prot_Ecto-sp13_S_contig776.18997.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig776.18997.1
Unique Nameprot_Ecto-sp13_S_contig776.18997.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length898
Homology
BLAST of mRNA_Ecto-sp13_S_contig776.18997.1 vs. uniprot
Match: A0A6H5KWA8_9PHAE (G_PROTEIN_RECEP_F2_4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWA8_9PHAE)

HSP 1 Score: 1514 bits (3921), Expect = 0.000e+0
Identity = 809/895 (90.39%), Postives = 830/895 (92.74%), Query Frame = 0
Query:    1 LRTYSFQLVVWLAVCDLAVNLSFFLGSPRYGSGLCYTQGVLQWFFQVALIQWTLLIAQSLLEVSSKTRAFDSNKRIPWNHLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGDSWNIGSLWRAIFLVVVLLSMIMIVWAYVEVLKTLGRAQRNVSRLSLEATTNRHTEASYVKQHREQRQSPKTYGGASSAPISAMPIHSNAIPGARLHVSPDQPKKDVSESTVVKESPTEPKNNSAARPRPPTSPNKRLERSNSFWKWMFLRSTEESAEGERRANGVSTLSSQQRDSAEHSSNSSGSSWPFTRSNSNVSVKNWLWSTSRDVGFYGDDEPLYDSSSEGEECKSVVWLNGMAAPANRRLSLGAVAGGPIPTSPERLPVLRETERGNDAGLPGVVSGEMRDAGGAIHDSNNSTRTAMIKWEQVLARPRAIAGKNCPSSGNASSESTEAAESHGVKTGSLAKAAMMVVPQVPMKSRFANGVVTARGFVSRMSSMDTDFGDVACGTARTRSRLTETEKGERASATSSTAVPLGAHGGRSQHVRTTHTPEMDMDRFISRIKWYPVIFVLCWMFTLINGIYTIAVGQANASFFLLLLATLTSRLQGLLNFICYGLNDKLKQAWLQDFLYRRAVASCCRALWCCCFRPCYGNDDSDDEADQARQPNSVVERPPASKGLNDVALVADEMEKGSAVEPASTPTPNPPSPVICETPAKAVVKKTSMAAFATPRHDLRQGQLALAPARPARPSRKVSSLVQSRSRRSHAAAAGRRKKSGSSTARHSVAAAGVRRQRDAVMRRARTSSHGGIAVTGNLRARKTLQQRDRARARRNEFIRQRPSGSGFGRIRLESTLASTPTATTVDLTRSLALPISVSMPVKVAPQESSAGQGGAGIVGRTPSPSR 895
            LRTYSFQLVVWLAVCDLAVNLSFFLGSP YGSG CYTQGVLQWFFQVALIQWTLLIAQSLLEVSSKTR FDSNKR+PWNHLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGDSWNIGSLWRAIFLVVVLLSM++IVWAYVEVLKTLGRAQRNVSRLSLEATTNRHTEAS VKQHREQRQ PK +GGAS APISAM I S+AIPGA LHVSPD PKKDVS+STV KESPTEP+N+S+ARPRPPTSPNKRLERSNS WK MFLRSTEESAEGERRANG+STL SQQRD AEHSSNSSGSSWPFTRSNSNVSVKNWLWSTSRDVGFYGDDEPLY+SSSEGEECKSVVWLNGMAAPANRRLSLGAVAGGPIPTSPERLPVLRETERG+DAGLPGVVS  MRDAGGAIHDSNNSTRTAMI WEQVLARPRAIAGK CPSSGNASSESTEAAESH V TGSLAKA MM VPQVPMKSRFANGVVT RGFVSRMSSMDTDFGD+ACGTARTRSRLTETEK ERASAT STAVPLGAHGGRSQHV TTHTPEMDMDRFISRIKWYPVIFVLCWMFTLINGIYT+AVGQANASFFLLLLATLTSRLQGLLNFICYGLNDKLK+AWLQDFLYRRAVASCCRALWCCCFRPCYGND  +DEADQARQPNSVVERP ASK LNDVALVADEMEKG+AVEPASTP PNP SPVICETPAKAVVKKTSMAAFATPRH+LRQGQLALAPARPARPSRKVSSLVQSRSRRS AA                    GVRRQRDAVMRRARTSS GGIAVTGNLRARKTLQQRDRARARR+E +RQRPSGS FGR RLE TLASTPTATTVDL RSLALPISVSMPV VAPQE+ AGQGGAGIV RTP PSR
