mRNA_Ecto-sp13_S_contig776.18995.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig776.18995.1
Unique NamemRNA_Ecto-sp13_S_contig776.18995.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: D7G6Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI)

HSP 1 Score: 654 bits (1686), Expect = 2.420e-231
Identity = 373/396 (94.19%), Postives = 380/396 (95.96%), Query Frame = 1
Query:    1 NQLAPLEAGEDGTFDVGDASPPPSPPKRVGSARSKQNATATAVSTAPATDGDPLSSPPIKDDWEKVDLDGADEGPPPPAGNAGQGRDAGAPPSAPEYAQEDFQDAVETQDESATQKTGTPGAITTEDGSSCCVDDLPGKACGQAARVESSAAAPSRAVVEQRPPGLGGRVNAIASGLANVRLPMGYGRQMRQGEEDGLVDSDGEEQFHDAQDSGPGVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
            N+ APLEAGEDGTFDVGDASPPPSPPKRVGSAR  QNATAT VSTAPATDGDP  SPPIKDDWEKVDLDGADEG PPPAGNA QGR+AGAPPSAPEYAQEDFQDAVETQDESATQ+ GT GA TTEDG+SCCVDD PGKACGQAARVESSAAAP  AVVEQRPPGLGGRVN IASGLANVRLPMGYGRQMRQ EEDGLVDSDGEEQFHDAQDSGPGVVKDATKAR+MKEAGNEHYKNG+FEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVV+DCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER
Sbjct:    6 NEEAPLEAGEDGTFDVGDASPPPSPPKRVGSARRTQNATATTVSTAPATDGDPCGSPPIKDDWEKVDLDGADEGLPPPAGNASQGREAGAPPSAPEYAQEDFQDAVETQDESATQQAGT-GATTTEDGTSCCVDDSPGKACGQAARVESSAAAPPHAVVEQRPPGLGGRVNVIASGLANVRLPMGYGRQMRQDEEDGLVDSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A835YHX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.080e-39
Identity = 104/187 (55.61%), Postives = 140/187 (74.87%), Query Frame = 1
Query:  649 VVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXS------LRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGS-YSINFER 1188
            + KDA KA++MKE GN +Y    + DA D YT+AL +CP+DE  ++++AV+ +NRA  HLRLE+++ VV+DCT AL + P YVKALLR XXXXXXXXXXXXXXXXXXXXXX          ++ A   + RL+KLH +K E++K+EA+GKLK+LGN+LLG+FGLS DNFK+ QD + G  Y+I+F +
Sbjct:    1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S2S6C6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 6.320e-37
Identity = 100/180 (55.56%), Postives = 130/180 (72.22%), Query Frame = 1
Query:  649 VVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
            V+++A  A K+KE GNE YK+ ++ +A+D Y+ AL Y PE++ +   RAV+L+NRA   L L  YE V++DCT ALE DP YVKALLR      XXXXXXXXXXXXXXXXXXXX    A +   RL+ +   K+E++K+E +GKLKDLGN +LG FG+S DNFK  QDP TGSYSI+F++
Sbjct:   60 VIRNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A0M0J422_9EUKA (Tetratricopeptide repeat protein 1-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J422_9EUKA)

HSP 1 Score: 144 bits (362), Expect = 5.290e-36
Identity = 83/171 (48.54%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1182
            AR  KE GN H+K  +++ A+D YT A+   P DE    +RAVF ANRA    +++E+E VVDDCTAALEL P Y KAL+R                          S +    +V RLEK   +K EK KEE +GKLKDLGN++LG FGLS DNFK  +DPNTGSYSI+F
