mRNA_Ecto-sp13_S_contig12260.1898.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig12260.1898.1
Unique Name	mRNA_Ecto-sp13_S_contig12260.1898.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: A0A6H5JTN9_9PHAE (MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN9_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 3.450e-114
Identity = 173/186 (93.01%), Postives = 178/186 (95.70%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVR SVGCADNVFSENTISNNSKYNAY+YLGSDEPDVVSSGRSQNNVFSQN F GA ETIKIKEADGTQFLDNVFE+GDADGLVVRFDDA  ++MKGNTGLDDGEFELKV NDSCFD ESDSGYEP+C
Sbjct:    7 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRFSVGCADNVFSENTISNNSKYNAYSYLGSDEPDVVSSGRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVFEVGDADGLVVRFDDATGNLMKGNTGLDDGEFELKVTNDSCFDEESDSGYEPLC 192

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 7.820e-113
Identity = 176/186 (94.62%), Postives = 183/186 (98.39%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVS+NTFENNKYGVRMSVGCADNVFSEN ISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQN F+GAEETIKIKEADGTQFLDNVFE+GDADGLVVRFDDAMNS+M+GNTGLD+G+FELKV NDSCFDGESDSGYEPVC
Sbjct:  327 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 5.940e-107
Identity = 167/186 (89.78%), Postives = 180/186 (96.77%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVS+NTFENNKYGVR SVGCADNVFS NTISNN++YNAY+YLG+DEPDVVSSGRSQNNVFSQN F+GAEETIKIKEADGTQFLDNVFE+GDADGLVVRFD+A  ++M+GNTGLDDGEFELKV ND+CFDGE+DSGYEPVC
Sbjct:  323 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.150e-72
Identity = 121/185 (65.41%), Postives = 148/185 (80.00%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPV 555
            GNEVYGGA +SAGIFL+RSSDDA+VKGNYVHDNGDAGLAM+ESFNADVSDN FENNKYGVR+SVGC  N+FS+N IS ++KYNAY+YLG+D PDVV SGRS++N F +N   G  ET+KI +ADGT+F+ N FE    D + +RFDDA  ++M GNTGL D +  LKV N + FD  +D G+EP+
Sbjct:   87 GNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFE----DAVTIRFDDAARTVMSGNTGLTDTK--LKVHNGASFDKRADYGFEPI 265

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.400e-66
Identity = 118/185 (63.78%), Postives = 145/185 (78.38%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPV 555
            GNEVYGG+  SAGIFLHRSSD+ IVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVR+SVGC  N+FS+N I+ ++++N ++YLG+D+P+VV SGRSQ+NVF +N   G  E+I +KEADGTQF+DN F+    D   +RF DA  ++M GNTGL D    LKV   + FD  SD G+EP+
Sbjct:  294 GNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFK----DAAAIRFVDATKTLMSGNTGLADST--LKVDRGATFDESSDHGFEPI 472

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.390e-66
Identity = 116/180 (64.44%), Postives = 141/180 (78.33%), Query Frame = 1

Query:   19 GAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            G+  S GIFLHRSSDDAIVK NY  DNGDAG+A++ESFNADVS+N FE+NKYGVRMSVGCADNVFS+N IS++S+YN YTY GSD+P VV SGRSQ+N+FS N  TG +E+IK+  ADGT+F+DN F+        VRF+DA ++IM GNTGL  G   LKV   +CFD +SDS Y+PVC
Sbjct:  152 GSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFK----SAKTVRFEDAQDTIMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 325

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.040e-60
Identity = 112/180 (62.22%), Postives = 137/180 (76.11%), Query Frame = 1

Query:   19 GAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            G+  S GIFLHRSSDDAIVK N    NGDAG+A++ESFNADVS+N FE+NKYGVR+SVGCADNVFS+N IS++SKYN YTY GSD+P VV SGRSQ+N+FS N  TG +E+IK+  ADGT+F+DN F+         RF+DA  ++M GNTGL  G   LKV   +CFD +SDS Y+PVC
Sbjct:  329 GSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRA----KTARFEDAETTLMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 502

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 219 bits (558), Expect = 9.550e-60
Identity = 109/180 (60.56%), Postives = 135/180 (75.00%), Query Frame = 1

Query:   19 GAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            GA  S GIFLHRSSDDAIVK NYVHDNGDAG+A++E+FNADVS+N FE+NKYG+RMSVGCADNVFS+N I+ +SKYN YTY GSD P VV SGRSQ+        +G +ET+K+  ADGT+F+DN F+        +RF+D   ++M GN+GL  G   LKV + SCFD +SDS Y+PVC
Sbjct:  326 GAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFK----SAKTIRFEDCQGTLMSGNSGL--GGASLKVTDGSCFDKKSDSAYKPVC 499

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: A0A6H5KHR6_9PHAE (MEP22d protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR6_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 4.360e-55
Identity = 92/106 (86.79%), Postives = 100/106 (94.34%), Query Frame = 1

Query:  241 KYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC 558
            +YNAY+YLGSDEPDVVSSGRSQNNVFSQN F GA ETIKIKEADGTQFLDNVFE+GDADGLVVRFD+A  ++M+GNTGLDDGEFELKV ND+CFDGESDSGYEPVC
Sbjct:   13 RYNAYSYLGSDEPDVVSSGRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATGNLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 118

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BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 5.410e-53
Identity = 104/185 (56.22%), Postives = 128/185 (69.19%), Query Frame = 1

Query:    1 GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDADGLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPV 555
            GNEVYGGA +SAGIFLHR                DAGLAM+ESFNADVSDN FENNKYG+R SVG   NVF  N IS +++Y+ Y+YLGSD PDVV SGRSQ+NVF +N   G  E+IK+ +ADGTQF+DN FE    D   +RF+DA  ++M GN GL+  +  LKV+N + FD  SD G+EP+
Sbjct:  320 GNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFE----DATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12260.1898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JTN9_9PHAE	3.450e-114	93.01	MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ...	[more]
D7FXE4_ECTSI	7.820e-113	94.62	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
D7G339_ECTSI	5.940e-107	89.78	Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu...	[more]
Q7XAK0_9PHAE	1.150e-72	65.41	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]
Q7XAJ8_9PHAE	1.400e-66	63.78	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]
Q7XAJ9_9PHAE	2.390e-66	64.44	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]
Q7XAK2_9PHAE	1.040e-60	62.22	Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat...	[more]
A8CEP1_SACJA	9.550e-60	60.56	Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni...	[more]
A0A6H5KHR6_9PHAE	4.360e-55	86.79	MEP22d protein n=1 Tax=Ectocarpus sp. CCAP 1310/34...	[more]
Q7XAJ7_9PHAE	5.410e-53	56.22	Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12260	contig	Ecto-sp13_S_contig12260:2138..5090 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	89.4
Seed ortholog evalue	1.6e-15
Seed eggNOG ortholog	2880.D8LC73
Model size	2187
KEGG ko	ko:K11244
KEGG Pathway	ko04011,ko04139,map04011,map04139
Hectar predicted targeting category	other localisation
Exons	3
EggNOG free text desc.	protein xylosyltransferase activity
EggNOG OGs	KOG4157@1,KOG4157@2759
Cds size	444
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462651.9766803-UTR-Ecto-sp13_S_contig12260:2137..3763	1681462651.9766803-UTR-Ecto-sp13_S_contig12260:2137..3763	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig12260 2138..3763 -
1681462652.0079103-UTR-Ecto-sp13_S_contig12260:4794..4832	1681462652.0079103-UTR-Ecto-sp13_S_contig12260:4794..4832	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig12260 4795..4832 -
1681462652.0191984-UTR-Ecto-sp13_S_contig12260:5011..5090	1681462652.0191984-UTR-Ecto-sp13_S_contig12260:5011..5090	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig12260 5012..5090 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681462651.9890242-CDS-Ecto-sp13_S_contig12260:3763..4082	1681462651.9890242-CDS-Ecto-sp13_S_contig12260:3763..4082	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12260 3764..4082 -
1681462651.9983563-CDS-Ecto-sp13_S_contig12260:4669..4794	1681462651.9983563-CDS-Ecto-sp13_S_contig12260:4669..4794	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig12260 4670..4794 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12260.1898.1	prot_Ecto-sp13_S_contig12260.1898.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig12260 3764..4794 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig12260:2138..5090-
coding sequence from alignment at Ecto-sp13_S_contig12260:2138..5090-

