mRNA_Ecto-sp13_S_contig7751.18984.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7751.18984.1
Unique NamemRNA_Ecto-sp13_S_contig7751.18984.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: D7G616_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G616_ECTSI)

HSP 1 Score: 692 bits (1785), Expect = 1.210e-239
Identity = 431/456 (94.52%), Postives = 436/456 (95.61%), Query Frame = 3 
Query:   33 MAITVDDEEGVELAELSLNDDGQSDGXXXXXXXXXXXXXXXXXXXXXXXXXXRAKXXXXXARKRETQSTLLRRHLRLLWKTLCGLLCLGTAVSAAVTLVAAIELRRHLGRSFFALPLAVHLLLDALLALIPLLVARGDGXXXXXXXXXTSQVEFQRQLRAGRTIAQARRXXXXXXXXXXXXXXXXFRLGLSRRTSAALALAYSLVDAAWCAAFAVAVLAAAWAIAVEADGTVAPEWRGMHAALTAAAVLSGVASGVRVLAAIAIGAYLRSRSRLVHVLRNTDEPPWHYTMSPKMQRLAIRQATLLFAGSCLLVAISAGSYILCLTVDTESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            MAITVDDEEGVELAELSLNDDG SDG  XXXXXXXXXXXXXXXXXXXXXXX RAK XXXXARKRETQS LLRRHLRLLWKTLCGLLCLG  VSAAVTLVAAIELRRHLGRSFFALPLAVHLLLDALLALIPLLVARGDGXXXXXXX  TSQVEFQRQLRAGRTIAQARRXXXXXXXXXXXXXXXXFRLGLSRRTSAALALAYSLVDAAWCAAFAVAVL AAWAIAVEADGTVAPEWRGMHAALTAA VLSGVASGVRVLAAIAIGAYLRSRSRLV+VLRNTDEPPWHYTM PKMQRLAIRQATLLFAGSCLLVAI AGSYILCLTVDTESA+HYDHCDPLDTTLCALPFPSSFFLEEDVSESSSS+   A RGTGYRVSFGPKSLPYTRGR+NVSPDSVNAYDGFSTLAPILFYLEGMS SGFAGPGDIGASLHANSTTWLIDADTG MVPHFAE+
Sbjct:    1 MAITVDDEEGVELAELSLNDDGHSDGGEXXXXXXXXXXXXXXXXXXXXXXXVRAKRXXXXARKRETQSALLRRHLRLLWKTLCGLLCLGAVVSAAVTLVAAIELRRHLGRSFFALPLAVHLLLDALLALIPLLVARGDGXXXXXXXGPTSQVEFQRQLRAGRTIAQARRXXXXXXXXXXXXXXXXFRLGLSRRTSAALALAYSLVDAAWCAAFAVAVLVAAWAIAVEADGTVAPEWRGMHAALTAAVVLSGVASGVRVLAAIAIGAYLRSRSRLVYVLRNTDEPPWHYTMPPKMQRLAIRQATLLFAGSCLLVAIGAGSYILCLTVDTESAEHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSAM--AARGTGYRVSFGPKSLPYTRGRINVSPDSVNAYDGFSTLAPILFYLEGMSASGFAGPGDIGASLHANSTTWLIDADTGGMVPHFAEL 454
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A7S2JYH0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JYH0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.120e-21
Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 3 
Query:  945 LFAGSCLLVAISAGSYILCLTVDTESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYL--------EGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            LF    LL A  + S    +  D  +  +  +CDPLD T C LPFPSSF+L ED           A+  TGYRV     +LP  +G +   P  +N  DGFSTLAPILFY+        +G+ GS   GP  IG S+ + S T L+D ++  +VPHFAE+
Sbjct:   79 LFGLFMLLTASLSSSLAYLVAWDVPAPLNISNCDPLDHTECILPFPSSFYLRED-----------ASTVTGYRVHLTSDTLPL-KGSLPFVPGYLNQMDGFSTLAPILFYVHGLKEGGGKGLDGSELQGPESIGLSVTSKSITLLVDVESRSLVPHFAEL 226
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A835Z5S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.400e-19
