mRNA_Ecto-sp13_S_contig7736.18971.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig7736.18971.1
Unique Name	mRNA_Ecto-sp13_S_contig7736.18971.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI)

HSP 1 Score: 805 bits (2078), Expect = 3.170e-289
Identity = 428/496 (86.29%), Postives = 446/496 (89.92%), Query Frame = 1

Query:  352 MTEVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRSSSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNV---IGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGMLKHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHGASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEWEARKREVLSQ 1830
            MTEVLRGTRAV+SILDT+RFKDRK+TFWHGM+IKKTSK+RIDNIGV MLPN+CRSCIDIA+RHIRESD TTTSGE D DTP SSSDEATMA+PEEVAIVFD+FNSVPEV SLDSIYKKQLFRE +LRHFAAG+TIFRQ EHQDKICVILRGRV LTSKHSGVLFQAGTCNV   IGSIEPIVGMLTARCEAYTTVLCLGSD FAAVVNDSVCAERVAKKAFLKCSAVFSTL+DDDLNTVE LFT VTL DNQVICKEGSRVDHVYVVKRGFLRILKAFLPEE                          SADVETRL+HFDLGEIGPKDMLGENGMLKHLDTSS  STTP PAATE+VALPAIASSQEDAQHLSQPT+TPGDTTDHGAS PD D GDASPPSADAATDRAGSSRVAT+GPRKPA+IISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGV ALAQQLRRQNEW+ARKR VLSQ
Sbjct:    1 MTEVLRGTRAVESILDTERFKDRKMTFWHGMVIKKTSKYRIDNIGVEMLPNRCRSCIDIAERHIRESDATTTSGEADLDTPGSSSDEATMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTSKHSGVLFQAGTCNVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXSADVETRLKHFDLGEIGPKDMLGENGMLKHLDTSSAFSTTPPPAATETVALPAIASSQEDAQHLSQPTETPGDTTDHGASTPDWDTGDASPPSADAATDRAGSSRVATIGPRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVEALAQQLRRQNEWDARKRGVLSQ 496

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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: A0A6H5KSV6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE)

HSP 1 Score: 765 bits (1975), Expect = 3.830e-274
Identity = 413/492 (83.94%), Postives = 430/492 (87.40%), Query Frame = 1

Query:  355 TEVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRSSSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNVIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGMLKHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHGASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEWEARKREVLSQ 1830
            T+VLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKT KHRIDNIGVG+LP+QCRSCI+I QRHIRE+D         PDTP SSSDE TMA+PEEVAIVFD+FNSVPEV SLDSIYKKQLFRELRL+HFA G+TIFRQ EHQ+K                          VIGSI+PIVGMLTARCE YTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTL+DDDLNTVE LFTA+TL DNQVIC EGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPP HASTVAAGAASARRSS ADVETRL++FDLGEIGPKDMLGENGMLKHLDTS VLSTTPAPAATESV LPAIASSQEDAQHLSQPTD   DT DHGAS  DGDAGDASPPSADAATD AGS RVATMG RKPA+IISAAASGGTAEVYVANVYDLKKLQTDSF YCWKTAQRLHQARAQAWG GALAQQLRR+NEWEARK EVLSQ
Sbjct:    4 TQVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTFKHRIDNIGVGILPDQCRSCINIVQRHIREAD---------PDTPGSSSDETTMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFRELRLKHFATGSTIFRQWEHQNK--------------------------VIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPSHASTVAAGAASARRSSLADVETRLKYFDLGEIGPKDMLGENGMLKHLDTSLVLSTTPAPAATESVTLPAIASSQEDAQHLSQPTDARADTIDHGASTLDGDAGDASPPSADAATDGAGSPRVATMGLRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFCYCWKTAQRLHQARAQAWGAGALAQQLRRRNEWEARKGEVLSQ 460

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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: D8LBQ9_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ9_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 8.390e-25
Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 1

Query:  646 VFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHS-GVLFQAGTCN---VIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEED 1191
            VFDL  +VP + SLD +++++L   L L +   G  +FRQG+ Q+ + +IL GR+ + S    GV+   G  N   VIGSI P   + TA C    T+L L    F   +ND      V KK F +  ++F  L + DL+ +  +F   TL    V+C+EG RVD++Y+V+RG LR+LKAF+P  D
Sbjct:   52 VFDLLGAVPLIGSLDPVFRRKLLWMLDLANRQEGQILFRQGDKQETLWLILDGRIGVRSTDKQGVVHYTGEFNSGHVIGSILPEKRLATAICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 237

