prot_Ecto-sp13_S_contig77377.18972.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77377.18972.1
Unique Nameprot_Ecto-sp13_S_contig77377.18972.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig77377.18972.1 vs. uniprot
Match: D8LGE7_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE7_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.590e-26
Identity = 48/52 (92.31%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:    1 KPDPWLAGTAPECTTALVMSKDAARLDRLSFGCPNLDAAFEGGVRVQGITEV 52
            KPDPWLAGTAPECTTAL MSKDAARLDRLSFGCP+LDAAFEGGVRVQG+TE+
Sbjct:   48 KPDPWLAGTAPECTTALAMSKDAARLDRLSFGCPSLDAAFEGGVRVQGVTEI 99
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BLAST of mRNA_Ecto-sp13_S_contig77377.18972.1 vs. uniprot
Match: A0A6H5KY82_9PHAE (RECA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY82_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.370e-24
Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:    1 KPDPWLAGTAPECTTALVMSKDAARLDRLSFGCPNLDAAFEGGVRVQGITEV 52
            KPDPWLAGTAPECTTAL M K+AARLDRLSFGCP+LDAAFEGGVRVQGITE+
Sbjct:   48 KPDPWLAGTAPECTTALAMLKNAARLDRLSFGCPSLDAAFEGGVRVQGITEI 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77377.18972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGE7_ECTSI1.590e-2692.31RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KY82_9PHAE1.370e-2490.38RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77377contigEcto-sp13_S_contig77377:459..614 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77377.18972.1mRNA_Ecto-sp13_S_contig77377.18972.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77377 459..614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77377.18972.1 ID=prot_Ecto-sp13_S_contig77377.18972.1|Name=mRNA_Ecto-sp13_S_contig77377.18972.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
KPDPWLAGTAPECTTALVMSKDAARLDRLSFGCPNLDAAFEGGVRVQGIT
EV
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