mRNA_Ecto-sp13_S_contig7728.18966.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: D8LQ45_ECTSI (Phosphoesterase, RecJ-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ45_ECTSI) HSP 1 Score: 606 bits (1563), Expect = 8.750e-213 Identity = 316/344 (91.86%), Postives = 321/344 (93.31%), Query Frame = 1
Query: 1 MCQRLAVPFLLIVQASLGYCPQNALRTTDTSAPSWLNGYPSARQRRSSHSRHHQRPRGTGRRGSSSNPSTTCHATHLHHQQGPGRNQRAGSGSAIAAASRSGSGGEVGCRGDGGVTGAAVGGRRRRTFLTGLRAKRVAGEGISEEQEKARAAHRARLGATPKPPPREHVPPPPNTQALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDRIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
MCQRLAVPFLLIVQASLGYCP NALRTTDTSAPSW NG+PSARQRRSSHSRH QRPRGTGRRGSSSNPS TCHATHLHHQQGPGRNQRAG GE GCRGDGGVTGAAVGGRRRRTFLTGLRAKRVAGEG+SEEQEKARAAHRARL A PKPPPREHVPPPPNTQALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFL LHKNLFPIKALRDIDHDRIFRVGLVDAQ+IDRIGTAASLLANATEVHVVDHHNEQSSDINATS+VIE+VGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATAR A
Sbjct: 1 MCQRLAVPFLLIVQASLGYCPPNALRTTDTSAPSWFNGHPSARQRRSSHSRHQQRPRGTGRRGSSSNPSATCHATHLHHQQGPGRNQRAGXXXXXXXXXXXXXXGEGGCRGDGGVTGAAVGGRRRRTFLTGLRAKRVAGEGVSEEQEKARAAHRARLAARPKPPPREHVPPPPNTQALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLTLHKNLFPIKALRDIDHDRIFRVGLVDAQKIDRIGTAASLLANATEVHVVDHHNEQSSDINATSIVIEEVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARDA 344
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A835YMN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN8_9STRA) HSP 1 Score: 220 bits (560), Expect = 8.250e-63 Identity = 118/200 (59.00%), Postives = 141/200 (70.50%), Query Frame = 1
Query: 514 PPNTQALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDRIFRVGLVDAQRIDRIGTAASLLANATE---------------------------VHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
P LNVVLTHTTADFD+LAAAVGLA++WQ E+P C VCLPRG+HP V FLALHKNLFP+ AL+D+ D++ RVGLVDAQR DR+G A +LL A E VHV DHH E++SDI AT +VIEKVGSV+TII E LQ+ GL++ +AEATL+ALGVHSDTGSLTF+SAT+R A
Sbjct: 93 PVGVDKLNVVLTHTTADFDSLAAAVGLARVWQSEQPHIPCYVCLPRGSHPNVAHFLALHKNLFPVIALKDVSADQVHRVGLVDAQRKDRVGPAETLLDTAEESCANLRHVCHVCSADMCCNGGQWRGAKVHVFDHHFEKTSDIAATKLVIEKVGSVTTIIAELLQKGGLRLRDAEATLMALGVHSDTGSLTFESATSRDA 292
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: W7U1M5_9STRA (Polynucleotide adenylyltransferase region n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M5_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.450e-52 Identity = 91/167 (54.49%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 526 QALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDRIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATAR 1026
QA+NVVLTH ADFD+LAAAVGLAK W + P+ E VC+P+G HP V+ FLALH LFP++AL ID + ++G+VDA DR+G LLA+A EVHV DHH + DI AT++ +E VGSV+T++ E+L+E + + +AEATLLA+G+H+DTGS+T+D T R
Sbjct: 118 QAINVVLTHAIADFDSLAAAVGLAKYWSHQNPETEAYVCMPQGAHPSVEAFLALHSVLFPLRALGTIDPSHVHKLGVVDASTKDRLGAGQGLLASAREVHVFDHHAMKVPDIEATALNLEDVGSVTTMVVERLREADVNITDAEATLLAIGIHADTGSMTYDCTTVR 284
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A7S4V3V2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3V2_9STRA) HSP 1 Score: 178 bits (452), Expect = 5.390e-47 Identity = 101/190 (53.16%), Postives = 125/190 (65.79%), Query Frame = 1