Identity = 99/288 (34.38%), Postives = 126/288 (43.75%), Query Frame = 3 
Query:  603 SRRTSAA---LALAYSLVDAAWCAAFAVAVLAAAWAIAVEADGTVAPEWRGMHAALTAAAVLSGVASGVRVLAAIAIGAYLRSRSRLVHVLRNTDEPPWHYTMSPKM-------QRLAIRQATLLFAGS--------CLLVAISAGSYILCLTVDTESAQHYDH----CDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            +RR  AA   LAL Y+   AA   + A  ++AA W + VE DG V PE   +H  LTA A L                 +L +R+RL    R             +        QR+ +R+A   +A +         L  A             T   Q  D+    C+PLD TLCALP+PSS +L  D           A   TG RV     +LP T+    VS   +NA DGFSTL   LFYL+GM G G   P +I ASL    TT L+ A TGE V HF E+
Sbjct:  152 ARRCRAATPWLALLYAAASAALMLSAADIIVAARWFLTVEPDGRVVPESCALHWGLTAVAALLRAXXXXXXXXXXXXXXHLWARARLRAAARAAPPDDERCLEGERCEGGDVMAQRVRLREAAAQWAAAHLRRAACAALATAXXXXXXXAASLTGTVLLQRGDNGITGCNPLDGTLCALPWPSSAYLVPD-----------AATPTGVRVRMPRGALPATQRGRRVSAARLNAMDGFSTLGAALFYLDGMGGLGLPTPRNIAASLECR-TTCLVRAATGERVAHFTEL 427
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A7S1ZFM9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZFM9_TRICV)

HSP 1 Score: 100 bits (248), Expect = 1.410e-19
Identity = 84/255 (32.94%), Postives = 111/255 (43.53%), Query Frame = 3 
Query:  717 DGTVAPEWRGMHAALTAAAVLSGVASGVRVLAAIAIGAYLRSRSRLVHVLRNTDEPP-------------WHYTMSPKMQRLAIRQATLLFAGSCLLVAI---SAGSYILC--LTVDTESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYT-RGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSG--------FAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            DGTVA EW  +      A + S VAS + +   +     LR   R    LR   E               +    S K  RL      L  A +   +A+   SAG+++L    T  +  +     CDP+D T C  PFPS+FF   D            T  TG RV    ++L    +G   V P  +N  DGFSTLAP LFYLEG+   G          GP  I AS+ + S T L+D +  E+VPHFAE+
Sbjct:   23 DGTVAVEWSDLERTARIATIWSVVASALDLAVFVLAALLLREDCRRQRDLRKRREGDGERPSRVGLSRSRYESLRSRKFIRLHRTLGILALAAAAAFLAVCSESAGTFLLGDGSTAASVRSTVGPECDPMDDTECLFPFPSNFFTRAD-----------NTTATGLRVDIPVEALSTLYKGNGPVHPSFLNEMDGFSTLAPALFYLEGLKEGGGLGHGGKFLPGPDRIDASVTSRSVTALVDVERAELVPHFAEI 266
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A3M1D2Y5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1D2Y5_9DELT)

HSP 1 Score: 101 bits (252), Expect = 2.920e-19
Identity = 64/152 (42.11%), Postives = 80/152 (52.63%), Query Frame = 3 
Query:  942 LLFAGSCLLVAISAGSYILCLTVDTESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAE 1397
            LL A +CLL      +    L  DT        C+P+D  LCALPFPSSF+LEED               TG RV+F   SLP +R  + V P   N +DGFS  +P+LF+  G S +G     DIGA L  ++ T +ID  TGE VPHF E
Sbjct:    2 LLLALTCLLACRPDPAADSGLPGDTGVLPDRGACNPVDPALCALPFPSSFYLEEDEGTE-----------TGRRVAFDAASLPVSRDGVGVDPWPWNEHDGFSVNSPLLFFFLGASTTGTITKDDIGAYLDPDARTVIIDTTTGERVPHFVE 142
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A7S2PCY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCY1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 8.420e-19
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 3 
Query: 1011 DTESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMS---GSGFAGPGDIGASLHANSTTWLIDAD 1367
            D+    H + CD LD T C LPFPSS+FL ED S             TGYRV+    +L   +G  +++P  +N  DGFST++PILFYL+G+    G G  GP +IG S+ A S T L+D +
Sbjct:   19 DSAIEVHGEQCDMLDETECMLPFPSSYFLREDESSE-----------TGYRVNLDSNTLFKLKGSESMNPGFLNNMDGFSTMSPILFYLDGLKEGGGVGLQGPDNIGDSITAKSITLLMDVE 129
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A1Z5JS84_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS84_FISSO)

HSP 1 Score: 92.8 bits (229), Expect = 2.820e-16
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 3 
Query:  708 VEADGTVAPEWRGMHAALTAAAVLSGVASGVRVLAAIAIGAYLRSRSRLVHVLRNTDEPPWHYTMSPKMQRLAIRQATLLFAGSCLLVAISAGSY-ILCLTVD-------TESAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPG------DIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            +E DGT   EW          A  S V   +R + A AIG   R +    +++    +PP     S K  R+      + FAG  +++A    S+ I  + V         ++A   + CDP+D T C LPFPS F L  D            T  TG+RV+    SLP  RG +++  +  N  DGFST+ PILFY++G+  +  AG        +I  S+   S T+L+D     +VPH AE+
Sbjct:  149 IEPDGTDVIEWSNYKRLFEVFAFNSWVFFILRTIVA-AIGCLARLQIERPYLVVQCIKPPICSLPSEKEYRMRSSVQRISFAG--IIIATFFSSWCIFSVAVHFLPPFSLRQNAYANEFCDPIDETECILPFPSFFHLRPD-----------ETSETGWRVNLQEASLPLLRGGISMHAEFYNELDGFSTMGPILFYIDGLKEAHEAGAKQLKGQREIAKSVTQESVTFLVDVKAAALVPHSAEI 379
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A4P5VVU7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5VVU7_9DELT)

HSP 1 Score: 89.0 bits (219), Expect = 3.860e-15
Identity = 52/130 (40.00%), Postives = 68/130 (52.31%), Query Frame = 3 
Query: 1020 SAQHYDHCDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTR-GRMNVSPDSV--NAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            S   +  CDP+    CA PFPSSF+L +D           AT  TG RV  G  ++PYT+ G ++  PD    N  DGFS + P++  + GMS     G   IGASL   S   L+D DTGE  P +AE+
Sbjct:   20 SPTEFSDCDPIAYERCATPFPSSFYLRDD-----------ATSPTGVRVHLGATTIPYTQQGDLSYQPDPKYWNELDGFSPMGPLIVEIPGMSADNLPGHASIGASLEDGSALVLLDWDTGERFPAWAEL 138
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A2E2NU48_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E2NU48_9DELT)

HSP 1 Score: 88.6 bits (218), Expect = 5.100e-15
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3 