Sbjct:   42 ARAHKERGNVHFKAQEWDAAIDCYTHAIEVMPPDEP---ERAVFFANRAAAFAKIDEHEGVVDDCTAALELQPQYTKALVRRALAREALDQPTEALEDAKTAAALDPSDKGLVAAVSRLEKASAEKLEKQKEEMLGKLKDLGNSVLGKFGLSLDNFKAVKDPNTGSYSISF 209          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S0J1B8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J1B8_9EUKA)

HSP 1 Score: 142 bits (359), Expect = 2.440e-35
Identity = 74/173 (42.77%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
            AR  KE GN H+  G+++DA++ Y+ A+   P D     +RAVF ANRA  + ++ EYE V++DCT+AL + P YVKAL+R                            + A  ++PRLE   N K EK K+E +GKLKDLGN++LG FG+S DNFK ++DP+TGSY+I+F++
Sbjct:   62 ARTAKEQGNLHFGKGEWDDAIECYSEAIEVAPADSP---ERAVFFANRAACYSKIHEYEAVIEDCTSALAIKPEYVKALVRRAQAREELDQPTEALEDMRTAGKLDPDAKAATSAIPRLEAASNAKLEKQKDEMLGKLKDLGNSVLGRFGMSLDNFKAEKDPSTGSYNISFQQ 231          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A7S3HEF4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.080e-35
Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = 1
Query:  655 KDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSIN 1179
            K+ +KA + KE GN +++N +++DA++ Y+ A+ +CPEDE +K++ A F  NR+  +  +EE+E VV+DCTAAL L   YVK + R                          +     + + RL+  ++DK  KMK+EA+GKLK+LGN++LGNFG+S DNFKM QDP TGS++I+
Sbjct:   73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: F0WQR1_9STRA (Mitochondrial Protein Translocase (MPT) Family puta n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQR1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 7.510e-35
Identity = 84/200 (42.00%), Postives = 109/200 (54.50%), Query Frame = 1
Query:  604 DGEEQFHDAQDSGPGVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER*LPSN 1203
            D E    D Q +    +KD  KA K KE GN+ +  G   DA++ Y+ AL Y P  E H  ++A++ +NRA    RL   E  +DDCT A+ L P Y+KALLR                          S   A+ S  RL+K+ +++ EKMK E + KLK  GN LLG FGLSTDNFKM QDPNTGSY+INF +   +N
Sbjct:   62 DAEAAESDGQSAIKECIKDEGKASKAKEIGNKFFALGRSLDAIECYSAALQYSPIGEEHSNEKAIYFSNRAACLARLNRVEETIDDCTQAIALSPKYIKALLRRAEAYEKLDKLEEALRDYDEVLKIDASHSTARSSHTRLKKIVDERAEKMKAEMMEKLKGFGNTLLGKFGLSTDNFKMVQDPNTGSYNINFVQNAQAN 261          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A484E7C7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C7_BRELC)

HSP 1 Score: 142 bits (357), Expect = 8.170e-35
Identity = 79/181 (43.65%), Postives = 105/181 (58.01%), Query Frame = 1
Query:  646 GVVKDATKARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
            G  +   KA   KE GN+ +  G + DA++ YT AL  CP +E +  +RAV+ +NRA   LRL   E  +DDCT A+ L P+YVKALLR                          ++  A +S  RL+K+ +++ EKMK E + KLK  GN +LG FGLSTDNFKM QDP TGSY+INFE+
Sbjct:   68 GKTETVKKASSAKELGNKFFTRGSYLDAIECYTTALKLCPSEEEYAYNRAVYFSNRAACLLRLGRTEESIDDCTQAVTLSPTYVKALLRRAEAYEKLDKLEEALADFDAVLKIDPTVPAAVKSHERLQKIVHERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFKMVQDPATGSYNINFEQ 248          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: A0A852B537_9CORV (TTC1 protein (Fragment) n=1 Tax=Chloropsis cyanopogon TaxID=1218682 RepID=A0A852B537_9CORV)