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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: A0A6H5JUG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG7_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 4.580e-19
Identity = 70/228 (30.70%), Postives = 105/228 (46.05%), Query Frame = 1

Query:  646 VFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHS-GVLFQAGTCN---------------------------------------------VIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEED 1191
            VFDL  +VP + SLD +++++L   L L +   G  +FRQG+ Q+ + +IL GR+ + S    GV+   G  N                                             V+GSI P   + T  C    T+L L    F   +ND      V KK F +  ++F  L + DL+ +  +F   TL    V+C+EG RVD++Y+V+RG LR+LKAF+P  D
Sbjct:   52 VFDLLGAVPLIRSLDPVFRRRLLWMLDLANRQEGQILFRQGDKQEALWLILDGRIGVRSTDKQGVVHHTGEFNSGHVENLNRVVRVWRADHGFVGWSERVGSTDGKSPQLSQTPPSTQVVGSILPEKRLATVICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 279

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FJW3_ECTSI	3.170e-289	86.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KSV6_9PHAE	3.830e-274	83.94	Cyclic nucleotide-binding domain-containing protei...	[more]
D8LBQ9_ECTSI	8.390e-25	38.71	cAMP-dependent protein kinase regulatory subunit n...	[more]
A0A6H5JUG7_9PHAE	4.580e-19	30.70	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7736	contig	Ecto-sp13_S_contig7736:1687..5331 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Metazoa
Stop	1
Start	1
Seed ortholog score	62.0
Seed ortholog evalue	1.1e-06
Seed eggNOG ortholog	27923.ML13939a-PA
Preferred name	PRKAR1A
Model size	1836
KEGG ko	ko:K04739
KEGG Pathway	ko04910,map04910
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000166,GO:0000226,GO:0000280,GO:0001704,GO:0001707,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0004857,GO:0004860,GO:0004862,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005929,GO:0005952,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006469,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007143,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007267,GO:0007268,GO:0007274,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007369,GO:0007389,GO:0007498,GO:0007507,GO:0007591,GO:0007596,GO:0007599,GO:0007610,GO:0007611,GO:0007612,GO:0007613,GO:0007635,GO:0008103,GO:0008150,GO:0008152,GO:0008283,GO:0008285,GO:0008306,GO:0008355,GO:0008603,GO:0009611,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010721,GO:0010927,GO:0010948,GO:0014706,GO:0014855,GO:0016020,GO:0016043,GO:0016310,GO:0016325,GO:0017076,GO:0019207,GO:0019210,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019932,GO:0019933,GO:0019935,GO:0019953,GO:0021700,GO:0022402,GO:0022407,GO:0022408,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030104,GO:0030154,GO:0030155,GO:0030234,GO:0030239,GO:0030291,GO:0030551,GO:0030552,GO:0030554,GO:0030951,GO:0030952,GO:0031032,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031399,GO:0031400,GO:0031401,GO:0031588,GO:0031594,GO:0031625,GO:0032147,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032870,GO:0032878,GO:0032944,GO:0032945,GO:0032989,GO:0032991,GO:0033002,GO:0033043,GO:0033673,GO:0033674,GO:0033762,GO:0034199,GO:0034236,GO:0035265,GO:0035556,GO:0036094,GO:0036211,GO:0040007,GO:0040020,GO:0042048,GO:0042060,GO:0042127,GO:0042129,GO:0042130,GO:0042221,GO:0042303,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042592,GO:0042692,GO:0042802,GO:0042995,GO:0043085,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043412,GO:0043434,GO:0043549,GO:0043900,GO:0043901,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044441,GO:0044444,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0045121,GO:0045202,GO:0045214,GO:0045471,GO:0045595,GO:0045596,GO:0045786,GO:0045835,GO:0045859,GO:0045860,GO:0045936,GO:0045937,GO:0046006,GO:0046007,GO:0046677,GO:0048285,GO:0048332,GO:0048468,