Query: 1041 CDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            CDP+  TLC LPFPS+F + E           S T  TG++V+FG ++LP     +   P  +N  DGFS L P + +L G +  G     DI    + ++ T +++ +TGE VPHFAEV
Sbjct:   32 CDPIAPTLCGLPFPSTFHMVE-----------SETSATGWQVNFGEETLPRNYNLVQTQPTYINEKDGFSPLTPAIAHLPGATADGLISXLDISTYANXDAKTVILNINTGERVPHFAEV 140
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BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Match: A0A7V8YC35_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V8YC35_9DELT)

HSP 1 Score: 87.8 bits (216), Expect = 9.110e-15
Identity = 48/120 (40.00%), Postives = 69/120 (57.50%), Query Frame = 3 
Query: 1041 CDPLDTTLCALPFPSSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVNAYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMVPHFAEV 1400
            CDP+D +LCALP+PSS+F               A   +G + +F  +SLP  R  + ++PD +N YDGFST+ P + YLE +S  G     +  A L  ++ T  IDA+TGE +PHF E+
Sbjct:   31 CDPVDPSLCALPYPSSYFQ------------VPADTVSGVQNAFPAESLPINRDSVRLAPDLLNRYDGFSTITPAVTYLEAVSLDGAIAWTEPDAYLAPDARTVWIDAETGERLPHFVEL 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7751.18984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G616_ECTSI1.210e-23994.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2JYH0_9STRA1.120e-2140.63Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
A0A835Z5S3_9STRA1.400e-1934.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ZFM9_TRICV1.410e-1932.94Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A3M1D2Y5_9DELT2.920e-1942.11Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A7S2PCY1_9STRA8.420e-1942.62Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1Z5JS84_FISSO2.820e-1631.43Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A4P5VVU7_9DELT3.860e-1540.00Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2E2NU48_9DELT5.100e-1538.33Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A7V8YC35_9DELT9.110e-1540.00Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7751contigEcto-sp13_S_contig7751:339..6342 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score690.6
Seed ortholog evalue4.8e-196
Seed eggNOG ortholog2880.D7G616
Model size1400
Hectar predicted targeting categorysignal anchor
Exons8
EggNOG OGs296UM@1,2RDTX@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-11_004740.1
Cds size1368
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7751.18984.1prot_Ecto-sp13_S_contig7751.18984.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7751 339..6310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464044.8210168-CDS-Ecto-sp13_S_contig7751:338..4581681464044.8210168-CDS-Ecto-sp13_S_contig7751:338..458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 339..458 -