HSP 1 Score: 142 bits (359), Expect = 8.640e-35
Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 1
Query:  679 MKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINF 1182
            +KE GNEH+K GD+ +A D YT AL  CP     +KDRAV  +NRA   ++ ++ E  + DCT A+ELDP YV+ALLR         XXXXXXXXXXXXXXXXXS+  A+E+  RL +   ++NEK+K+E +GKLKDLGN +L  FGLST+NF++KQD +TGSYSINF
Sbjct:  106 LKEKGNEHFKKGDYGEAEDSYTKALQICPA--CFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPHYVRALLRRAELYEKTEXXXXXXXXXXXXXXXXXSIHQAREACMRLPQQIEERNEKLKKEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINF 271          
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Match: UPI001F04FC2B (tetratricopeptide repeat protein 1-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04FC2B)

HSP 1 Score: 140 bits (352), Expect = 9.460e-35
Identity = 75/173 (43.35%), Postives = 106/173 (61.27%), Query Frame = 1
Query:  670 ARKMKEAGNEHYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVDDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 1188
            A ++K+ GN+H++  ++ +A D YT A+ YCP++E   K  ++F ANRA    +LE+YE  + DC  ALEL P+Y+KA LR                          +  LA E++ RL      K+EK+K+E IGKLKDLGN +L  FGLSTDNFK++QDPN+G YSINF++
Sbjct:   29 ALELKKKGNDHFRRQEYTEAQDLYTKAIKYCPKEETENK--SIFYANRAACCQKLEDYENGISDCDRALELSPNYLKARLRRAQCYEKVDKLEEALEDYRIVFENDKTCHLAHEAILRLPDEIKIKHEKLKDEMIGKLKDLGNMVLRPFGLSTDNFKLQQDPNSGGYSINFQK 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig776.18995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6Y9_ECTSI2.420e-23194.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHX5_9STRA1.080e-3955.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S6C6_9STRA6.320e-3755.56Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0M0J422_9EUKA5.290e-3648.54Tetratricopeptide repeat protein 1-like protein n=... [more]
A0A7S0J1B8_9EUKA2.440e-3542.77Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S3HEF4_9STRA4.080e-3541.14Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0WQR1_9STRA7.510e-3542.00Mitochondrial Protein Translocase (MPT) Family put... [more]
A0A484E7C7_BRELC8.170e-3543.65Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A852B537_9CORV8.640e-3555.95TTC1 protein (Fragment) n=1 Tax=Chloropsis cyanopo... [more]
UPI001F04FC2B9.460e-3543.35tetratricopeptide repeat protein 1-like n=1 Tax=Xe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig776contigEcto-sp13_S_contig776:5649..8741 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score358.2
Seed ortholog evalue2.6e-96
Seed eggNOG ortholog2880.D7G6Y9
Preferred nameTTC1
Model size1811
KEGG koko:K04136,ko:K07562
KEGG Pathwayko03008,ko03013,ko04020,ko04022,ko04080,ko04261,ko04270,ko04970,map03008,map03013,map04020,map04022,map04080,map04261,map04270,map04970