GO:0048469,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048598,GO:0048599,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050670,GO:0050672,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050817,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050877,GO:0050878,GO:0050890,GO:0050891,GO:0050896,GO:0051018,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051321,GO:0051338,GO:0051347,GO:0051348,GO:0051445,GO:0051447,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055001,GO:0055002,GO:0055017,GO:0060038,GO:0060255,GO:0060259,GO:0060281,GO:0060283,GO:0060284,GO:0060419,GO:0060537,GO:0061061,GO:0061695,GO:0065007,GO:0065008,GO:0065009,GO:0070663,GO:0070664,GO:0070887,GO:0070925,GO:0071310,GO:0071375,GO:0071377,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071900,GO:0071901,GO:0071944,GO:0072359,GO:0072375,GO:0080090,GO:0090036,GO:0090038,GO:0097159,GO:0097305,GO:0097367,GO:0097435,GO:0097546,GO:0098589,GO:0098590,GO:0098772,GO:0098805,GO:0098857,GO:0098916,GO:0099536,GO:0099537,GO:0120025,GO:0120038,GO:0140013,GO:1900193,GO:1900194,GO:1901265,GO:1901363,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902532,GO:1902911,GO:1903037,GO:1903038,GO:1903046,GO:1903429,GO:1903430,GO:1903506,GO:1903538,GO:1905879,GO:1905880,GO:1990234,GO:2000112,GO:2000114,GO:2000241,GO:2000242,GO:2000253,GO:2000479,GO:2000480,GO:2001141
Exons	5
EggNOG free text desc.	cAMP-dependent protein kinase regulator activity
EggNOG OGs	38GS1@33154,3BBF2@33208,COG0664@1,KOG1113@2759
Ec32 ortholog description	Cyclic nucleotide-binding domain
Ec32 ortholog	Ec-10_000700.1
Cds size	1836
COG Functional cat.	T
Best tax level	Metazoa
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464043.784144-CDS-Ecto-sp13_S_contig7736:1686..2046	1681464043.784144-CDS-Ecto-sp13_S_contig7736:1686..2046	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7736 1687..2046 +
1681464043.795576-CDS-Ecto-sp13_S_contig7736:2150..2573	1681464043.795576-CDS-Ecto-sp13_S_contig7736:2150..2573	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7736 2151..2573 +
1681464043.8046448-CDS-Ecto-sp13_S_contig7736:3250..3328	1681464043.8046448-CDS-Ecto-sp13_S_contig7736:3250..3328	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7736 3251..3328 +
1681464043.8134751-CDS-Ecto-sp13_S_contig7736:3780..3918	1681464043.8134751-CDS-Ecto-sp13_S_contig7736:3780..3918	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7736 3781..3918 +
1681464043.821968-CDS-Ecto-sp13_S_contig7736:4494..5331	1681464043.821968-CDS-Ecto-sp13_S_contig7736:4494..5331	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig7736 4495..5331 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7736.18971.1	prot_Ecto-sp13_S_contig7736.18971.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig7736 1687..5331 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig7736:1687..5331+
coding sequence from alignment at Ecto-sp13_S_contig7736:1687..5331+

protein sequence of mRNA_Ecto-sp13_S_contig7736.18971.1

>prot_Ecto-sp13_S_contig7736.18971.1 ID=prot_Ecto-sp13_S_contig7736.18971.1|Name=mRNA_Ecto-sp13_S_contig7736.18971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=612bp
MLGNRVPFAGDAADVPTKHVSRAAPQAPTLRRSTGGDTHRQSFALRKATL
RRPTPPHSRTPVDVLHKTQQWRLHRLHHNNMKEIPRGGAGSTLDSMSITA
YEDGDGAGEARKHWQQAMTEVLRGTRAVDSILDTDRFKDRKLTFWHGMMI
KKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRS
SSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGT
TIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNVIGSIEPIVGMLT
ARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDL
NTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADC
RSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGML
KHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHG
ASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAE
VYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEW
EARKREVLSQT*

