prot_Ecto-sp13_S_contig7736.18971.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7736.18971.1
Unique Nameprot_Ecto-sp13_S_contig7736.18971.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length612
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: D7FJW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI)

HSP 1 Score: 805 bits (2078), Expect = 3.170e-289
Identity = 428/496 (86.29%), Postives = 446/496 (89.92%), Query Frame = 0 
Query:  118 MTEVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRSSSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNV---IGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGMLKHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHGASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEWEARKREVLSQ 610
            MTEVLRGTRAV+SILDT+RFKDRK+TFWHGM+IKKTSK+RIDNIGV MLPN+CRSCIDIA+RHIRESD TTTSGE D DTP SSSDEATMA+PEEVAIVFD+FNSVPEV SLDSIYKKQLFRE +LRHFAAG+TIFRQ EHQDKICVILRGRV LTSKHSGVLFQAGTCNV   IGSIEPIVGMLTARCEAYTTVLCLGSD FAAVVNDSVCAERVAKKAFLKCSAVFSTL+DDDLNTVE LFT VTL DNQVICKEGSRVDHVYVVKRGFLRILKAFLPEE                          SADVETRL+HFDLGEIGPKDMLGENGMLKHLDTSS  STTP PAATE+VALPAIASSQEDAQHLSQPT+TPGDTTDHGAS PD D GDASPPSADAATDRAGSSRVAT+GPRKPA+IISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGV ALAQQLRRQNEW+ARKR VLSQ
Sbjct:    1 MTEVLRGTRAVESILDTERFKDRKMTFWHGMVIKKTSKYRIDNIGVEMLPNRCRSCIDIAERHIRESDATTTSGEADLDTPGSSSDEATMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTSKHSGVLFQAGTCNVGEVIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXSADVETRLKHFDLGEIGPKDMLGENGMLKHLDTSSAFSTTPPPAATETVALPAIASSQEDAQHLSQPTETPGDTTDHGASTPDWDTGDASPPSADAATDRAGSSRVATIGPRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVEALAQQLRRQNEWDARKRGVLSQ 496
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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: A0A6H5KSV6_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE)

HSP 1 Score: 765 bits (1975), Expect = 3.830e-274
Identity = 413/492 (83.94%), Postives = 430/492 (87.40%), Query Frame = 0 
Query:  119 TEVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRSSSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNVIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGMLKHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHGASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEWEARKREVLSQ 610
            T+VLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKT KHRIDNIGVG+LP+QCRSCI+I QRHIRE+D         PDTP SSSDE TMA+PEEVAIVFD+FNSVPEV SLDSIYKKQLFRELRL+HFA G+TIFRQ EHQ+K                          VIGSI+PIVGMLTARCE YTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTL+DDDLNTVE LFTA+TL DNQVIC EGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPP HASTVAAGAASARRSS ADVETRL++FDLGEIGPKDMLGENGMLKHLDTS VLSTTPAPAATESV LPAIASSQEDAQHLSQPTD   DT DHGAS  DGDAGDASPPSADAATD AGS RVATMG RKPA+IISAAASGGTAEVYVANVYDLKKLQTDSF YCWKTAQRLHQARAQAWG GALAQQLRR+NEWEARK EVLSQ
Sbjct:    4 TQVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTFKHRIDNIGVGILPDQCRSCINIVQRHIREAD---------PDTPGSSSDETTMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFRELRLKHFATGSTIFRQWEHQNK--------------------------VIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPSHASTVAAGAASARRSSLADVETRLKYFDLGEIGPKDMLGENGMLKHLDTSLVLSTTPAPAATESVTLPAIASSQEDAQHLSQPTDARADTIDHGASTLDGDAGDASPPSADAATDGAGSPRVATMGLRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFCYCWKTAQRLHQARAQAWGAGALAQQLRRRNEWEARKGEVLSQ 460
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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: D8LBQ9_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ9_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 8.390e-25
Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 0 