Sbjct:   50 LRTYSFQLVVWLAVCDLAVNLSFFLGSPSYGSGFCYTQGVLQWFFQVALIQWTLLIAQSLLEVSSKTRTFDSNKRMPWNHLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGDSWNIGSLWRAIFLVVVLLSMVVIVWAYVEVLKTLGRAQRNVSRLSLEATTNRHTEASSVKQHREQRQRPKPHGGASLAPISAMSIPSSAIPGASLHVSPDHPKKDVSKSTVGKESPTEPENSSSARPRPPTSPNKRLERSNSLWKRMFLRSTEESAEGERRANGLSTLPSQQRDHAEHSSNSSGSSWPFTRSNSNVSVKNWLWSTSRDVGFYGDDEPLYESSSEGEECKSVVWLNGMAAPANRRLSLGAVAGGPIPTSPERLPVLRETERGSDAGLPGVVSEVMRDAGGAIHDSNNSTRTAMINWEQVLARPRAIAGKKCPSSGNASSESTEAAESHRVNTGSLAKA-MMAVPQVPMKSRFANGVVTVRGFVSRMSSMDTDFGDIACGTARTRSRLTETEKEERASATFSTAVPLGAHGGRSQHVLTTHTPEMDMDRFISRIKWYPVIFVLCWMFTLINGIYTLAVGQANASFFLLLLATLTSRLQGLLNFICYGLNDKLKEAWLQDFLYRRAVASCCRALWCCCFRPCYGNDHGNDEADQARQPNSVVERPLASKDLNDVALVADEMEKGTAVEPASTPPPNPSSPVICETPAKAVVKKTSMAAFATPRHNLRQGQLALAPARPARPSRKVSSLVQSRSRRSRAAXXXXXXXXXXXXXXXXXXXXGVRRQRDAVMRRARTSSQGGIAVTGNLRARKTLQQRDRARARRHELMRQRPSGSDFGRKRLEKTLASTPTATTVDLARSLALPISVSMPVNVAPQETLAGQGGAGIVERTPPPSR 943          
BLAST of mRNA_Ecto-sp13_S_contig776.18997.1 vs. uniprot
Match: A0A7S0DIR4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIR4_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 9.590e-17
Identity = 42/124 (33.87%), Postives = 74/124 (59.68%), Query Frame = 0
Query:    1 LRTYSFQLVVWLAVCDLAVNLSFFLGSPRYGSGLCYTQGVLQWFFQVALIQWTLLIAQSLLEVSSKTRAFDSNKRIPWN-HLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGDSWNIGSLWR 123
            LR++ FQLVVW++  D+  ++   +G+PR G+  CY Q +L  FF ++ + WT  IA ++  V  K ++ ++   +  N HL  WG+S+LL++ P  TG++G     +C +D   + + G+ WR
Sbjct:   26 LRSFVFQLVVWISASDIVFSIGNAIGNPRDGTSQCYAQAILIQFFGLSSMLWTAAIAYTVDRVYLKNKSLENVAELKRNFHLSIWGISSLLTVLPATTGNYGAATG-WCWIDVNQNASAGTAWR 148          
BLAST of mRNA_Ecto-sp13_S_contig776.18997.1 vs. uniprot
Match: A0A7S2TMP9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TMP9_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 4.060e-15
Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 0
Query:    1 LRTYSFQLVVWLAVCDLAVNLSFFLGSPRYGSGLCYTQGVLQWFFQVALIQWTLLIAQSLLEVSSKTRAFDSNKRIPWN-HLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGDSWNIGSLWR 123
            LR++ FQLVVW++  D+  +++  +G+P  GS  CYTQ ++  FF ++ + WT+ IA ++  V  K R+ +    I    H   WG+S LL+I P  TG++G++   +C +D  ++   G+ WR
Sbjct:   60 LRSFVFQLVVWISASDIMYSIANAIGNPSDGSAACYTQAIMIQFFGLSSMLWTVTIAYTVDRVYLKGRSIEEAAEIKKTFHYIVWGISLLLTILPATTGNYGQSTG-WCWIDVKENAEAGTAWR 182          
BLAST of mRNA_Ecto-sp13_S_contig776.18997.1 vs. uniprot
Match: A0A835Z4Y8_9STRA (G_PROTEIN_RECEP_F2_4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.990e-12
Identity = 41/133 (30.83%), Postives = 78/133 (58.65%), Query Frame = 0
Query:    1 LRTYSFQLVVWLAVCDLAVNLSFFLGSPRYGSGLCYTQGVLQWFFQVALIQWTLLIAQSLLEVS---SKTRAFDSNKRIPWNHLWAWGVSALLSIAPLATGSFGRTESLFCGVDSGD-SWNIGSLWRAIFLVV 129
            LRT+SF LV+ +A+ D+  ++++++G+P  GS LC  Q ++Q F Q++++ WT  +A +LL V+     T   +  + +   H + WGV+  L + PL T ++G T S +C +      W  G+ +  ++L++