mRNA from alignment at Ecto-sp13_S_contig7736:1687..5331+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig7736.18971.1 ID=mRNA_Ecto-sp13_S_contig7736.18971.1|Name=mRNA_Ecto-sp13_S_contig7736.18971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3645bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7736:1687..5331+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTGGCAACCGCGTCCCATTCGCCGGCGATGCCGCGGATGTTCCGAC
CAAACACGTCAGCCGTGCAGCTCCACAGGCACCTACCCTTCGCAGGAGCA
CTGGGGGGGATACCCACCGTCAGAGCTTCGCCCTCCGTAAGGCAACTCTC
CGCAGACCAACACCACCTCACTCACGGACTCCGGTGGATGTTCTCCACAA
AACTCAGCAATGGAGACTCCATCGACTCCACCACAACAACATGAAGGAAA
TACCTCGCGGTGGGGCAGGAAGCACGTTAGACTCGATGTCTATCACAGCC
TACGAAGACGGAGATGGCGCTGGTGAAGCGAGGAAACATTGGCAGCAAGC
CATGACCGAGGTAGGCTTCGCAATAAACGAACTTGCGAACTTTTCCTACA
TGTCCGTGGCGTATGGCTTGCATGACTCGGTGCGCCCTTTCAAACGCACC
CGACATACACCCAGGTACTCCGGGGTACCCGTGCGGTCGATTCGATCCTC
GATACAGACCGGTTCAAGGACCGCAAGCTGACCTTCTGGCACGGCATGAT
GATAAAGAAAACATCCAAGCACAGGATCGACAATATCGGCGTCGGAATGC
TACCCAACCAGTGTCGCTCGTGCATCGACATCGCACAGCGACACATTCGT
GAATCTGACGGGACAACAACGAGCGGTGAGACCGATCCGGACACTCCGAG
GTCCTCTTCAGACGAAGCGACGATGGCCAACCCCGAGGAGGTTGCCATCG
TGTTCGATTTGTTCAACTCCGTTCCCGAGGTGATCAGCCTCGACTCCATC
TACAAGAAACAGCTATTTCGTGAACTCCGGTTGAGGCACTTCGCTGCAGG
GACCACCATATTCCGGCAAGGGGAACACCAAGACAAGGTGAGAGTTCCAG
ATTGACGAGCAACTTGGTGGTGGCCTTGCTCGTGGGGACTCGGGAGGGAC
GGCATCCTCCTGTAATGTAGACTGCTCTCTCTTCGACGCGTATTTGCACG
GTCATCGCTCGGAGATTTCTGCGCAGATTCGCCGCGAGCGATCACTTCGA
GCCCCTACGGGTAATCGAGAGACCGGGGGGCCCATTCCGGGCCCATGCGG
GCACTCGAGAAATCGGGGCCACCGGTCGAGGCGATAATGGCTGCGGCGAA
CGAGGAAGCCCCAAGGGAACAGAGTGCTGTGTTGGAGCGAGTTATGTCTT
CCTTTGGCGGGGGAGGGGAGCTTGAGGGTTGGTTTTTTCTTCGACATTTC
ACAATCTACCTGCTTGAGGGGCGACATCCCCGTGATTGCGGTCTTGGGCG
TATGGGTGCTCGGCTCCATGTTCATGAAGCGCCATGGAAGTCCCGAAACG
CGCGTGTTGTGGGTTGCTTCGCTGGTGGAGTTCCGTTCTCTTTAGAAGCC
GAAACCAAACCAGTACACTAAAGTAGCCAGCGCTGACTACAAAGGGTTGG
TTTCGGCGTCCACAATCCTCAAAGGCTCTGTCGTACATGTCGACAGCATA
ATTTCGGGCTTCTTGGCGAGAAATATCTGTGTTTGATACACCACCACGCT
CTCTTGACGCGCAGATCTGCGTCATTCTCAGAGGAAGGGTGCAGCTCACG
TCCAAGCACAGCGGGGTTTTGTTTCAAGCCGGGACCTGCAACGTTGGCGA
GGCAAGGATTTACGGTACACAGCAGGAAGCACGATCCTTCATTCAAAACT
GGACCTCAAGTGCACATCCGACACAGATGACATGTTTGCCAGTCAATCTG
GCGCTGCGTCGTATCAACGATGCATTTTAAGATCCTGGAAAAATTTCTGT
ATCCGTAGCTAGCGAGAGAACGCCTTGCGAATACCTACGCCTGAATGGGC
TGTTCAAACGTGCGTACCCCCTACCCGGCGAACCCTAGAAGGCTTGCACG
AGTAACCTTGGCGTTCGTACAAAAGTTTTTTCTCCTTATATGGTATTGCG
GCGCCCAGCTCAAGGGTTTCCGACTTTCGGGCCGTTCTGGGTAGCTTTGG
TTCTGATTAACACATGGTTTCGATCTCTGTACACAATTCTTCGCATGAGC
GCCGGCCAACAATGCCGCGTAACGGGCCCCCGCTTCGAAAGCAGGTGATC
GGGAGCATCGAGCCCATCGTAGGGATGCTGACGGCGAGGTGCGAAGCCTA
CACGACCGTGCTTTGCTTGGGATCGGACCGTTTCGCGGCGGTCGTGAACG
ATTCAGTCTGCGCCGAGCGTGTCGCAAAGAAGGTAACCTGTCGGAGAGAA
GGGGGAGTGTGGTTCTGTGTACTCTGGGGAAAGGTACTAGGGTATCACTT
GTCCCTCTTGCCCGTTAACGTCTTTGGTCACGAAAGCCAGAATCTTTGTT
TTCCCGCACCCACAGCCCAATGCTTCATTCAGTATAAAAAAGAACATTTG
CGTACTACACGTCGGTCCTGCACCGAATCCCGCGAGTTCGTATATACGCC
AGCGCTGGCGAGATTCTTGCACTCGCCAGTTCAACAATGTTTGGGTTGTG
GTTGGATGTAGACACGAAACCAAAGCCACAGCGGGTTTCCAGCCCTCAGG
CAGCACCAAGGCGCTAGACCTCACTAGGCCTAACCCACCCCTAAGCCCTA
ACCTAAACCCTAACCCTAACCCTAACCCAACACCCCAAGCTAGGTTGTTG
TGCAGTGGGTAGGCCTAGGTCGCTGTACCGAGCTACTGGAGCGTGTAAGA
ATCTCGCCAGCGCTGGTGTATATACGCCTCGTCCCGAATCCCGCGGTTCC
TCAAACAATCCCCGATACAAAACGTCCCCGTTCGGCTTTGCCGTCAAACA
AACGCCAGGCGTTCCTGAAGTGTAGCGCCGTGTTCTCCACCCTCGACGAC
GACGACCTCAACACCGTGGAGATGCTGTTCACGGCGGTCACCCTGCGCGA
CAACCAGGTCATCTGCAAGGAGGGCTCTCGCGTCGATCACGTCTACGTCG
TGAAGCGGGGGTTCCTCCGGATCCTCAAGGCGTTCCTCCCGGAAGAAGAT
GCCGACTGCCGCTCTGGACCTCCTCCACATGCCTCGACGGTCGCCGCCGG
GGCAGCCTCTGCGCGCAGATCCAGCTCGGCAGACGTCGAGACTCGGCTGG
AGCACTTCGACCTTGGAGAGATCGGGCCCAAGGATATGCTGGGAGAGAAC
GGTATGCTAAAGCACTTGGACACGTCGTCAGTGTTGTCGACGACGCCCGC
TCCGGCTGCGACGGAAAGTGTCGCACTACCGGCGATAGCGAGTAGCCAAG
AGGACGCACAACATCTCTCGCAGCCCACCGACACTCCTGGTGACACCACC
GATCATGGCGCTAGTATTCCAGACGGGGACGCTGGAGACGCGAGCCCCCC
TTCCGCCGACGCCGCAACGGATAGGGCTGGGTCATCTCGTGTAGCTACCA
TGGGTCCGAGAAAACCCGCCTTTATCATCTCTGCTGCTGCTTCTGGGGGA
ACGGCGGAAGTCTACGTCGCCAATGTGTACGACCTGAAGAAGCTGCAGAC
GGATAGTTTCCGCTACTGTTGGAAGACCGCTCAAAGGCTGCATCAAGCCA
GGGCGCAAGCTTGGGGAGTCGGAGCTTTGGCTCAGCAGTTGCGGAGGCAG
AACGAATGGGAGGCCCGAAAACGCGAAGTTTTATCGCAAACTTGA