protein sequence of mRNA_Ecto-sp13_S_contig12260.1898.1

>prot_Ecto-sp13_S_contig12260.1898.1 ID=prot_Ecto-sp13_S_contig12260.1898.1|Name=mRNA_Ecto-sp13_S_contig12260.1898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MLESFNADVSDNTFENNKYGVRMSVGCADNVFSENTISNNSKYNAYTYLG
SDEPDVVSSGRSQNNVFSQNVFTGAEETIKIKEADGTQFLDNVFEIGDAD
GLVVRFDDAMNSIMKGNTGLDDGEFELKVINDSCFDGESDSGYEPVC*

mRNA from alignment at Ecto-sp13_S_contig12260:2138..5090-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig12260.1898.1 ID=mRNA_Ecto-sp13_S_contig12260.1898.1|Name=mRNA_Ecto-sp13_S_contig12260.1898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2953bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12260:2138..5090- (Ectocarpus species13 EcNAP12_S_4_19m)
GGCAACGAAGTGTACGGCGGTGCCGAGACTTCTGCGGGCATCTTCCTGCA
CCGCAGCAGTGATGACGCGATCGTCAAGGGTGAGTTGTGTTGCATATATT
ATTGGCGGTGCTTGGGTGTGCTTGGTTGGTTTCTGCCGTTGGCCGTGTCT
TATGTGCGCACTCTCGTATTGAGTATGCTTTACGTAGTGGCTGGCCTGCC
CTCGGCGTATTCACCGTACGAGAATCCGACAAAACGTCTACTTCCTTTTT
ATTCTCAGGGAACTACGTGCACGACAACGGCGACGCCGGGTTAGCGATGC
TCGAGTCGTTCAACGCCGACGTGTCGGATAACACTTTCGAGAACAACAAG
TACGGCGTGCGGATGAGCGTGGGGTGCGCGGACAACGTCTTCTCCGAGAA
CACCATCAGCAACAACAGCAAGTGAGTGTTTGACGTGGAGGGAACCAAGA
GAGCGTTCAGTCGCCGCTCCCCTTGTCGTTTGTCTTGTATTGCGTCTTGG
TTTGTGAAATATATGACTTTTGCGGGATCATGTGCGTGTTATTTTTTTTG
TTCTTCACTTCAAATCGGCGCTCACAGCACTAGTGCCGTTGATTATAACC
CGTGGACACACAGAAGAGCTCTTCTCTACCCCCCCCTCCTGCGGTACTTC
GCCTTCAATTTTTAATGCGAGAAGAGTTTAGCACTCCCTCTGTGTACACA
CGAACTAGCGCTATCCACTTGGCCAGGAGCGGAAGCGAGAGAAAAACTCA
CTTTGCAAGAAAAGCTCGCCTACGCCGGGATTCGAACCCCTGACCTGTCC
TCTAGAAGGTTACGCGGCCACCAATTATTTTAAAATTAATAGACGTTCGG
GGCGACCGGCGTATGTGCGTGTTTTGGGTGGATGCGACAGGCCGACAGTT
CCATTGAAGGCATCGGTGTGATGAGATCGGTGACAACGAGGTACACATCT
GGCCCGTATTAAAAAAAATTACGCACTGACCCCTACCCACTTTCTCCGGC
TCCTTCAGGTACAACGCCTACACGTACCTTGGGTCGGACGAGCCGGACGT
TGTCTCTTCCGGGCGGTCCCAGAACAACGTCTTCTCACAGAACGTCTTTA
CCGGCGCTGAGGAGACGATCAAGATCAAGGAGGCCGACGGTACCCAGTTC
CTCGACAACGTCTTCGAGATTGGCGATGCCGATGGTCTGGTAGTTCGGTT
CGACGACGCCATGAATAGCATTATGAAGGGCAACACCGGGCTCGACGACG
GGGAGTTCGAGCTCAAGGTCATCAACGATTCGTGCTTCGACGGGGAGTCA
GACTCCGGCTACGAGCCTGTCTGCTGAGGAGCTAGGCTTAAAATTACCCA
ACAACGCCTGCCGTTGACCCGCCTAGTTCTGTCCTAAGGGAAAGGGCCCC
GTCATCCGGGGAGACCACACAAAATGTTTACACCGTTGGGGACACGCTTC
TTTGGGGCACCAAATTGTGTGTGCGTCGGACAAACCGCTCCCTGGGTGTT