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000209,GO:0001664,GO:0001666,GO:0002931,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005783,GO:0005829,GO:0006457,GO:0006464,GO:0006508,GO:0006511,GO:0006515,GO:0006605,GO:0006626,GO:0006807,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010498,GO:0010604,GO:0010646,GO:0010648,GO:0010817,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016234,GO:0016567,GO:0016740,GO:0017015,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019900,GO:0019904,GO:0019941,GO:0023051,GO:0023052,GO:0023057,GO:0030016,GO:0030017,GO:0030018,GO:0030162,GO:0030163,GO:0030433,GO:0030512,GO:0030544,GO:0030579,GO:0030674,GO:0030911,GO:0030968,GO:0031072,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031334,GO:0031371,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031625,GO:0031647,GO:0031674,GO:0031943,GO:0031974,GO:0031981,GO:0032091,GO:0032268,GO:0032270,GO:0032350,GO:0032434,GO:0032436,GO:0032446,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034450,GO:0034605,GO:0034613,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036293,GO:0036294,GO:0036503,GO:0042176,GO:0042221,GO:0042405,GO:0042802,GO:0042803,GO:0042886,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043292,GO:0043393,GO:0043412,GO:0043632,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045184,GO:0045732,GO:0045862,GO:0046332,GO:0046907,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051082,GO:0051087,GO:0051098,GO:0051100,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0051787,GO:0051788,GO:0051865,GO:0051879,GO:0060090,GO:0060255,GO:0061136,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070534,GO:0070585,GO:0070647,GO:0070727,GO:0070887,GO:0071218,GO:0071310,GO:0071453,GO:0071456,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072655,GO:0080090,GO:0090034,GO:0090035,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0099080,GO:0099081,GO:0099512,GO:0101031,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901800,GO:1902494,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903844,GO:1903845,GO:1990234,GO:2000058,GO:2000060
Exons5
EggNOG free text desc.protein binding, bridging
EggNOG OGsKOG4234@1,KOG4234@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-01_011720.1
Cds size642
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig776.18995.1prot_Ecto-sp13_S_contig776.18995.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig776 6198..8121 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464045.8997176-UTR-Ecto-sp13_S_contig776:5648..61971681464045.8997176-UTR-Ecto-sp13_S_contig776:5648..6197Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig776 5649..6197 +
1681464045.9564388-UTR-Ecto-sp13_S_contig776:8121..87411681464045.9564388-UTR-Ecto-sp13_S_contig776:8121..8741Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig776 8122..8741 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464045.9108756-CDS-Ecto-sp13_S_contig776:6197..63461681464045.9108756-CDS-Ecto-sp13_S_contig776:6197..6346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig776 6198..6346 +
1681464045.9200382-CDS-Ecto-sp13_S_contig776:6698..68401681464045.9200382-CDS-Ecto-sp13_S_contig776:6698..6840Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig776 6699..6840 +
1681464045.929069-CDS-Ecto-sp13_S_contig776:7106..72271681464045.929069-CDS-Ecto-sp13_S_contig776:7106..7227Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig776 7107..7227 +
1681464045.9380045-CDS-Ecto-sp13_S_contig776:7459..75731681464045.9380045-CDS-Ecto-sp13_S_contig776:7459..7573Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig776 7460..7573 +
1681464045.9471486-CDS-Ecto-sp13_S_contig776:8005..81211681464045.9471486-CDS-Ecto-sp13_S_contig776:8005..8121Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig776 8006..8121 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig776.18995.1

>prot_Ecto-sp13_S_contig776.18995.1 ID=prot_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp
MGYGRQMRQGEEDGLVDSDGEEQFHDAQDSGPGVVKDATKARKMKEAGNE
HYKNGDFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYET
VVDDCTAALELDPSYVKALLRRAQANEHLEKYDMALEDAKELLTLDPSLR
LAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQ
DPNTGSYSINFER*
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mRNA from alignment at Ecto-sp13_S_contig776:5649..8741+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig776.18995.1 ID=mRNA_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3093bp|location=Sequence derived from alignment at Ecto-sp13_S_contig776:5649..8741+ (Ectocarpus species13 EcNAP12_S_4_19m)
AACCAGCTGGCACCACTGGAGGCCGGGGAGGACGGCACCTTTGACGTCGG AGACGCTTCGCCGCCCCCGTCGCCACCCAAACGCGTTGGAAGTGCCCGTA GTAAACAAAACGCGACCGCTACTGCTGTGTCTACGGCGCCGGCAACCGAT GGCGACCCTTTGAGCTCGCCACCAATAAAAGACGACTGGGAAAAAGTGGA TCTAGACGGGGCCGACGAGGGACCGCCGCCTCCTGCAGGCAACGCTGGCC AGGGGAGAGACGCAGGAGCGCCACCATCGGCACCGGAATACGCACAGGAA GATTTCCAAGACGCGGTCGAAACGCAAGACGAAAGCGCTACCCAAAAGAC CGGAACCCCCGGAGCCATAACCACAGAAGACGGCAGCAGTTGTTGTGTAG ACGATTTGCCGGGCAAGGCTTGCGGGCAAGCAGCGCGGGTCGAAAGCTCG GCCGCCGCACCATCGCGTGCTGTTGTGGAGCAGCGGCCACCAGGGTTGGG CGGGAGGGTGAACGCGATCGCTTCGGGGCTGGCCAACGTGCGACTGCCGA TGGGATACGGCAGACAAATGCGGCAGGGAGAGGAGGATGGTCTGGTAGAC AGTGATGGAGAAGAGCAGTTCCACGATGCTCAAGACAGCGGCCCTGGCGT GGTTAAGGACGCGACCAAGGCCCGAAAGATGAAGGAGGCGGGCAACGAGT GAGAAGTTTCCCTTTGTGGTACAGTTGCTTGGGGGTGTATGTACAGTACT TCGTGAAGCGTGTCCCTGAAGCACTGATCGGGGCTCGGCCGCACGGGGGT CCCTGCATGCATTCTGCCGCCTTGAAAAAGCAGTTGAGCAATTGCTTCAT TTTGCTCGCTGCCTTGTACTGAGCCGCCTTCTGTTTCACAACCTACACCC GAGCAGAGCAGCAGTGAACCCGGCTACCGGACAGTCAACAGAGACCCGCC TCGCACAAAGAATCCAAACACTGATAACCCCATGGCTTGCTCGCGTCGCG CGGCGGCGGTTGCTTGTCACGAACCGGCAATATGGCGACACGTGTATCAG ACACTACAAGAACGGAGATTTCGAAGACGCAGTCGACTACTACACCATGG CGCTCCACTACTGTCCAGAGGACGAGGCGCACAAGAAAGACAGGGCTGTG TTCCTTGCAAACCGCGCTCAGGGCCACCTCCGATTGGAAGAGGTGGGTTC GACTGCTGCGCGTCGTGAACGATGTTGTGTGTCTACACACTGCTGGAGCA GTCGATGTTGTCCGTGAACCGTGAAGCCATACCCTGAGACATTGCTATTG TGCGTCAGCAGCACGTTGCTCGATTGGATTTGTTGGACAGTTAATCCGGC AGGTTTTTATCGTAGTTGTTGCTTGATAGTTGCGTTCGTTTGCCTCGATC TTACCCGCTCCTTTTCGTTTGTCCTGATCCCTGTTCCACACTCCGTTGCC TGTGTCAGTACGAAACGGTGGTGGATGACTGCACGGCTGCGCTAGAGCTC GACCCAAGCTACGTGAAAGCGCTCTTGCGACGAGCGCAAGCCAATGAGCA CCTCGAGAAGTACGACATGGCACTGGAAGGTGCGAACGTCCGATTCTCCA CCAAAATGTATTAGTGGTTCCGAGACTCGCAACTTCGTAATCTTGGTACA ATAGTCTAAAACGTTGCTCGTATCGACAGCGAAGGCTCCAACACCTATTG TAGACGCGGGTGTTCGACCCTCTCAGTGTTAACCTGCAGCAGCTTGGCAG GCTGTTCGCTTATTTTTTGTCGCGGGAACCTTTCGTTGGTATGCTTTTTT CTTCGTAACAGACGCGAAGGAGTTGCTAACACTTGATCCGAGTCTCCGCT TGGCGAAGGAGAGCGTGCCGAGGTTGGAGAAGCTTCACAACGACAAGAAC GAGAAAATGAAAGAAGAAGCGATCGGTGAGTCTTTGTCCGTCAATGCACC GATCGTGTGTTCACGAGGCGCAGACGGCTTGGGCTTTGGCGTGCGGCTTC GTGGAAATTCCCTTGCAGACCCTCGTGCCCTCACTAATGGGGGGCGCGCA CCAAGGTGCAACGGGTCGTCTCTTGACTGGATAGTTTTGTCGGAATCTAG AGAATCTGAATCCAGGTCAAGCCATCGCCGGTTATCCCGGGAACATGCAA CTGGTACAGGCCCTGAATTGGCTTTGAATCGGACATGCTCCTTCGTTTGT TCAAGTTGGGTTCTCGCTTCACCTGCTTGGGCAAGATCGTTTTGGTTGCC ATGTACCCTGAAACGTACTGGTAACATCTGTCACGGTGTGCTGGAAGCAA TACCGATGGTGTGCTGTCCTCACTCAATTGTCTGCTGCTTTGTGTTTTGA TGCACAGGCAAGCTGAAAGACCTCGGCAATGCCCTTCTCGGGAACTTCGG CTTGAGCACGGACAACTTCAAGATGAAACAAGACCCAAACACGGGCTCCT ATAGCATCAATTTCGAGAGATGATTGCCAAGCAATCCCCTTAGCGACGTC ACGTGATGCTTATTTGGCGGCACGAGTCCCAGCTTCCAGCTTTGGTGTTT TCTCAGTCATAATGAACCCTTTTGACAGTCGCAACATACCTTACGTGTTG TCCTAGCGTCAGTGGACACCTTGTGTAGGCGTAAGGCTCGTTTGTGGGAA TGATTTTTGAGTAGGCACCGGCAACATAAACACCAGTGAGACTTGTTTGA GGTTAAACTTGAACGTCATGGTTCTCTAGTGTAAATTTTCGCGGTGCTTG TACAGTGCATGCTGGAAGCTGTTTTCGAGAGGGCGAGATCGAGAGAATGG ATTAGCGCACTAAGGTTGATGTCGTAGCCATAATTTGTAGTAGTGTCTTG TGGAGATGTACGTGGTTTGCGTACTCTGTCAAACGCACTTTTGTATCCCA TCCCCCAATTTCCACGAACCTGCTGCTCAGCGAATGGGTCAGGGCATTTT GAGACAACCAGCAAGTGCGGGGGTTCTCCACTGAGAGAGGAAGGAAGTAA TGAGGACGTTGACCGAGACGTTTGAAAATCACCCCAACACTCTCTTCTAC ACCTTCTCAACATAACATGCAGAGATACGCAAGACAACTACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig776:5649..8741+

>mRNA_Ecto-sp13_S_contig776.18995.1 ID=mRNA_Ecto-sp13_S_contig776.18995.1|Name=mRNA_Ecto-sp13_S_contig776.18995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig776:5649..8741+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGATACGGCAGACAAATGCGGCAGGGAGAGGAGGATGGTCTGGTAGA
CAGTGATGGAGAAGAGCAGTTCCACGATGCTCAAGACAGCGGCCCTGGCG
TGGTTAAGGACGCGACCAAGGCCCGAAAGATGAAGGAGGCGGGCAACGAA
CACTACAAGAACGGAGATTTCGAAGACGCAGTCGACTACTACACCATGGC
GCTCCACTACTGTCCAGAGGACGAGGCGCACAAGAAAGACAGGGCTGTGT
TCCTTGCAAACCGCGCTCAGGGCCACCTCCGATTGGAAGAGTACGAAACG
GTGGTGGATGACTGCACGGCTGCGCTAGAGCTCGACCCAAGCTACGTGAA
AGCGCTCTTGCGACGAGCGCAAGCCAATGAGCACCTCGAGAAGTACGACA
TGGCACTGGAAGACGCGAAGGAGTTGCTAACACTTGATCCGAGTCTCCGC
TTGGCGAAGGAGAGCGTGCCGAGGTTGGAGAAGCTTCACAACGACAAGAA
CGAGAAAATGAAAGAAGAAGCGATCGGCAAGCTGAAAGACCTCGGCAATG
CCCTTCTCGGGAACTTCGGCTTGAGCACGGACAACTTCAAGATGAAACAA
GACCCAAACACGGGCTCCTATAGCATCAATTTCGAGAGATGA
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