prot_Ecto-sp13_S_contig1226.1897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1226.1897.1
Unique Nameprot_Ecto-sp13_S_contig1226.1897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length444
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1226.1897.1 vs. uniprot
Match: D8LKH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH3_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 3.940e-106
Identity = 164/181 (90.61%), Postives = 172/181 (95.03%), Query Frame = 0 
Query:  263 MNHREAYRYTVGKGNFEAVKRTLLEKEDALRKGTGSFLMADTIQRFRSSSEKRPPTSELSARRGSQRRQTTAKRAMVHIESDPFQCGGYNSDKLKREETRRQDLLVHAKGRNNMFCRQKGYEPGDFLKHRSPPGGQNFDSGAASCRRGSVGGAISARKGGARSAKAAVMAAESRRKVHQHL 443
            MNH+EAYRYT GKGNFEA KRTLLEKEDALRKGTGSFLMADTIQRFRSSSE RPPTS+LSARRGSQRR+  AKRAMV IESDPFQCGGYNS+KLKREETRRQDLLVHAKGRNNMFCR+KGYEPGDFLKHRSPPGGQ+F+SGAASCRRGSVGGAI ARKGGARSA+AA MAAESRRK HQHL
Sbjct:    1 MNHQEAYRYTAGKGNFEAEKRTLLEKEDALRKGTGSFLMADTIQRFRSSSEGRPPTSDLSARRGSQRRRAAAKRAMVPIESDPFQCGGYNSEKLKREETRRQDLLVHAKGRNNMFCRRKGYEPGDFLKHRSPPGGQDFNSGAASCRRGSVGGAIGARKGGARSAEAAAMAAESRRKAHQHL 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1226.1897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKH3_ECTSI3.940e-10690.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1226contigEcto-sp13_S_contig1226:9934..14174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1226.1897.1mRNA_Ecto-sp13_S_contig1226.1897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1226 9755..14174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1226.1897.1 ID=prot_Ecto-sp13_S_contig1226.1897.1|Name=mRNA_Ecto-sp13_S_contig1226.1897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=444bp
MEGSNKILLVLRSFPRPCRQMATARSRQRLSRPSTAPAHRDLAPSPPIYS
PVSTSRNGDVGGVGGIGGLHQRQHQQQIELLRPHTADATTMRQPHTMVGG
GVVQGAAMIIPVNADGGRPEPAPVMGVENHRRPTTSDASPQRQQQQRRRD
ASIEPTPNTSSRAQAAAVEGGGQLRPSTTGGGRRRGTVVAHGGLDTTTAA
PNANGVGQRVTDGDGDSSRRRRQLIQQQQHQPPIVLRKEAFLRPFIQRNQ
EHLWAYDPAFVGMNHREAYRYTVGKGNFEAVKRTLLEKEDALRKGTGSFL
MADTIQRFRSSSEKRPPTSELSARRGSQRRQTTAKRAMVHIESDPFQCGG
YNSDKLKREETRRQDLLVHAKGRNNMFCRQKGYEPGDFLKHRSPPGGQNF
DSGAASCRRGSVGGAISARKGGARSAKAAVMAAESRRKVHQHL*
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