Sbjct:   55 LRTFSFHLVLMMAIADIGSDITYWMGNPEDGSPLCMVQAMMQNFCQLSVMLWTSCMAYTLLSVAVHEKVTEPAEQKRMLIIYHCYVWGVAGTLMLLPLTTDAYGSTGS-WCWITVDQVGWRYGAFYGILWLII 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig776.18997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KWA8_9PHAE0.000e+090.39G_PROTEIN_RECEP_F2_4 domain-containing protein n=2... [more]
A0A7S0DIR4_9EUKA9.590e-1733.87Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S2TMP9_9EUKA4.060e-1534.68Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A835Z4Y8_9STRA2.990e-1230.83G_PROTEIN_RECEP_F2_4 domain-containing protein n=1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 1..179
e-value: 1.4E-11
score: 46.2
NoneNo IPR availablePANTHERPTHR23112G PROTEIN-COUPLED RECEPTOR 157-RELATEDcoord: 2..673
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 611..897
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..557
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 580..584
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 558..579
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 585..610
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 1..638
NoneNo IPR availableTMHMMTMhelixcoord: 81..100
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 558..580
NoneNo IPR availableTMHMMTMhelixcoord: 120..142
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 1..138
score: 12.203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig776contigEcto-sp13_S_contig776:14081..20932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig776.18997.1mRNA_Ecto-sp13_S_contig776.18997.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig776 14081..20932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig776.18997.1 ID=prot_Ecto-sp13_S_contig776.18997.1|Name=mRNA_Ecto-sp13_S_contig776.18997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=898bp
LRTYSFQLVVWLAVCDLAVNLSFFLGSPRYGSGLCYTQGVLQWFFQVALI
QWTLLIAQSLLEVSSKTRAFDSNKRIPWNHLWAWGVSALLSIAPLATGSF
GRTESLFCGVDSGDSWNIGSLWRAIFLVVVLLSMIMIVWAYVEVLKTLGR
AQRNVSRLSLEATTNRHTEASYVKQHREQRQSPKTYGGASSAPISAMPIH
SNAIPGARLHVSPDQPKKDVSESTVVKESPTEPKNNSAARPRPPTSPNKR
LERSNSFWKWMFLRSTEESAEGERRANGVSTLSSQQRDSAEHSSNSSGSS
WPFTRSNSNVSVKNWLWSTSRDVGFYGDDEPLYDSSSEGEECKSVVWLNG
MAAPANRRLSLGAVAGGPIPTSPERLPVLRETERGNDAGLPGVVSGEMRD
AGGAIHDSNNSTRTAMIKWEQVLARPRAIAGKNCPSSGNASSESTEAAES
HGVKTGSLAKAAMMVVPQVPMKSRFANGVVTARGFVSRMSSMDTDFGDVA
CGTARTRSRLTETEKGERASATSSTAVPLGAHGGRSQHVRTTHTPEMDMD
RFISRIKWYPVIFVLCWMFTLINGIYTIAVGQANASFFLLLLATLTSRLQ
GLLNFICYGLNDKLKQAWLQDFLYRRAVASCCRALWCCCFRPCYGNDDSD
DEADQARQPNSVVERPPASKGLNDVALVADEMEKGSAVEPASTPTPNPPS
PVICETPAKAVVKKTSMAAFATPRHDLRQGQLALAPARPARPSRKVSSLV
QSRSRRSHAAAAGRRKKSGSSTARHSVAAAGVRRQRDAVMRRARTSSHGG
IAVTGNLRARKTLQQRDRARARRNEFIRQRPSGSGFGRIRLESTLASTPT
ATTVDLTRSLALPISVSMPVKVAPQESSAGQGGAGIVGRTPSPSRPT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017981GPCR_2-like