Query: 535 NVVLTHTTADFDTLAAAVGLAKLWQDERPDDECC---------------------VCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDR--IFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDI-NATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
NVVLTH TADFD+LA+AVGLAKLW V LPRG HP V++FL+LHK+LFPI++L+ + D + R+GLVDAQR DRIG A LL+ A V VVDHH + +DI AT V+EKVGSVST+I E+LQ+ L++ EAEATLLALG+H+DTGSL +DS T R A
Sbjct: 240 NVVLTHCTADFDSLASAVGLAKLWSSSPKGSSXXXXXXXXXXXXXKNKQKVIPTFVVLPRGAHPAVQKFLSLHKHLFPIRSLKSLPSDLSGLHRLGLVDAQRRDRIGPAEHLLSYAKRVTVVDHHIDGETDIPEATDYVVEKVGSVSTMIVERLQQSQLELSEAEATLLALGIHADTGSLCYDSTTPRDA 429
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: D8LJV0_ECTSI (Polynucleotide adenylyltransferase region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV0_ECTSI) HSP 1 Score: 174 bits (442), Expect = 8.680e-47 Identity = 94/176 (53.41%), Postives = 119/176 (67.61%), Query Frame = 1
Query: 526 QALNVVLTHTTADFDTLAAAVGLAKLWQDERPDDECCVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDRIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQER-------GLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
Q NVVLTH +ADFD+LAAAVG+AKLW E V LPRG HP V +FLALH+ LFPI L +D +VG+ DAQ DR+G A+ LL A VHV DHH ++ SDI + IE VG+ +T++TE ++ G+Q+ EAE+TLLALG+H+DTGSLT+DSATAR A
Sbjct: 21 QPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEQGAGVGVQLTEAESTLLALGIHADTGSLTYDSATARDA 196
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A7S2XP97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP97_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.360e-46 Identity = 103/198 (52.02%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 535 NVVLTHTTADFDTLAAAVGLAKLWQDE-RPDDE----------------------------CCVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDR--IFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDI-NATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
NVVLTH TADFD+LA+AVGLAKLW E RP+++ V LPRG HP V+RFL+LHK+LFPI++LR + D + R+GLVDAQR DRIG A LL+ A V VVDHH + +DI AT V+++VGSVST++ E+LQ +++ EAEATLLALG+H+DTGSL FDS T R A
Sbjct: 102 NVVLTHCTADFDSLASAVGLAKLWSTEARPNNDNPTTSADDDGSLDNNINNSEYDSSSHVPTFVVLPRGAHPGVQRFLSLHKHLFPIRSLRSLPEDLSGLNRLGLVDAQRRDRIGPAEPLLSWAKRVTVVDHHMDSETDIPEATDYVVDQVGSVSTMVAERLQAAQIELSEAEATLLALGIHADTGSLQFDSTTPRDA 299
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A7S4R7K6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7K6_9STRA) HSP 1 Score: 178 bits (452), Expect = 3.200e-46 Identity = 101/190 (53.16%), Postives = 125/190 (65.79%), Query Frame = 1
Query: 535 NVVLTHTTADFDTLAAAVGLAKLWQDERPDDECC---------------------VCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDR--IFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDI-NATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
NVVLTH TADFD+LA+AVGLAKLW V LPRG HP V++FL+LHK+LFPI++L+ + D + R+GLVDAQR DRIG A LL+ A V VVDHH + +DI AT V+EKVGSVST+I E+LQ+ L++ EAEATLLALG+H+DTGSL +DS T R A
Sbjct: 240 NVVLTHCTADFDSLASAVGLAKLWSSSPKGSSXXXXXXXXXXXXXKNKQKVIPTFVVLPRGAHPAVQKFLSLHKHLFPIRSLKSLPSDLSGLHRLGLVDAQRRDRIGPAEHLLSYAKRVTVVDHHIDGETDIPEATDYVVEKVGSVSTMIVERLQQSQLELSEAEATLLALGIHADTGSLCYDSTTPRDA 429
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A1Z5JWQ6_FISSO (tRNA nucleotidyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWQ6_FISSO) HSP 1 Score: 174 bits (442), Expect = 2.310e-45 Identity = 96/181 (53.04%), Postives = 127/181 (70.17%), Query Frame = 1