1681464044.83842-CDS-Ecto-sp13_S_contig7751:1072..13321681464044.83842-CDS-Ecto-sp13_S_contig7751:1072..1332Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 1073..1332 -
1681464044.8524013-CDS-Ecto-sp13_S_contig7751:1942..21231681464044.8524013-CDS-Ecto-sp13_S_contig7751:1942..2123Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 1943..2123 -
1681464044.8652892-CDS-Ecto-sp13_S_contig7751:2822..29361681464044.8652892-CDS-Ecto-sp13_S_contig7751:2822..2936Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 2823..2936 -
1681464044.881434-CDS-Ecto-sp13_S_contig7751:3161..34011681464044.881434-CDS-Ecto-sp13_S_contig7751:3161..3401Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 3162..3401 -
1681464044.9633465-CDS-Ecto-sp13_S_contig7751:3789..40511681464044.9633465-CDS-Ecto-sp13_S_contig7751:3789..4051Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 3790..4051 -
1681464044.9810727-CDS-Ecto-sp13_S_contig7751:5079..52161681464044.9810727-CDS-Ecto-sp13_S_contig7751:5079..5216Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 5080..5216 -
1681464044.9936404-CDS-Ecto-sp13_S_contig7751:6256..63101681464044.9936404-CDS-Ecto-sp13_S_contig7751:6256..6310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7751 6257..6310 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464045.0049505-UTR-Ecto-sp13_S_contig7751:6310..63421681464045.0049505-UTR-Ecto-sp13_S_contig7751:6310..6342Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7751 6311..6342 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7751.18984.1

>prot_Ecto-sp13_S_contig7751.18984.1 ID=prot_Ecto-sp13_S_contig7751.18984.1|Name=mRNA_Ecto-sp13_S_contig7751.18984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=456bp
MAITVDDEEGVELAELSLNDDGQSDGGEERRREGGGEGEEDQAPLLAADD
DVRAKRRARRARKRETQSTLLRRHLRLLWKTLCGLLCLGTAVSAAVTLVA
AIELRRHLGRSFFALPLAVHLLLDALLALIPLLVARGDGEGEPPPPVPTS
QVEFQRQLRAGRTIAQARRRPEEDDEACGGGAACCFRLGLSRRTSAALAL
AYSLVDAAWCAAFAVAVLAAAWAIAVEADGTVAPEWRGMHAALTAAAVLS
GVASGVRVLAAIAIGAYLRSRSRLVHVLRNTDEPPWHYTMSPKMQRLAIR
QATLLFAGSCLLVAISAGSYILCLTVDTESAQHYDHCDPLDTTLCALPFP
SSFFLEEDVSESSSSSATSATRGTGYRVSFGPKSLPYTRGRMNVSPDSVN
AYDGFSTLAPILFYLEGMSGSGFAGPGDIGASLHANSTTWLIDADTGEMV
PHFAEV
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mRNA from alignment at Ecto-sp13_S_contig7751:339..6342-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7751.18984.1 ID=mRNA_Ecto-sp13_S_contig7751.18984.1|Name=mRNA_Ecto-sp13_S_contig7751.18984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6004bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7751:339..6342- (Ectocarpus species13 EcNAP12_S_4_19m)
GCAGCGCTGCCCGTGATGACCACAACGGAGCCATGGCCATAACGGTAGAC
GACGAGGAAGGCGTCGAGCTCGCAGAATTATCCCTGGTGAGACACAGCAG
TGCAGCTCGTTCGTGCTCTCGGTCGATTGGATGGGATCGTATCCACGTAC
ATGCAGTAGTGTGTGAGATGTTCTTGCCCTCTCTCTCGTCTCCCCTCTCC
GCGACTTTTGTACACGCCGAGAGCTACTGCTATAGCTGTTAGGTACCGAC
CACGCCTCCATCTGATAACACTTGAGCTGGCAGGGGAATCCCCCGAGATG
GCTAGCTGTGTCGGCTGCTGCATGGTAACACCTGTCGGGATGTGCACAAC
AACCACAAACCTGCGTGCAATACAAAGGCTTTTTCGAGCATGTGAGTTGT
TCCGCATCCAATGTGTGTCAATACAAGACCCGCTGTACCAAACTCAAAGG
TGTTTGCCCCATTTTTTTCAAAGAGAATGTCAGTGCCAAACTGCACATAT
TCTGAATACCATCGACAGTGTTTTTTCATCATCGCCATGCGCTAACGCCG
GCAACTCTTCTCCGGTGGAGCTACCGTGATTGGGGGACTGATGTTTACCG
TCACACACGGGGGTAGCACGACTCAAAACAAATCAACCGTGCGCTGGGCG
CCGCTAGGGTATTGCATGGCACTTCCTGCCGTCAATTACGTCTTCCGTTG
TCTGCGTTGTCGGGTAAACAAACGGTAGCTTGTCTCCTGAACGCGCCAGT
CCGATGCGCGGGTTTGGTGGCGTTGTATGCCAGCCAGCAGTCTCCCACCG
ACCCGGTGGTGCTGCCATGCCTTGCTCTTTTTTTGCCTCTACCAGCAGTC
TCGCACCGACCCGGTGGTGCTGCCATGCCTGGCTCTATTTTTGCCTCTCT
TTCTGTCTCTCTATCCGTCTCTCTATCCGTCTCTCTATCCGTCTCTCTTT
ATCTTCAACCGCTTGTCTTTCTGTGTGTTTGTCTCTCTCTGTTTGTCCTC
CCCTGTTGAAATGGATGAGTTTTTCTGTCGGCCATGTACTACGGCGAGAG
TCAAGCTCAATCGCCCTCATCTCACGACGCCCTATAACGCACCTCCCACA
CATGCGTTGACCCCCTCCCCCCTTAGAACGACGACGGACAGAGCGATGGT
GGGGAGGAGAGACGAAGAGAAGGAGGAGGAGAGGGAGAAGAAGACCAGGC
TCCTTTGCTGGCAGCCGACGATGATGTTCGAGCTAAGAGGAGAGCCAGAC
GGGCCAGGAAGCGGTGAGTTTCCAAACACGAAGAAGAGGTGGTTGCGTGA
CGCCACAAAGAGAGAGGAATAGAGAAAAACAGAGAGAGAGGCACAGACAG
AGACAGACAAATAGATAGATGGACAGATAGACAGACAGGGCGAGACAGGC
TTGCCGCCCCGCCACCCTGTTCACTTCCTGCATCAGGAAGGCTGGTGTCT
CAACAGCTAAAAAAAATGCTTTGCACGTATGTAGACAGAAATAGAGCGGG
GTCTGGGATGTGGCAGCTTAGACTCGAGCCAGGCAGCATGGCGAGTCGCC
TCGGAAAGAATTTATTTACATTTTTTGTACCTCCTGTTCTGGTCACTTTC
CTGCTCTGTGACGATTGGCGCGTTCGTTCGCAAGACAACATCCAAGCGAG
CTCGCCGCCCGGCAGATGCATTATCGTACCAGCAGCTTTGGTGGTCTGAA
TTTTCGCCCCCGCAACACCCTCTCTCCCCAGGGGTAACTGGTATCACTGC
TTGGTTCGTCCGCAAACAGCAAATGCAGCAGCAGCGTAGCAACCTTCGAT
TTCCGCCCAATGATTGGGATACACATGTTTGACCTATGTCACCTCAAGCA
CCTCCTACTGTAGTGCTGTGCCAGCATGTTGCTTTCGCACTGGGTTTGTC
CCCCCCCCCCCTCTCGGCCAACCTCAAGGTAGTTAAGGTATACCACCCGG
GAGAATAGTGGCATACCACTCGGTAGAATAGTCTGGCCGCTCTTTCGGCA
ATGCTTGCTACTCCTGTAGAATCCAGGTGCGCAGCGGTTTCTCCACCCGG
AGCAGAGGTAGCAGCACTTTCACCCAGATTAGCCAACGCAGCCCAGCACA
CAAGAGCGTATTTGTCACTCACCGGTCTATCTGAATTTTTTCCTAGGCAA
CGAAGCATCCGAGCACAGCACTGACTTTGCTCCCACGCACTAAAACATTC
GACACCCGATCTCAAGAGCACAAAACGACATCCATCTGCATAACCCATCG
GTTCGCATGCATTCGGTGCAAATTTTGTTTTTCGAGCGCAGCGAGACGCA
ATCGACCCTGCTCCGGCGACACCTGCGACTCCTGTGGAAAACCCTGTGCG
GGTTGCTGTGCCTCGGCACCGCCGTCTCCGCCGCCGTGACCCTGGTGGCA
GCGATCGAGCTGCGCCGACACCTGGGCAGATCCTTCTTCGCGCTGCCGCT
GGCCGTGCACCTGCTGCTGGACGCCCTGCTCGCGCTGATCCCGCTCCTGG
TGGCAAGGGGGGACGGGGAAGGGGAGCCCCCCCCCCCGGTTCCTACTTCT
CAGGTGCGCTTTTTTGTAAGCGACCAACGCACACACAGTACAGTGACGAT
