prot_Ecto-sp13_S_contig77274.18965.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77274.18965.1
Unique Nameprot_Ecto-sp13_S_contig77274.18965.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length100
Homology
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BLAST of mRNA_Ecto-sp13_S_contig77274.18965.1 vs. uniprot
Match: UPI001E34B712 (hypothetical protein n=1 Tax=Aurantimonas sp. VKM B-3413 TaxID=2779401 RepID=UPI001E34B712)

HSP 1 Score: 50.4 bits (119), Expect = 9.240e-6
Identity = 27/93 (29.03%), Postives = 44/93 (47.31%), Query Frame = 0 
Query:    1 MRVVDVLCLAAAIGGAAYVYNVKHEAEIAHDERRSLERDIGALSSXXXXXXXXXXALEQPARLQAVVSDLPDVFDLEPITSAHYVRISDIPFR 93
            +R +D++ +A  I  AA+ Y +KH+A+    E   LE+ I                L+QP RL+ +VS   D   L+P+     V   ++P R
Sbjct:    2 VRTLDIVLIAVMISAAAWTYKIKHDAQAIETEVNRLEKKIALQKETIQLLQADWTLLDQPGRLEDLVSAFADDLQLKPLQPNQIVEPDELPAR 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77274.18965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E34B7129.240e-629.03hypothetical protein n=1 Tax=Aurantimonas sp. VKM ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77274contigEcto-sp13_S_contig77274:229..528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77274.18965.1mRNA_Ecto-sp13_S_contig77274.18965.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77274 229..528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77274.18965.1 ID=prot_Ecto-sp13_S_contig77274.18965.1|Name=mRNA_Ecto-sp13_S_contig77274.18965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bp
MRVVDVLCLAAAIGGAAYVYNVKHEAEIAHDERRSLERDIGALSSDVGLL
EADLAALEQPARLQAVVSDLPDVFDLEPITSAHYVRISDIPFRSDLIIED
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