ACACAAGTTTTTTTCTATGATATTCGCTGAACGTTGTGCGATGTCTCGTA
CTCGTTGTCGTGGTGTTTGACCGTTGGTTGTGACTTGTATCGTTTGATTA
TGCTGTTGGTTGGTTTGTTGATTTTGAAGGGCAAGACCATCGGAACTCTT
GTGGTTTGGCGAGTCGCGGGTTGTTGTTACTTTTGTCTTTTTTTTGTGCC
GGATCGCGGTCCGGCCATATGCAAGTGGGGCACACTTGAAATTAATTTTT
TTGGCGGGCCTTGGCAGTCGTGTACTACTTTGCGTATCTTGATTGTCGCT
GTGCGGCGGTTTGGCGGGACCACTCATTTCACGCAGTGATACCACAAATG
TGTTTCCCAGCTAGAGAATGGGCGATGTACCAGACCCTCATCTGACCCCA
ACAGGGGTGGGATGACATTGATTTTTGCTTGTGGGCATTTCCGGCTTTTC
GTGGGAACTAAGCCTTTGTGATTCAGTAGGATGTAGCATAGTTTTGCGAT
ATACTCTGTAGTTGGTTGTGCAACATCGGTGTTGTGTGTATCCCCTTCGT
TTTTTGTTATCTCTTCCTGAAGAGGGGGGGGGATAGTCTAGATGTCTTCC
GCCTTGGCATTCCAAACTTTGTAGTAGAGGTGTGGGTCGCGTTTGGTTGT
TGCACCCCTGTCCGCCGTGAGGCGTTCCGTTGAGGATGTGTTTCGCGGTT
GATGCAGGACGGTAATAGTGCTGGGTTCAGTACAACAGCAGTATTGCTAG
TCTTCGTGGCCGGGCTTTTGGACGTCTCGGTTCCGTGCACCCATTCAGGT
TGTCCCCCTCGATGTTTTCGGTTGCGCGTCCTGAAGACGCCCTGTACTGC
AGAAGTGCGCCCGGTGCTCTGCAAGACAAGAGCACTGGGAGTTTGTGAGT
AGTAGTGATTTGTAGGGTGGTGATGGTTCGGTGGAGTATCCTGGAGGCAC
AAATGATGTCGCAGCTTTGGGTGTGATCATCAGCTTCTCTTGCTTCTTGT
CTGTCTTCGTTGTGATTTGCAACAAGCACTTTGGGTTATCGAGCGATCAA
GTTGAAATAACTTGTTTTTCCGAGTGGCGGGGTTTCTGCAATCCTTGCGA
GCCCATCATCGACTTGGCGAAGAAGGTATTTTGGAGGGCATTTATTCGCC
TCTGACCTATGTGGTGCCGGACGTGTCAAACGAGCTGCTGTTGGTAAAAC
CACATGGGAACTTACTGGCGCCCTACGACCATGTCACATTCTCGTCAGGA
CATGGACGGGTTCGTGCACGGACATTGAGTAATAATTCCGTATGCATACG
AACGAATGGTTACTACAGCAGGTACTCTCCCTGGTTCCTACTGGTTACCT
ACGTCGTGCTCTTTCGATTGTTGACCACGGACCAATTCTCAGCTAGATTT
CAGGAATAGCAACTGGCACGAGTTGGAAAATGTGAGAAAGACAGCAATAA
CAA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12260:2138..5090-

>mRNA_Ecto-sp13_S_contig12260.1898.1 ID=mRNA_Ecto-sp13_S_contig12260.1898.1|Name=mRNA_Ecto-sp13_S_contig12260.1898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12260:2138..5090- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTCGAGTCGTTCAACGCCGACGTGTCGGATAACACTTTCGAGAACAA
CAAGTACGGCGTGCGGATGAGCGTGGGGTGCGCGGACAACGTCTTCTCCG
AGAACACCATCAGCAACAACAGCAAGTACAACGCCTACACGTACCTTGGG
TCGGACGAGCCGGACGTTGTCTCTTCCGGGCGGTCCCAGAACAACGTCTT
CTCACAGAACGTCTTTACCGGCGCTGAGGAGACGATCAAGATCAAGGAGG
CCGACGGTACCCAGTTCCTCGACAACGTCTTCGAGATTGGCGATGCCGAT
GGTCTGGTAGTTCGGTTCGACGACGCCATGAATAGCATTATGAAGGGCAA
CACCGGGCTCGACGACGGGGAGTTCGAGCTCAAGGTCATCAACGATTCGT
GCTTCGACGGGGAGTCAGACTCCGGCTACGAGCCTGTCTGCTGA