GAAGAAAAACTGCGGACCAGGTGCCCTTTGAGATAAAAAGTGTGCTTGGA
TCTGTGTTGTGAGCATCGACCGCGCTTGTGTACGTGCCTGTGCGTGCGTA
TGCGTGTGCTTTTTTTTTTCTCGACGCGGTGGAGAAAACGTTGTTCGGTC
AGCCAGTAGGCATGGGTCTCTGCCCGAACGCACGCACGGCAGCACCCCTG
CCAACGAATCAAAAAGTCGAAAACAACGACAACAATTGAGCAAAAGGGGG
GCATCATTGCAGAGGCCTGCTACATACACCCAAAATTTTAAAAAAATCGT
GCTCATCTCCAGAGCGTGTCCGTTCCAATCCCCGAACACAGGTGGAGTTC
CAGCGGCAGCTGCGGGCGGGTCGGACCATCGCCCAGGCCCGGCGGCGGCC
GGAGGAAGACGACGAGGCCTGCGGCGGCGGCGCCGCCTGCTGCTTCCGGC
TCGGGCTGTCTCGGCGGACCTCGGCCGCTCTTGCGCTCGCGTACAGCCTG
GTCGACGCTGCCTGGTGCGCCGCCTTCGCCGTGGCCGTGTTGGCGGCTGC
GTGGGCCATCGCGGTGGAGGCGGACGGCACGGTGCGTGTCATTCACACTG
CGGTGCCCCCGCGTGTATGGAGGGGTTAGCATGGTCTTGTTTTGTTTTAT
GTCAAACGGTGGGTGCTCAGCGCGACAGTCTAGAGATGAAGAGAGTCTTG
GTCGTGGTTGGTACAACGGAGTCATGGTAAATCAAGACATGCCCAATGGT
GCTTCGTGTACATACATCTATATATCTCCCGTTGTTTCGTGTTTTTTCCC
ATGAAGGTGGCCCCCGAATGGCGGGGCATGCACGCCGCCCTGACCGCGGC
GGCCGTCTTGAGCGGGGTCGCGTCGGGCGTCAGAGTGCTAGCGGCGATCG
CGATCGGGGCCTATCTGAGGGTGAGCGCATTTCTGGGCTGAAGCTATCTA
GCGCCGTTTTGGTAACTTCCTTTTGATGGAGGGCCACATTAGAAGTAATA
TGTACTTTTACGTACATGTGCCAAACATGCTCCTTCACTTTTTCCCAACA
TGCTCCTTCACATTTTTTTGTCTCTTACTATGTAACACAACGAATGCATC
CATAGATAAGAGTCTAGGACAAACTTTGGCAACAGCGGTAAGAGGTGCTG
TCTTTCTTGTCGATTATTCAAGGCTCCATTCATTCGAAGGGAGCCACTGC
GGCTCGACCGTTGCAACTGCACAGTTTCATGTCTGGGTGGCGCCAGGCAC
AAGGATCGGGGCGTGGGGGGAGATCGGGGTGCCGGGTCGCAGAAAGGCCT
TCTGGTACGTTGCGTCTGTGCTGCCCTTGTTTAGGCTGTTGTGTCGTTGT
TTTGAGGGCTGCATGGTCCTACACGTGATTGATCCTCTTGTTGTTTCCTG
GTACATCCACCCCACTTTTTTGTTCGCAACTCCGCCCTTCCCTTTGGAAG
TGAACGTAATCAGAATCCGTGTCGGCATGTGATGCTTCAGCACACGACAA
AAAACTAGCGGCCAGCAAGTCACTGGAGAGTTTTTTGTCTGTCGGATCCC
GCAAACTCTCTCCGCTTTCGAAAGACAGGCAACCCATTCACCGCGTCCCC
TCCTTTCCCTCGCCGCCAGTCCCGATCGCGCCTGGTGCACGTGCTCCGCA
ACACCGACGAGCCCCCCTGGCACTACACCATGTCGCCGAAGATGCAGCGG
CTGGCCATCCGGCAGGCAACGCTGCTGTTCGCGGGATCCTGCCTGCTCGT
GGCCATCAGTGCGGGCAGCTACATCCTCTGCTTGACGGTCGACACCGAAA
GTGAGCGTGTGGCGGTGGTGTTAGGAGGCGTTTGACGGGTGTGTGTGTGT
GCCATAAGTAGGGCACACGCCGTGGTGGTGGTGGTGGTGTTGGGGGGCGT
TGTGATGGGCACGTGGATGGGAGTGAGCGTGGTGCGCCGTCGAGTAGAGC
ACCCGCTCTGGTTGTGGTCGTTTTGGGGAGGGGTCGTGACGGCGGCCATG
TGGATACCCCCCCGACGGGGAAAGTAACCGCCTAACGGTGGCGGACAAAG
AAGACGTTCTTGTTCTTCTTCCCAAGACGAGGTGAAGTGTTCTCGGTGCC
CACGCGCTTTGTTTCTTAAAATTTGTCGGTGGCTTCTTCTCTTTTTGCTG
TGGTTCTTGTATTGTTCTTGCTTGTTGCCCTTCTAGTGACCGCCGCCACG
GCCACCGCCGCTGGTGGCTCCCACGCCGTAAAGTTGCCGACTGCCGCACC
TCTCATCACGGCACTTTGGTCGTCATGTACGGGTGCTAGCCTCCTCCTCT
CCCTTTTGTCAACGCGCTTCTCCTTAATGAGCAGGCAGAACCGAAGATAC
GGCGCCCCTGAAACCTTCTCTTTTTCACCCCCCTCTATCCGGTTCATGTA
CCGAAAGCAGGTGCCCAACACTACGACCACTGCGACCCGCTCGACACCAC
CCTATGCGCCCTGCCCTTCCCATCCTCCTTTTTCTTGGAGGAGGATGTGT
CGGAATCGTCATCGTCGTCGGCGACGTCGGCGACGAGAGGGACGGGGTAC
AGAGTATCCTTCGGGCCCAAGAGCTTGCCGTACACCCGGGGACGGATGAA