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7736:1687..5331+

>mRNA_Ecto-sp13_S_contig7736.18971.1 ID=mRNA_Ecto-sp13_S_contig7736.18971.1|Name=mRNA_Ecto-sp13_S_contig7736.18971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1836bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7736:1687..5331+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTGGCAACCGCGTCCCATTCGCCGGCGATGCCGCGGATGTTCCGAC
CAAACACGTCAGCCGTGCAGCTCCACAGGCACCTACCCTTCGCAGGAGCA
CTGGGGGGGATACCCACCGTCAGAGCTTCGCCCTCCGTAAGGCAACTCTC
CGCAGACCAACACCACCTCACTCACGGACTCCGGTGGATGTTCTCCACAA
AACTCAGCAATGGAGACTCCATCGACTCCACCACAACAACATGAAGGAAA
TACCTCGCGGTGGGGCAGGAAGCACGTTAGACTCGATGTCTATCACAGCC
TACGAAGACGGAGATGGCGCTGGTGAAGCGAGGAAACATTGGCAGCAAGC
CATGACCGAGGTACTCCGGGGTACCCGTGCGGTCGATTCGATCCTCGATA
CAGACCGGTTCAAGGACCGCAAGCTGACCTTCTGGCACGGCATGATGATA
AAGAAAACATCCAAGCACAGGATCGACAATATCGGCGTCGGAATGCTACC
CAACCAGTGTCGCTCGTGCATCGACATCGCACAGCGACACATTCGTGAAT
CTGACGGGACAACAACGAGCGGTGAGACCGATCCGGACACTCCGAGGTCC
TCTTCAGACGAAGCGACGATGGCCAACCCCGAGGAGGTTGCCATCGTGTT
CGATTTGTTCAACTCCGTTCCCGAGGTGATCAGCCTCGACTCCATCTACA
AGAAACAGCTATTTCGTGAACTCCGGTTGAGGCACTTCGCTGCAGGGACC
ACCATATTCCGGCAAGGGGAACACCAAGACAAGATCTGCGTCATTCTCAG
AGGAAGGGTGCAGCTCACGTCCAAGCACAGCGGGGTTTTGTTTCAAGCCG
GGACCTGCAACGTGATCGGGAGCATCGAGCCCATCGTAGGGATGCTGACG
GCGAGGTGCGAAGCCTACACGACCGTGCTTTGCTTGGGATCGGACCGTTT
CGCGGCGGTCGTGAACGATTCAGTCTGCGCCGAGCGTGTCGCAAAGAAGG
CGTTCCTGAAGTGTAGCGCCGTGTTCTCCACCCTCGACGACGACGACCTC
AACACCGTGGAGATGCTGTTCACGGCGGTCACCCTGCGCGACAACCAGGT
CATCTGCAAGGAGGGCTCTCGCGTCGATCACGTCTACGTCGTGAAGCGGG
GGTTCCTCCGGATCCTCAAGGCGTTCCTCCCGGAAGAAGATGCCGACTGC
CGCTCTGGACCTCCTCCACATGCCTCGACGGTCGCCGCCGGGGCAGCCTC
TGCGCGCAGATCCAGCTCGGCAGACGTCGAGACTCGGCTGGAGCACTTCG
ACCTTGGAGAGATCGGGCCCAAGGATATGCTGGGAGAGAACGGTATGCTA
AAGCACTTGGACACGTCGTCAGTGTTGTCGACGACGCCCGCTCCGGCTGC
GACGGAAAGTGTCGCACTACCGGCGATAGCGAGTAGCCAAGAGGACGCAC
AACATCTCTCGCAGCCCACCGACACTCCTGGTGACACCACCGATCATGGC
GCTAGTATTCCAGACGGGGACGCTGGAGACGCGAGCCCCCCTTCCGCCGA
CGCCGCAACGGATAGGGCTGGGTCATCTCGTGTAGCTACCATGGGTCCGA
GAAAACCCGCCTTTATCATCTCTGCTGCTGCTTCTGGGGGAACGGCGGAA
GTCTACGTCGCCAATGTGTACGACCTGAAGAAGCTGCAGACGGATAGTTT
CCGCTACTGTTGGAAGACCGCTCAAAGGCTGCATCAAGCCAGGGCGCAAG
CTTGGGGAGTCGGAGCTTTGGCTCAGCAGTTGCGGAGGCAGAACGAATGG
GAGGCCCGAAAACGCGAAGTTTTATCGCAAACTTGA