prot_Ecto-sp13_S_contig7763.19009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7763.19009.1
Unique Nameprot_Ecto-sp13_S_contig7763.19009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length426
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7763.19009.1 vs. uniprot
Match: A0A6H5JBK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK9_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 5.750e-70
Identity = 109/119 (91.60%), Postives = 114/119 (95.80%), Query Frame = 0 
Query:  308 MKALGLVAVSGMIGVSTGLEGACVDLSNACREGAPWLVKTGRWSGKIPLRLRQFWPLGGEDRRTLDISPSRLIQRRMVKALTILHNDHIGEDFAWPVGVEKVNFKYCNKDLGDVKWPST 426
            MKAL L+AVSGMIGVSTGLEG CVDLSNACREGAPWLVKTGRWS +IPLRLRQFWPLG EDRRTL ++PSRLIQRRMVKALTILHNDHIGEDFAWP+GVEKVNFKYCNKDLGDVKWPST
Sbjct:    1 MKALRLMAVSGMIGVSTGLEGTCVDLSNACREGAPWLVKTGRWSEEIPLRLRQFWPLGREDRRTLQLAPSRLIQRRMVKALTILHNDHIGEDFAWPIGVEKVNFKYCNKDLGDVKWPST 119
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BLAST of mRNA_Ecto-sp13_S_contig7763.19009.1 vs. uniprot
Match: D8LHY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHY5_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 8.240e-67
Identity = 109/119 (91.60%), Postives = 112/119 (94.12%), Query Frame = 0 
Query:  308 MKALGLVAVSGMIGVSTGLEGACVDLSNACREGAPWLVKTGRWSGKIPLRLRQFWPLGGEDRRTLDISPSRLIQRRMVKALTILHNDHIGEDFAWPVGVEKVNFKYCNKDLGDVKWPST 426
            MKALGLVAVSGMI VSTGLEG CVDLSNACREGAPWLVKTGRWS KIPLRLRQFWPLG EDRRTL ++PSRLIQRRMVKALTILHNDHIGEDFAWPVGVEKVNFKY  KDLGDVKWP+T
Sbjct:    1 MKALGLVAVSGMISVSTGLEGTCVDLSNACREGAPWLVKTGRWSDKIPLRLRQFWPLGREDRRTLQLAPSRLIQRRMVKALTILHNDHIGEDFAWPVGVEKVNFKY--KDLGDVKWPTT 117
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7763.19009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBK9_9PHAE5.750e-7091.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHY5_ECTSI8.240e-6791.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7763contigEcto-sp13_S_contig7763:5305..7286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7763.19009.1mRNA_Ecto-sp13_S_contig7763.19009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7763 5305..7286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7763.19009.1 ID=prot_Ecto-sp13_S_contig7763.19009.1|Name=mRNA_Ecto-sp13_S_contig7763.19009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
MDPTQHHQHQYGQQPAHGACWPPPPPQPAAGAPSRYVFSSGVHKQSLGNR
WQHQPQQQQQQHQQQQPQPQPQQQQYQHLDSHAPPRHFGNHHQQASWQIL
GHQPPRPYTAGGGSSGSRSYLEPSVLQRSTLHQHHHQQQVEASTQATVPN
AGQLLAGSPMSVDCRPHAHQAPVLAAANRGPAAWQQHGNARERGMGGGNR
VWISGGGGGLGPRSWHDWRMEGGAGGGHGGERATATPNPKLRQAQQSYKW
APKGGTNRSATKIIHHLPQQQQQQQTRKQGRRARQRHAKAWRPQPPPPCG
PPATAECMKALGLVAVSGMIGVSTGLEGACVDLSNACREGAPWLVKTGRW
SGKIPLRLRQFWPLGGEDRRTLDISPSRLIQRRMVKALTILHNDHIGEDF
AWPVGVEKVNFKYCNKDLGDVKWPST
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