Query: 535 NVVLTHTTADFDTLAAAVGLAKLWQ--------DERPDDECC-----VCLPRGTHPVVKRFLALHKNLFPIKALRDIDHD--RIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
NVVLTH+TADFD+LA+AVGLAKLW D + D V LPRG HP V+RFL+LHK+LFPI++L+ + R+ R+ LVDAQR +R+ A LL +A + VVDHH +Q SDI A V++KVGSV+T+I E+LQ++ + + EAEATLLALG+H+DTG+L FD+ T R A
Sbjct: 102 NVVLTHSTADFDSLASAVGLAKLWSAEAVPTSSDVKSFDSASHVPTYVVLPRGAHPSVQRFLSLHKHLFPIRSLKSLPSPAGRLNRLALVDAQRKERLIPAEGLLEHAKRITVVDHHVDQDSDIAADDYVVDKVGSVTTLIAERLQQQQVLLTEAEATLLALGIHADTGNLCFDNTTPRDA 282
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: C1N3D7_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N3D7_MICPC) HSP 1 Score: 172 bits (436), Expect = 4.610e-45 Identity = 91/168 (54.17%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 532 LNVVLTHTTADFDTLAAAVGLAKLWQDERPDDEC-CVCLPRGTHPVVKRFLALHKNLFPIKALRDIDHDRIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDINATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
L VVLTH +ADFDTL++AVGLAKL +D R +C CV LPRG P V +LALHKN FPIK R +D R+ VG+VDAQR DR+ AS L +A +V VVDHH +SDI+AT +I++VG+ +T++ E L+ +++ E +ATLL LG+H+DTGSLTF++ T R A
Sbjct: 69 LGVVLTHVSADFDTLSSAVGLAKL-RDHRLGAQCTCVVLPRGASPGVSHYLALHKNKFPIKEFRAVDASRLEWVGVVDAQRRDRLADCASWLDDAKDVVVVDHHALATSDIDATERIIQEVGATATVVAEMLEAEDVKITEEDATLLGLGIHTDTGSLTFEATTPRDA 235
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Match: A0A7S1FU56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU56_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.540e-44 Identity = 103/219 (47.03%), Postives = 130/219 (59.36%), Query Frame = 1
Query: 520 NTQALNVVLTHTTADFDTLAAAVGLAKLW--------------------QDERPDDECC--------------------VCLPRGTHPVVKRFLALHKNLFPIKALRDID-------HDRIFRVGLVDAQRIDRIGTAASLLANATEVHVVDHHNEQSSDI-NATSVVIEKVGSVSTIITEKLQERGLQMEEAEATLLALGVHSDTGSLTFDSATARYA 1032
+T NVVLTH ADFDTLA+AVGLAKLW ++ER + E V LPRG HP V+R+L++HK+LFPI+ L+ + R+ R+GLVDAQR DR+G A LL+ A V VVDHH ++ SDI AT V+E VGSVST++ E+L+ +Q+ EAEATLLALG+HSDTGSL F S TAR A
Sbjct: 74 STGKFNVVLTHCYADFDTLASAVGLAKLWSSKRELRRLDRRQSNTDGFEEEERGEREXXXXXXXXXERQDFEQGVIPTYVVLPRGAHPAVQRYLSMHKHLFPIRGLKSLPAGTPKGLESRLHRLGLVDAQRRDRVGPAEHLLSYANHVTVVDHHIDKESDIPEATDYVVEPVGSVSTMVVERLRAARVQLTEAEATLLALGIHSDTGSLCFGSTTARDA 292 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7728.18966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7728.18966.1 >prot_Ecto-sp13_S_contig7728.18966.1 ID=prot_Ecto-sp13_S_contig7728.18966.1|Name=mRNA_Ecto-sp13_S_contig7728.18966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp MCQRLAVPFLLIVQASLGYCPQNALRTTDTSAPSWLNGYPSARQRRSSHSback to top mRNA from alignment at Ecto-sp13_S_contig7728:513..4542- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7728.18966.1 ID=mRNA_Ecto-sp13_S_contig7728.18966.1|Name=mRNA_Ecto-sp13_S_contig7728.18966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4030bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7728:513..4542- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7728:513..4542- >mRNA_Ecto-sp13_S_contig7728.18966.1 ID=mRNA_Ecto-sp13_S_contig7728.18966.1|Name=mRNA_Ecto-sp13_S_contig7728.18966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7728:513..4542- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |