prot_Ecto-sp13_S_contig7735.18969.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7735.18969.1
Unique Nameprot_Ecto-sp13_S_contig7735.18969.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length541
Homology
BLAST of mRNA_Ecto-sp13_S_contig7735.18969.1 vs. uniprot
Match: D7G1W3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W3_ECTSI)

HSP 1 Score: 870 bits (2249), Expect = 4.200e-313
Identity = 468/538 (86.99%), Postives = 484/538 (89.96%), Query Frame = 0
Query:    1 RLADEVSDGKVDLRRNPGVPSARGVSEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEAGGKGGGGRGISTLLGVLLHLGVRPSPPSLPSAESQQAKQQPSHERNHISESAQAREEAENKEGKLEGGQRVSSGTKEGNPGWEEVVGDPGRLVADYTVRLLSALVSMSKARSYMLGERCEETIETLAGLLSGENYQETSLAKRQLGVLERLSRRGSAQEAIASSSFVDWAAKMLESCSFQGAGARDPCPLFVLRVTDILGNISGSISGRTAALAASPDLLGSFGNLLEHDNAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGSDKTDSAFGHNIQSLLDLMGDTLDLDAEHGENGRLQFSEPGAGGWQDDAGDSDLLSDEEPGEDPVVSSYVQVTNAPCGEKLLRERYRLSTAEAKEEAITCSLGGATWGGEEEELVCGGIRTKPPAWCPGAGESKGADNDTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSD 538
            RLA+EV +GKVDLRRNPGV SA GV+EDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFD+RSTEAGGKGGGGRG+STLLGVLL LGVRPSPPSLPSAES +AKQQPSHE  H    AQA EEA N E   +G +RVSSGTKE NP WEE  GDPGRLVADYTVRLLSALVSMSKARSYMLGE+CEETIE LA LLSGENY+ETSLAKR LGVLERLSRR SAQEAIASSSFVDWAAKML SCS QG GARDPCPLFVLRVT ILGN SGS+SGRTAALAASPDLL SFGNLLEHD+AQVRTSAVRGLKLLLGARE RERAL MGMDALLQNLGSC+GSD  DSAF HNIQSLLDLMGDTLD DAE GE+GR Q SE G GG Q+DAGDSD LSDEE GE PVVS YVQVTNAPCGEKLLRERYRLSTAEAKEEAI CS GGA WGGEEEELVCGGIRTK PA CPGAGESKGA+N TPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSD
Sbjct:  173 RLAEEVYEGKVDLRRNPGVSSASGVNEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDIRSTEAGGKGGGGRGVSTLLGVLLRLGVRPSPPSLPSAESHEAKQQPSHEPKHT---AQAPEEAGNTE---DGAKRVSSGTKEENPRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEKCEETIEILAELLSGENYRETSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLLSCSSQGPGARDPCPLFVLRVTGILGNTSGSVSGRTAALAASPDLLRSFGNLLEHDDAQVRTSAVRGLKLLLGAREGRERALEMGMDALLQNLGSCEGSDNNDSAFEHNIQSLLDLMGDTLDPDAEEGEDGRRQLSESGGGG-QEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGAPWGGEEEELVCGGIRTKAPARCPGAGESKGANNHTPRLPTPEAGTATLIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSD 703          
BLAST of mRNA_Ecto-sp13_S_contig7735.18969.1 vs. uniprot
Match: A0A6H5KFS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS9_9PHAE)

HSP 1 Score: 569 bits (1466), Expect = 5.240e-192
Identity = 338/554 (61.01%), Postives = 358/554 (64.62%), Query Frame = 0
Query:    1 RLADEVSDGKVDLRRNPGVPSARGVSEDVATAAINAALLLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEAGGKGGGGRGISTLLGVLLHLGVRPSPPSLPSAESQQAKQQPSHERNHISESAQAREEAENKEGKLEGGQRVSSGTKEGNPGWEEVVGDPGRLVADYTVRLLSALVSMSKARSYMLGE----------------------------------------------------------------------------RCEETIETLAGLLSGENYQETSLAKRQLGVLERLSRRGSAQEAIASSSFVDWAAKMLESCSFQGAGARDPCPLFVLRVTDILGNISGSISGRTAALAASPDLLGSFGNLLEHDNAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGSDKTDSAFGHNIQ----SLLDLMGDTLDLDAEHGENGRLQFSEPGAGGWQDDAGDSDLLSDEEPGEDPVVSSYVQVTNAPCGEKLLRERYRLSTAEAKEEAITCSLGGATWGGEEEELVCGGIRTKPPAW 474
            RLA+EVS+GKVDLRRNPGV SA  V++D ATAAINAAL+LQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTE G K                                                              +  +RVS G KE N  WEE  GDPGRLVADYTVRLLSALVSMSKARSYMLGE                                                                             CEETIETL  LLSGE YQ+TSLAKR LGVLERLSRR SAQEAIASSSFVDWAAKMLESCSFQGAG R PCPLFVLRVTDILGN+SG +SGRTAALAASPDLL SFGNLLEHD+AQVR SAVRGLKLLLGAREARERAL MGMDALLQNLGSC+GSD +DSAF HNIQ     ++D +G    L A +G +  +       GG Q+DAGDSD LSDEE GE PVVS YVQVTNAPCGEKLLRERYRLSTAEAKEEAI CS GGATWGGEEEELVCGGIRTKPPAW
Sbjct:  393 RLAEEVSEGKVDLRRNPGVSSAGSVNKDAATAAINAALVLQTVRWRFSRAPPGKSRRGVLYHIIRNDIFDLRSTEVGVK--------------------------------------------------------------DSAKRVSLGPKEENLRWEEFGGDPGRLVADYTVRLLSALVSMSKARSYMLGEVRNEELSYSDLSRGHLSPCAISALLVVFQRAARPREELEIPLPWPRVPAGVGRWYGKRTSQMWPHAVDEKLRGCGPLCEETIETLVELLSGEKYQKTSLAKRLLGVLERLSRRRSAQEAIASSSFVDWAAKMLESCSFQGAGTRHPCPLFVLRVTDILGNVSGRVSGRTAALAASPDLLRSFGNLLEHDDAQVRASAVRGLKLLLGAREARERALEMGMDALLQNLGSCEGSDNSDSAFEHNIQVKREQVIDTVGGGGILWAVNGIHAEV------TGGGQEDAGDSDFLSDEESGEAPVVSHYVQVTNAPCGEKLLRERYRLSTAEAKEEAIACSSGGATWGGEEEELVCGGIRTKPPAW 878          
BLAST of mRNA_Ecto-sp13_S_contig7735.18969.1 vs. uniprot
Match: A0A0V0QQX0_PSEPJ (LisH domain-containing protein ARMC9 n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QQX0_PSEPJ)

HSP 1 Score: 60.5 bits (145), Expect = 7.150e-6
Identity = 57/201 (28.36%), Postives = 89/201 (44.28%), Query Frame = 0
Query:  169 VADYTVRLLSALVSMSKARSYMLGERCEETIETLAGLLSGENYQETSLAKRQLGVLERLSRRGSAQEAIASSSFVDWAAKML--ESCSFQGAGARDPCPLFVLRVTDILGNISGSISGRTAALAASPDLLGSFGNLLEHDNAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGSDKTDSAFGHNIQSLLDLM 367
            + + TV+L++ L S    RSY++  +  + +  L  +L  +  QE  + K  LG L++LS R   Q  +     + W  + L  E  S           LF+        N+S    G+T A     ++L    +LLEH+N QVRT     L  LL     RE+A  MGM  +L  L      + +D  F   IQ ++D +
Sbjct:  402 IKEQTVKLVNQLASDFYGRSYLV--KYPQLVLNLIQVLK-DQPQENLIRKNALGALQKLSLRRKPQIVMIEHDLIKWIVQTLKNEKDSLSEYSQEYATALFM--------NLSLRSLGKTKAQDPKEEVLVVLNDLLEHENMQVRTFVNGTLYSLLSRHSLREQAKAMGMGDILNYL-----KENSDERFKKQIQYIMDQL 586          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7735.18969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1W3_ECTSI4.200e-31386.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS9_9PHAE5.240e-19261.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0V0QQX0_PSEPJ7.150e-628.36LisH domain-containing protein ARMC9 n=1 Tax=Pseud... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 160..371
e-value: 1.3E-6
score: 29.3
IPR040369LisH domain-containing protein ARMC9PANTHERPTHR14881FAMILY NOT NAMEDcoord: 33..342
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 171..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7735contigEcto-sp13_S_contig7735:181..5814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7735.18969.1mRNA_Ecto-sp13_S_contig7735.18969.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7735 181..6399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7735.18969.1 ID=prot_Ecto-sp13_S_contig7735.18969.1|Name=mRNA_Ecto-sp13_S_contig7735.18969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=541bp
RLADEVSDGKVDLRRNPGVPSARGVSEDVATAAINAALLLQTVRWRFSRA
PPGKSRRGVLYHIIRNDIFDLRSTEAGGKGGGGRGISTLLGVLLHLGVRP
SPPSLPSAESQQAKQQPSHERNHISESAQAREEAENKEGKLEGGQRVSSG
TKEGNPGWEEVVGDPGRLVADYTVRLLSALVSMSKARSYMLGERCEETIE
TLAGLLSGENYQETSLAKRQLGVLERLSRRGSAQEAIASSSFVDWAAKML
ESCSFQGAGARDPCPLFVLRVTDILGNISGSISGRTAALAASPDLLGSFG
NLLEHDNAQVRTSAVRGLKLLLGAREARERALGMGMDALLQNLGSCKGSD
KTDSAFGHNIQSLLDLMGDTLDLDAEHGENGRLQFSEPGAGGWQDDAGDS
DLLSDEEPGEDPVVSSYVQVTNAPCGEKLLRERYRLSTAEAKEEAITCSL
GGATWGGEEEELVCGGIRTKPPAWCPGAGESKGADNDTPRLPTPEAGTAT
LIRGEEKVYDRRRPGLPDEMQSRPRIPRTPAGSISVSDSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR040369ARMC9
IPR016024ARM-type_fold