mRNA_Ecto-sp13_S_contig776.18995.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: D7G6Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI) HSP 1 Score: 654 bits (1686), Expect = 2.420e-231 Identity = 373/396 (94.19%), Postives = 380/396 (95.96%), Query Frame = 1
Query: 1 NQLAPLEAGEDGTFDVGDASPPPSPPKRVGSARSKQNATATAVSTAPATDGDPLSSPPIKDDWEKVDLDGADEGPPPPAGNAGQGRDAGAPPSAPEYAQEDFQDAVETQDESATQKTGTPGAITTEDGSSCCVDDLPGKACGQAARVESSAAAPSRAVVEQRPPGLGGRVNAIASGLANVRLPMGYGRQMRQGEEDGLVDSDGEEQFHDAQDSGPGVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
N+ APLEAGEDGTFDVGDASPPPSPPKRVGSAR QNATAT VSTAPATDGDP SPPIKDDWEKVDLDGADEG PPPAGNA QGR+AGAPPSAPEYAQEDFQDAVETQDESATQ+ GT GA TTEDG+SCCVDD PGKACGQAARVESSAAAP AVVEQRPPGLGGRVN IASGLANVRLPMGYGRQMRQ EEDGLVDSDGEEQFHDAQDSGPGVVKDATKAR+MKEAGNEHYKNG+FEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVV+DCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER
Sbjct: 6 NEEAPLEAGEDGTFDVGDASPPPSPPKRVGSARRTQNATATTVSTAPATDGDPCGSPPIKDDWEKVDLDGADEGLPPPAGNASQGREAGAPPSAPEYAQEDFQDAVETQDESATQQAGT-GATTTEDGTSCCVDDSPGKACGQAARVESSAAAPPHAVVEQRPPGLGGRVNVIASGLANVRLPMGYGRQMRQDEEDGLVDSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A835YHX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.080e-39 Identity = 104/187 (55.61%), Postives = 140/187 (74.87%), Query Frame = 1
Query: 649 VVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXS------LRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGS-YSINFER 1188
+ KDA KA++MKE GN +Y + DA D YT+AL +CP+DE ++++AV+ +NRA HLRLE+++ VV+DCT AL + P YVKALLR XXXXXXXXXXXXXXXXXXXXXX ++ A + RL+KLH +K E++K+EA+GKLK+LGN+LLG+FGLS DNFK+ QD + G Y+I+F +
Sbjct: 1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S2S6C6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA) HSP 1 Score: 147 bits (371), Expect = 6.320e-37 Identity = 100/180 (55.56%), Postives = 130/180 (72.22%), Query Frame = 1
Query: 649 VVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
V+++A A K+KE GNE YK+ ++ +A+D Y+ AL Y PE++ + RAV+L+NRA L L YE V++DCT ALE DP YVKALLR XXXXXXXXXXXXXXXXXXXX A + RL+ + K+E++K+E +GKLKDLGN +LG FG+S DNFK QDP TGSYSI+F++
Sbjct: 60 VIRNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A0M0J422_9EUKA (Tetratricopeptide repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA) HSP 1 Score: 144 bits (362), Expect = 5.290e-36 Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
Query: 670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1182
AR KE GN H+K +++ A+D YT A+ P DE +RAVF ANRA +++E+E VVDDCTAALEL P Y KAL+R S + +V RLEK +K EK KEE +GKLKDLGN++LG FGLS DNFK +DPNTGSYSI+F
Sbjct: 42 ARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDEP---ERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISF 209
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S0J1B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA) HSP 1 Score: 142 bits (359), Expect = 2.440e-35 Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
AR KE GN H+ G+++DA++ Y+ A+ P D +RAVF ANRA + ++ EYE V++DCT+AL + P YVKAL+R + A ++PRLE N K EK K+E +GKLKDLGN++LG FG+S DNFK ++DP+TGSY+I+F++
Sbjct: 62 ARTAKEQGNLHFGKGEWDDAIECYSEAIEVAPADSP---ERAVFFANRAACYSKIHEYEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEKDPSTGSYNISFQQ 231
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S3HEF4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA) HSP 1 Score: 142 bits (359), Expect = 4.080e-35 Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 655 KDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSIN 1179
K+ +KA + KE GN +++N +++DA++ Y+ A+ +CPEDE +K++ A F NR+ + +EE+E VV+DCTAAL L YVK + R + + + RL+ ++DK KMK+EA+GKLK+LGN++LGNFG+S DNFKM QDP TGS++I+
Sbjct: 73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: F0WQR1_9STRA (Mitochondrial Protein Translocase (MPT) Family puta n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQR1_9STRA) HSP 1 Score: 142 bits (358), Expect = 7.510e-35 Identity = 84/200 (42.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query: 604 DGEEQFHDAQDSGPGVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER*LPSN 1203
D E D Q + +KD KA K KE GN+ + G DA++ Y+ AL Y P E H ++A++ +NRA RL E +DDCT A+ L P Y+KALLR S A+ S RL+K+ +++ EKMK E + KLK GN LLG FGLSTDNFKM QDPNTGSY+INF + +N
Sbjct: 62 DAEAAESDGQSAIKECIKDEGKASKAKEIGNKFFALGRSLDAIECYSAALQYSPIGEEHSNEKAIYFSNRAACLARLNRVEETIDDCTQAIALSPKYIKALLRRAEAYEKLDKLEEALRDYDEVLKIDASHSTARSSHTRLKKIVDERAEKMKAEMMEKLKGFGNTLLGKFGLSTDNFKMVQDPNTGSYNINFVQNAQAN 261
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A484E7C7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C7_BRELC) HSP 1 Score: 142 bits (357), Expect = 8.170e-35 Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 1
Query: 646 GVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
G + KA KE GN+ + G + DA++ YT AL CP +E + +RAV+ +NRA LRL E +DDCT A+ L P+YVKALLR ++ A +S RL+K+ +++ EKMK E + KLK GN +LG FGLSTDNFKM QDP TGSY+INFE+
Sbjct: 68 GKTETVKKASSAKELGNKFFTRGSYLDAIECYTTALKLCPSEEEYAYNRAVYFSNRAACLLRLGRTEESIDDCTQAVTLSPTYVKALLRRAEAYEKLDKLEEALADFDAVLKIDPTVPAAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFKMVQDPATGSYNINFEQ 248
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A852B537_9CORV (TTC1 protein (Fragment) n=1 Tax=Chloropsis cyanopogon TaxID=1218682 RepID=A0A852B537_9CORV) HSP 1 Score: 142 bits (359), Expect = 8.640e-35 Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 679 MKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1182
+KE GNEH+K GD+ +A D YT AL CP +KDRAV +NRA ++ ++ E + DCT A+ELDP YV+ALLR XXXXXXXXXXXXXXXXXS+ A+E+ RL + ++NEK+K+E +GKLKDLGN +L FGLST+NF++KQD +TGSYSINF
Sbjct: 106 LKEKGNEHFKKGDYGEAEDSYTKALQICPA--CFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPHYVRALLRRAELYEKTEXXXXXXXXXXXXXXXXXSIHQAREACMRLPQQIEERNEKLKKEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 271
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: UPI001F04FC2B (tetratricopeptide repeat protein 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04FC2B) HSP 1 Score: 140 bits (352), Expect = 9.460e-35 Identity = 75/173 (43.35%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
A ++K+ GN+H++ ++ +A D YT A+ YCP++E K ++F ANRA +LE+YE + DC ALEL P+Y+KA LR + LA E++ RL K+EK+K+E IGKLKDLGN +L FGLSTDNFK++QDPN+G YSINF++
Sbjct: 29 ALELKKKGNDHFRRQEYTEAQDLYTKAIKYCPKEETENK--SIFYANRAACCQKLEDYENGISDCDRALELSPNYLKARLRRAQCYEKVDKLEEALEDYRIVFENDKTCHLAHEAILRLPDEIKIKHEKLKDEMIGKLKDLGNMVLRPFGLSTDNFKLQQDPNSGGYSINFQK 199 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig776.18995.1 >prot_Ecto-sp13_S_contig776.18995.1 ID=prot_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp MGYGRQMRQGEEDGLVDSDGEEQFHDAQDSGPGVVKDATKARKMKEAGNEback to top mRNA from alignment at Ecto-sp13_S_contig776:5649..8741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig776.18995.1 ID=mRNA_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3093bp|location=Sequence derived from alignment at Ecto-sp13_S_contig776:5649..8741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig776:5649..8741+ >mRNA_Ecto-sp13_S_contig776.18995.1 ID=mRNA_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig776:5649..8741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |