prot_Ecto-sp13_S_contig7753.18985.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7753.18985.1
Unique Nameprot_Ecto-sp13_S_contig7753.18985.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length864
Homology
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: A0A6H5K157_9PHAE (Toprim domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K157_9PHAE)

HSP 1 Score: 1083 bits (2800), Expect = 0.000e+0
Identity = 730/911 (80.13%), Postives = 746/911 (81.89%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSDPPAQGXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------KKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKCSEEVSRHGLYLGGERRQWLFNALTASVSPDPALPSAVAGRGGGDGQDGVGRDSTHAAWGGPTQEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEANRVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDSPLASADPPKTAAAPEPPGVAXXXXXXXXXXXXXXXXXVERLKVRQSELFEMIQEQREEVTELEARRKAFTNRLPKVRAETEAIRKQEARAKRQSSAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGELSVEDLPYRFLDEDKEPEEGINIYDVEGNIAAAVAAMEAAEAGDAALPXXXXXXXXXXXXXXXX-LHRPRQQHPQQQGQDQHKPQFSSDATHRQAVAREARRRDAAEGVVAAAPSXXXXXXXXXXXXXXXVGASWPAPVAGRLGNNRDDDQRPGVEVGATGTVRDTATTTSPPSLSGRHPAAGGSHAGEAGKGARSEWNARRGAGAPQAVAVMGGARGGGGRGLDDAVVERMAKEAEEQIEQMSEDDGVFDGCETGW 863
            MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWS WYGDSILADHDFA DANAFRRCTDRL GFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGS PPAQG XXXXXXXXXXXXXXXXXXXXXX                                               KKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESK TELALRGRILDQAQRFLLALVVHDPSRRAKC EEVSRHGL LGGERRQWLFNALTASVSPDPAL SA A    GD  DGVG DS    WGGPT EALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDE E+EDTLDWVFERAEA RVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALD P ASA+PPKTAAAPE PGVA                 V+RLKVRQSELFEMIQEQREEVTELEARRKAFT RLPKVRAETEAIRK+EARAKRQS  +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     DGGELSVEDLPYRFLDED++PE+GINIYDVEGNIAAA+A             XXXXXXXXXXXXXXXX LHRPRQQ         H+PQ+SSDATH QAVAREARRR A EGVV     XXXXXXXXXXXXXXX   S PAPVA RLG+NRD+DQRPGVEVGATGTVRDTATTTSPP LSGRHPAAGGSHAGEA KGARSEW+ARRGAGAPQAVAVMG         LDDAVVERMA+EAEEQ+EQMSEDDG FDG ETGW
Sbjct:  409 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSVWYGDSILADHDFASDANAFRRCTDRLAGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSAPPAQGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSAAVNGAGGGGYLTGTEGMEGVDVVRDHSWVMERVRMKKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKGTELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLSLGGERRQWLFNALTASVSPDPALRSAAAXXXXGDEPDGVGCDSPP-GWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEREREDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPPHASAEPPKTAAAPESPGVAAVKGQGVGRSRAEAQAEVQRLKVRQSELFEMIQEQREEVTELEARRKAFTKRLPKVRAETEAIRKREARAKRQS--LAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRYDERGQQQLQQLRREAGGEDGGELSVEDLPYRFLDEDQDPEDGINIYDVEGNIAAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRPRQQQXXXXXXXHHQPQYSSDATHGQAVAREARRRHATEGVVXXXXXXXXXXXXXXXXXXXXE-TSGPAPVAARLGDNRDNDQRPGVEVGATGTVRDTATTTSPPPLSGRHPAAGGSHAGEASKGARSEWDARRGAGAPQAVAVMGXXXXXXXXXLDDAVVERMAREAEEQMEQMSEDDGDFDGNETGW 1315          
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: D7G3B8_ECTSI (DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B8_ECTSI)

