-CDFPCAGTEEENCGGFDKMTVYDIQAVNGGTGT---------------------DYEGCFRDALP-RAMPGNPLVFDAMTNKLCV 161
            +GC  DSQ  R+M     S D MSA IC  +C+  D + THFGTQYG ECWC       + G  +  + C   CAG   E CGGFD +T+Y+I +    T                       D+ GC  D+   R MP  PL  D M+ ++ V
Sbjct:  129 IGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWC-----TGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEVGV 277          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7767.19013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G445_ECTSI4.030e-12088.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN62_9PHAE2.200e-10681.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUX7_9PHAE7.980e-9079.11WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FK39_ECTSI1.430e-2648.00WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FL81_ECTSI2.990e-2441.18WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FTE6_ECTSI1.370e-2246.96WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FMV1_ECTSI4.990e-2037.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K566_9PHAE9.270e-2034.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ76_9PHAE1.430e-1835.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5F7_ECTSI2.450e-1735.71WSC domain containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 30..123
e-value: 5.8E-4
score: 25.6
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 34..113
e-value: 6.6E-13
score: 48.7
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 130..179
score: 6.12
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 30..123
score: 9.54
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 28..120
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 28..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.587

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7767contigEcto-sp13_S_contig7767:122..6860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7767.19013.1mRNA_Ecto-sp13_S_contig7767.19013.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7767 122..6860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7767.19013.1 ID=prot_Ecto-sp13_S_contig7767.19013.1|Name=mRNA_Ecto-sp13_S_contig7767.19013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=179bp
MKVPASSTLLGLAMVAAFPIKTVTGTHLDDYVLVGCYGDSQSVRIMFNKQ
SEDIMSASICYDLCNDGTNTHFGTQYGEECWCGIHPALATHGELDIDSCD
FPCAGTEEENCGGFDKMTVYDIQAVNGGTGTDYEGCFRDALPRAMPGNPL
VFDAMTNKLCVDHCASFGYAWAATEYGQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd