prot_Ecto-sp13_S_contig7759.18992.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7759.18992.1
Unique Nameprot_Ecto-sp13_S_contig7759.18992.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length49
Homology
BLAST of mRNA_Ecto-sp13_S_contig7759.18992.1 vs. uniprot
Match: A0A6H5JZM4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM4_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.510e-11
Identity = 32/36 (88.89%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    6 PNILESPGYGRLQGETDGTLPPRATRRARTVMEKRR 41
            PNILESPGYGR +GETDG LPPRAT RARTVMEKRR
Sbjct:  124 PNILESPGYGRPKGETDGILPPRATWRARTVMEKRR 159          
BLAST of mRNA_Ecto-sp13_S_contig7759.18992.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 4.900e-11
Identity = 34/42 (80.95%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 SSHHRPNILESPGYGRLQGETDGTLPPRATRRARTVMEKRRT 42
            SS  R NILESPGYGR +GETDG LPPRAT  ARTVMEKRRT
Sbjct:    3 SSVERANILESPGYGRPKGETDGALPPRATWSARTVMEKRRT 44          
BLAST of mRNA_Ecto-sp13_S_contig7759.18992.1 vs. uniprot
Match: A0A6H5JTK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.530e-8
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    5 RPNILESPGYGRLQGETDGTLPPRATRRARTVMEKRRT 42
            RP+ILESPG G  +GETDGTLP RA+ RART+MEKRRT
Sbjct:  202 RPSILESPGCGIPKGETDGTLPTRASWRARTLMEKRRT 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7759.18992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZM4_9PHAE2.510e-1188.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIA9_ECTSI4.900e-1180.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTK5_9PHAE4.530e-876.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7759contigEcto-sp13_S_contig7759:4250..4396 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7759.18992.1mRNA_Ecto-sp13_S_contig7759.18992.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7759 4250..4396 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7759.18992.1 ID=prot_Ecto-sp13_S_contig7759.18992.1|Name=mRNA_Ecto-sp13_S_contig7759.18992.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp
SSHHRPNILESPGYGRLQGETDGTLPPRATRRARTVMEKRRTTSVKET*
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