HSP 1 Score: 921 bits (2381), Expect = 0.000e+0
Identity = 612/864 (70.83%), Postives = 619/864 (71.64%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSDPPAQGXXXXXXXXXXXXXXXXXXXXXXXKKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKCSEEVSRHGLYLGGERRQWLFNALTASVSPDPALPSAVAGRGGGDG-QDGVGRDSTHAAWGGPTQEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEANRVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDSPLASADPPKTAAAPEPPGVAXXXXXXXXXXXXXXXXXVERLKVRQSELFEMIQEQREEVTELEARRKAFTNRLPKVRAETEAIRKQEARAKRQSSAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGELSVEDLPYRFLDEDKEPEEGINIYDVEGNIAAAVAAMEAAEAGDAALPXXXXXXXXXXXXXXXXLHRPRQQHPQQQGQDQHKPQFSSDATHRQAVAREARRRDAAEGVVAAAPSXXXXXXXXXXXXXXXVGASWPAPVAGRLGNNRDDDQRPGVEVGATGTVRDTATTTSPPSLSGRHPAAGGSHAGEAGKGARSEWNARRGAGAPQAVAVMGGARGGGGRGLDDAVVERMAKEAEEQIEQMSEDDGVFDGCETGW 863
            MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPED GCKDPADFLQAHGAEEFRAKVM KAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGS PPAQG                       KKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKC EEVSRHGLYLGGERRQWLFNALTASVSPDPALPSA          QDG GRDS   AWGGPT EALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEA RVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALD P AS +PP+TA APE PGVA   XXXXXXXXXXXXXXVERLKVRQSELFEMIQEQREEVTE EARRKAFTNRLPKVRAETEAIRKQEARAKRQS A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXX            D GELSVEDLPYRFLDEDKEPEEGINIYDV+GNIAAA+A             XXX                                                                                                                                                   ARRGAG PQAV VMGG  GG   GLDDAVVERMA+EAEEQ+EQM+EDDGVFDG ETGW
Sbjct:  575 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDPGCKDPADFLQAHGAEEFRAKVMGKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRRSGHYTGSWNAGVNAGSAPPAQGM----------------------KKREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQAQRFLLALVVHDPSRRAKCLEEVSRHGLYLGGERRQWLFNALTASVSPDPALPSAAGXXXXXXXXQDGAGRDSPP-AWGGPTPEALEAGGDVLFAEVRAAAPGGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEAERVAKGANTDLVLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDPPQASGEPPETATAPESPGVAAGKXXXXXXXXXXXXXXVERLKVRQSELFEMIQEQREEVTEFEARRKAFTNRLPKVRAETEAIRKQEARAKRQSMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPADTRYDERXXXXLQQLRREAGGE-DEGELSVEDLPYRFLDEDKEPEEGINIYDVDGNIAAAMAXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------------------------------------------------------------------------ARRGAGTPQAVTVMGG--GGXDGGLDDAVVERMAREAEEQMEQMNEDDGVFDGSETGW 1265          
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: A0A7S3Y9A4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A4_HETAK)

HSP 1 Score: 122 bits (307), Expect = 2.950e-27
Identity = 73/154 (47.40%), Postives = 103/154 (66.88%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNALRRR 154
            MD DAAG  AV  LC   AS  L +L+E GVSV VAT+  D+  KDPA+FL A  AEE+R+++++KA  WS+WYGD +L++++ A D  +FRR  + LT F++ L    D+TFH +RFAK LA GN +++ QLE DL++ +  K   K +L  R
Sbjct:  127 MDADAAGAGAVAGLC---ASGRLLALAEEGVSVKVATMAGDA--KDPAEFLIAQSAEEYRSQIIEKAQVWSEWYGDYLLSEYE-ADDPESFRRVVNSLTAFLATLPA-ADRTFHCYRFAKKLANGNVSLQVQLESDLIDQTQAKERIKQSLMER 273          
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: A0A835YIS2_9STRA (Toprim domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.120e-26
Identity = 70/141 (49.65%), Postives = 86/141 (60.99%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDS-GCKDPADFLQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNM 140
            MD DAAG +AVERLCE  A   L+  +  G+ V VA I   + GCKDP+DF+    A            PW+ WY D +LA HD  GDA AFR C D+LT F+S L+ P D+T HV+R A AL+G N A+R QLE DLM M
Sbjct:  357 MDADAAGAKAVERLCEGGA---LEEAAANGIEVRVADIAAAAPGCKDPSDFVAEAAAAXXXXAGKGGKAPWTVWYTDRVLAAHDHGGDAAAFRACVDKLTTFLSALADPADRTNHVYRVAAALSGDNLALRLQLEADLMAM 494          
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: B8CDX1_THAPS (Toprim domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDX1_THAPS)

HSP 1 Score: 81.3 bits (199), Expect = 5.710e-12
Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGA-----EEFRAKVMDKAVPWSDWYGDSILADHDFA---GDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKAL-----------AGGNEAMRHQLEFDLMNMSNEKRARKNALRRR 154
            MDGD AG+ AVER+C S   +    L+     + VAT+P++   KDP+DF+   G      E F  +VMD A PW DWY + IL+ ++     G   +F    D ++ F++  + P D+T  V+  A+ L           +     MR Q+E D++NM++ K + + ++ RR
Sbjct:  148 MDGDDAGKNAVERICSSNILTKTPELNRN--EIYVATLPDE--VKDPSDFVDYAGGGSKAKERFDIEVMDTAQPWDDWYVERILSRYNADAKDGADGSFSTLCDEVSSFLATFTNPADRTRRVYNIAEMLVDLIVKDSDRNSSSLGMMRVQMESDILNMASRKASVRESMERR 316          
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Match: B5IKU4_9CYAN (DNA primase n=4 Tax=unclassified Cyanobium TaxID=2627006 RepID=B5IKU4_9CYAN)

HSP 1 Score: 60.5 bits (145), Expect = 1.310e-5
Identity = 43/137 (31.39%), Postives = 67/137 (48.91%), Query Frame = 0
Query:    1 MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADFLQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTGFMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDL 137
             D D AG RA +R         L    E    + V  +P     KDP +FLQ HGA ++RA ++D+A  W DW  + +LA  D A  ++ F++    L   +  L     ++ ++ + A+ L+GG   +  QLE DL
Sbjct:  323 FDSDGAGVRAAQRAIGEVEQQALQGQLE----LRVLHLPAG---KDPDEFLQQHGAGDYRA-LLDQAPQWLDWQIEQVLAGKDLAR-SDQFQQAVSGLVALLGKLPQSAVRSHYLQQVAERLSGGQARLAIQLEDDL 450          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7753.18985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K157_9PHAE0.000e+080.13Toprim domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G3B8_ECTSI0.000e+070.83DNA primase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A7S3Y9A4_HETAK2.950e-2747.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YIS2_9STRA6.120e-2649.65Toprim domain-containing protein (Fragment) n=1 Ta... [more]
B8CDX1_THAPS5.710e-1232.37Toprim domain-containing protein n=1 Tax=Thalassio... [more]
B5IKU4_9CYAN1.310e-531.39DNA primase n=4 Tax=unclassified Cyanobium TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 480..528
NoneNo IPR availableCOILSCoilCoilcoord: 174..210
NoneNo IPR availableCOILSCoilCoilcoord: 832..852
NoneNo IPR availableGENE3D3.40.1360.10coord: 1..68
e-value: 5.6E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR30313DNA PRIMASEcoord: 1..430
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7753contigEcto-sp13_S_contig7753:44..5254 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7753.18985.1mRNA_Ecto-sp13_S_contig7753.18985.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7753 11..6462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7753.18985.1 ID=prot_Ecto-sp13_S_contig7753.18985.1|Name=mRNA_Ecto-sp13_S_contig7753.18985.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=864bp
MDGDAAGRRAVERLCESPASSGLDSLSEAGVSVSVATIPEDSGCKDPADF
LQAHGAEEFRAKVMDKAVPWSDWYGDSILADHDFAGDANAFRRCTDRLTG
FMSDLSIPTDQTFHVHRFAKALAGGNEAMRHQLEFDLMNMSNEKRARKNA
LRRRSGHYTGSWNAGVNAGSDPPAQGQQQSRQQQQQQQQQQQQQQQLRMK
KREESRLKREKYGSKRMTIWSPSMEQEYGGGSEESKATELALRGRILDQA
QRFLLALVVHDPSRRAKCSEEVSRHGLYLGGERRQWLFNALTASVSPDPA
LPSAVAGRGGGDGQDGVGRDSTHAAWGGPTQEALEAGGDVLFAEVRAAAP
GGYFALRGKAAGKGGGGVGADDEGEKEDTLDWVFERAEANRVAKGANTDL
VLLEVVMVMLKEQAAAKMHSLSLELADTSNAIARTMAEAATADFLALDSP
LASADPPKTAAAPEPPGVAVGKGQGVGRSRAEAQAEVERLKVRQSELFEM
IQEQREEVTELEARRKAFTNRLPKVRAETEAIRKQEARAKRQSSAVAAPA
ARSAAPSPRPPPPTSPPPPPPPAAERSQSPADTRYDERRQQQLQQLRREA
GGGDGGELSVEDLPYRFLDEDKEPEEGINIYDVEGNIAAAVAAMEAAEAG
DAALPPPLPPTPPPLQQQQQQLHRPRQQHPQQQGQDQHKPQFSSDATHRQ
AVAREARRRDAAEGVVAAAPSAPSAPGGAAAAAAAAVGASWPAPVAGRLG
NNRDDDQRPGVEVGATGTVRDTATTTSPPSLSGRHPAAGGSHAGEAGKGA
RSEWNARRGAGAPQAVAVMGGARGGGGRGLDDAVVERMAKEAEEQIEQMS
EDDGVFDGCETGW*
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