CGTGTCCCCGGATTCGGTTAACGCATACGACGGTTTCTCGACGCTAGCAC
CCATCTTGTTTTACCTCGAGGTGCGTGAAGAGGACGGGTGTACGTGGTCA
AAGGGAGAATGCGTTGTTGTCTGCGGCTCATTGAGATTCCAAGCATGCAC
TGCCCCCTCCACCGTGGGACAGACGGGTCGCGCTGTTCGCGGGCATCAAC
CACGAAGGACGAAGGGTATATCCCCAGGGGCGTCGAAGCTATCTTGTCTC
GGAATCGTGTGGCTTTCGGTCCTCAATTTCTCGAGAACGCTGAGGATACT
GGTACTGAAAAATAAACTGTCTCTAGTCATTTTTTACGCGTGGCGAACAA
ACCTCTGCAAGAGAGTGGTAGAGATTGGGCCGCGTTTGTCACCCACACCC
CCGGTCTTGTCCCGGAGCAAGCAATACCGAGCGGCACCATCGCCCTCCAA
TAAACCTCGTCCCACCCTGAAGAACGTCGTCCTCGTTTCATTGGTGCTGT
CCGATGACCAACTTTCCCAAATTTGAAGCTACTGTAATTGGTCCGTCGGT
CGGTCCTCCCGAAGCTCGTCCTATTTTTGGGGGCTGCTGCGCCCGAGTAG
CTTCCCCGAAATCTACGAAATGTTTTGTGCCGGCCGCATCTAAGCGAACC
TAATCGTTCGGGTGGCGTCGAACAATGCTGACAGGGAATGTCGGGGAGCG
GGTTCGCCGGTCCCGGGGACATCGGGGCCTCCCTGCACGCCAACTCCACC
ACCTGGCTCATCGACGCCGACACGGGCGAGATGGTCCCGCACTTCGCCGA
GGTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7751:339..6342-

>mRNA_Ecto-sp13_S_contig7751.18984.1 ID=mRNA_Ecto-sp13_S_contig7751.18984.1|Name=mRNA_Ecto-sp13_S_contig7751.18984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1368bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7751:339..6342- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCATAACGGTAGACGACGAGGAAGGCGTCGAGCTCGCAGAATTATC
CCTGAACGACGACGGACAGAGCGATGGTGGGGAGGAGAGACGAAGAGAAG
GAGGAGGAGAGGGAGAAGAAGACCAGGCTCCTTTGCTGGCAGCCGACGAT
GATGTTCGAGCTAAGAGGAGAGCCAGACGGGCCAGGAAGCGCGAGACGCA
ATCGACCCTGCTCCGGCGACACCTGCGACTCCTGTGGAAAACCCTGTGCG
GGTTGCTGTGCCTCGGCACCGCCGTCTCCGCCGCCGTGACCCTGGTGGCA
GCGATCGAGCTGCGCCGACACCTGGGCAGATCCTTCTTCGCGCTGCCGCT
GGCCGTGCACCTGCTGCTGGACGCCCTGCTCGCGCTGATCCCGCTCCTGG
TGGCAAGGGGGGACGGGGAAGGGGAGCCCCCCCCCCCGGTTCCTACTTCT
CAGGTGGAGTTCCAGCGGCAGCTGCGGGCGGGTCGGACCATCGCCCAGGC
CCGGCGGCGGCCGGAGGAAGACGACGAGGCCTGCGGCGGCGGCGCCGCCT
GCTGCTTCCGGCTCGGGCTGTCTCGGCGGACCTCGGCCGCTCTTGCGCTC
GCGTACAGCCTGGTCGACGCTGCCTGGTGCGCCGCCTTCGCCGTGGCCGT
GTTGGCGGCTGCGTGGGCCATCGCGGTGGAGGCGGACGGCACGGTGGCCC
CCGAATGGCGGGGCATGCACGCCGCCCTGACCGCGGCGGCCGTCTTGAGC
GGGGTCGCGTCGGGCGTCAGAGTGCTAGCGGCGATCGCGATCGGGGCCTA
TCTGAGGTCCCGATCGCGCCTGGTGCACGTGCTCCGCAACACCGACGAGC
CCCCCTGGCACTACACCATGTCGCCGAAGATGCAGCGGCTGGCCATCCGG
CAGGCAACGCTGCTGTTCGCGGGATCCTGCCTGCTCGTGGCCATCAGTGC
GGGCAGCTACATCCTCTGCTTGACGGTCGACACCGAAAGTGCCCAACACT
ACGACCACTGCGACCCGCTCGACACCACCCTATGCGCCCTGCCCTTCCCA
TCCTCCTTTTTCTTGGAGGAGGATGTGTCGGAATCGTCATCGTCGTCGGC
GACGTCGGCGACGAGAGGGACGGGGTACAGAGTATCCTTCGGGCCCAAGA
GCTTGCCGTACACCCGGGGACGGATGAACGTGTCCCCGGATTCGGTTAAC
GCATACGACGGTTTCTCGACGCTAGCACCCATCTTGTTTTACCTCGAGGG
AATGTCGGGGAGCGGGTTCGCCGGTCCCGGGGACATCGGGGCCTCCCTGC
ACGCCAACTCCACCACCTGGCTCATCGACGCCGACACGGGCGAGATGGTC
CCGCACTTCGCCGAGGTT
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