Query:  216 VFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHS-GVLFQAGTCN---VIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEED 397
            VFDL  +VP + SLD +++++L   L L +   G  +FRQG+ Q+ + +IL GR+ + S    GV+   G  N   VIGSI P   + TA C    T+L L    F   +ND      V KK F +  ++F  L + DL+ +  +F   TL    V+C+EG RVD++Y+V+RG LR+LKAF+P  D
Sbjct:   52 VFDLLGAVPLIGSLDPVFRRKLLWMLDLANRQEGQILFRQGDKQETLWLILDGRIGVRSTDKQGVVHYTGEFNSGHVIGSILPEKRLATAICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 237
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BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Match: A0A6H5JUG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG7_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 4.580e-19
Identity = 70/228 (30.70%), Postives = 105/228 (46.05%), Query Frame = 0 
Query:  216 VFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGTTIFRQGEHQDKICVILRGRVQLTSKHS-GVLFQAGTCN---------------------------------------------VIGSIEPIVGMLTARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDLNTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEED 397
            VFDL  +VP + SLD +++++L   L L +   G  +FRQG+ Q+ + +IL GR+ + S    GV+   G  N                                             V+GSI P   + T  C    T+L L    F   +ND      V KK F +  ++F  L + DL+ +  +F   TL    V+C+EG RVD++Y+V+RG LR+LKAF+P  D
Sbjct:   52 VFDLLGAVPLIRSLDPVFRRRLLWMLDLANRQEGQILFRQGDKQEALWLILDGRIGVRSTDKQGVVHHTGEFNSGHVENLNRVVRVWRADHGFVGWSERVGSTDGKSPQLSQTPPSTQVVGSILPEKRLATVICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 279
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7736.18971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FJW3_ECTSI3.170e-28986.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSV6_9PHAE3.830e-27483.94Cyclic nucleotide-binding domain-containing protei... [more]
D8LBQ9_ECTSI8.390e-2538.71cAMP-dependent protein kinase regulatory subunit n... [more]
A0A6H5JUG7_9PHAE4.580e-1930.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 341..462
e-value: 0.0074
score: 25.5
coord: 219..339
e-value: 0.16
score: 16.4
IPR000595Cyclic nucleotide-binding domainPFAMPF00027cNMP_bindingcoord: 244..322
e-value: 1.2E-7
score: 31.6
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 341..390
score: 9.128
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 225..292
score: 10.506
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 202..328
e-value: 3.0E-13
score: 51.5
NoneNo IPR availablePANTHERPTHR23011UNCHARACTERIZEDcoord: 209..610
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 213..323
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 334..466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7736contigEcto-sp13_S_contig7736:1687..5331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7736.18971.1mRNA_Ecto-sp13_S_contig7736.18971.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7736 1687..5331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7736.18971.1 ID=prot_Ecto-sp13_S_contig7736.18971.1|Name=mRNA_Ecto-sp13_S_contig7736.18971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=612bp
MLGNRVPFAGDAADVPTKHVSRAAPQAPTLRRSTGGDTHRQSFALRKATL
RRPTPPHSRTPVDVLHKTQQWRLHRLHHNNMKEIPRGGAGSTLDSMSITA
YEDGDGAGEARKHWQQAMTEVLRGTRAVDSILDTDRFKDRKLTFWHGMMI
KKTSKHRIDNIGVGMLPNQCRSCIDIAQRHIRESDGTTTSGETDPDTPRS
SSDEATMANPEEVAIVFDLFNSVPEVISLDSIYKKQLFRELRLRHFAAGT
TIFRQGEHQDKICVILRGRVQLTSKHSGVLFQAGTCNVIGSIEPIVGMLT
ARCEAYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLDDDDL
NTVEMLFTAVTLRDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEDADC
RSGPPPHASTVAAGAASARRSSSADVETRLEHFDLGEIGPKDMLGENGML
KHLDTSSVLSTTPAPAATESVALPAIASSQEDAQHLSQPTDTPGDTTDHG
ASIPDGDAGDASPPSADAATDRAGSSRVATMGPRKPAFIISAAASGGTAE
VYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVGALAQQLRRQNEW
EARKREVLSQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like