mRNA_Ecto-sp13_S_contig772.18958.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE) HSP 1 Score: 1444 bits (3738), Expect = 0.000e+0 Identity = 1310/1515 (86.47%), Postives = 1320/1515 (87.13%), Query Frame = 1
Query: 787 MRPKIEIHSTTGQTSRASAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEGGSYHRSRKAYIQNRGGISSGRESSASPHAAGTTGAVAAAAARIGEDGVPRPVGSHHVRRFSSAGEFSNGMIGGANAAGLDRYGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GGRPPLVRKRSLTVAMDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGRTTRLLESPSRPPRLMAVGNSGVAVVGGGVGGGVGACFSPLVSYPSSHGDRAGGGREYPLRSQAYDNLSVT-------------------TGCSSAGVGPETAAAAAAGGGVSKNPMDVEWIPNENAQAGGILPTPSPVTSVASTSSAMVQPSANANAMGRPPSPFPPSPGRDYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRSGVSKGVYVGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRTFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPEAGGPAAARGVLQQRGYPSPAQPSPLLLQRKGSSXXXGAMTPGSXXXX---SGA-LPFGSPGGVGIATGSTGRGPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGGGSSGGAMEKRPPTSPISPRSARRSTEPQQQSPRHRQPHGPVPVVSPRFSRAGQQHXXXXXXXXXXXXXXTSSSGRALSSPSASPPAGGVGGPSSPRYGRHEMAPRRTPPLPSQRGLSGVGGGVSXXXXXXXXXXRSXXXXXXAYSPXXXXXXXXXXXXXXXXXXXXQPLAIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 5244
M PKIEI S TGQTSRASAF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAEGGSYHRSRKAYIQNRGGISSGRESSASPHAA TTGAV+AAAARIGEDGVPRPVGS HVRRFSSAGEFSNG IG ANAAGLD YGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX GGRPPLVRKRSLTVAMDADPGGP MCPSPRGRRRSVEGVFDTKDS TSGGGSNPDG TTRLLESPSRPPRLMAVGNSGVAVVGGGVG ACFSPLVSYPSSHGDRAGGGREYPLRSQA+DNLSV T SSAGVG ETAAA A VSKNPMDVEWIPNENAQAGGILPTPSPVTSVAS AMVQPSANANAMGRPPSPFPPSPGR+YRR GGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSA RGVRSR GVSKGVYVGAGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQ RVPRDQGIASSPSPSPSMGVARPRGLDNQS REGMSSGGEDDEEEPWSAREVELLEALVR FGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXX SGA LPFGSPGGVG+ATGSTGRGPKGVGSWTKDED+RLN LV+IFGVKWSQISDHMPGRVGKQCRERYLNHLDPSL HGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETG+AGAGIGGGS+GGAME+RPPTSPISPRSAR STEPQQQSPRHRQ H PVPVV XXXX T SSGRALS PSASPPAG GPSSPRYGRHEM PRRTPPLPSQRGLSGVG XXXXXXXXXX XXXXXXAY+P XXXXXXXXXXXXXXXXXXX AIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA
Sbjct: 1 MCPKIEIDSATGQTSRASAFSAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----RAEGGSYHRSRKAYIQNRGGISSGRESSASPHAAATTGAVSAAAARIGEDGVPRPVGSRHVRRFSSAGEFSNGTIGSANAAGLDGYGGDVARDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVFNSYQRQDIASPSVGGGAGGDFTYTPLGXXXXXXXXXXXXXXXXGGRPPLVRKRSLTVAMDADPGGPVMCPSPRGRRRSVEGVFDTKDSCTSGGGSNPDGTTTRLLESPSRPPRLMAVGNSGVAVVGGGVG----ACFSPLVSYPSSHGDRAGGGREYPLRSQAHDNLSVRVSGHAMAGGGSNVNPVETKTDSSSAGVGLETAAAGAC---VSKNPMDVEWIPNENAQAGGILPTPSPVTSVASAPPAMVQPSANANAMGRPPSPFPPSPGREYRRVGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSATRGVRSRPGVSKGVYVGAGGA--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQTRVPRDQGIASSPSPSPSMGVARPRGLDNQSSREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAPLPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNDLVKIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGKAGAGIGGGSNGGAMERRPPTSPISPRSARWSTEPQQQSPRHRQSHAPVPVVXXXXXXXXXXXXXXXRQHPQD----TCSSGRALSPPSASPPAGSGVGPSSPRYGRHEMVPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXAYTPPXXXXXXXXXXXXXXXXXXXXS-AIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 1497
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI) HSP 1 Score: 1288 bits (3334), Expect = 0.000e+0 Identity = 994/1182 (84.09%), Postives = 1002/1182 (84.77%), Query Frame = 1
Query: 1741 MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGRTTRLLESPSRPPRLMAVGNSGVAVVGGGVGGGVGACFSPLVSYPSSHGDRAGGGREYPLRSQAYDNLSVTTGCSSAGVGPETAAAAAAGGGVSKNPMDVEWIPNENAQAGGILPTPSPVTSVASTSSAMVQPSANANAMGRPPSPFPPSPGRDYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRSGVSKGVYVGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------SDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRTFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPEAGGPAAARGVLQQRGYPSPAQPSPLLLQRKGSSXXXGAMTPGSXXXXSGALPFGSPGGVGIATGSTGRGPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGGGSSGG-AMEKRPPTSPISPRSARRSTEPQQQSPRHRQPHGPVPVVSPRFSRAGQQHXXXXXXXXXXXXXXTSSSGRALSSPSASPPAGGVGGPSSPRYGRHEMAPRRTPPLPSQRGLSGVGGGVSXXXXXXXXXXRSXXXXXXAYSPXXXXXXXXXXXXXXXXXXXXQPLAIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXX--QGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 5244
MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDG TTRLLESPSRPPRLMAVGN+GVAVVGGGVGGGVG CFSPLVSYPSSHGDRA GGREYPLRSQA+D SVT PSANANAMGRPPSPFPPSPGR+YRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSR GVSKGVYVGAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGV+RPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVR FGSGRWD+VSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QPEA GPAAARGVLQQRGYPSP QPSPLLLQRKGSSXXX XXXXSGALPFGSPGGVG+ATGSTGRGPKGVGSWTKDED+RLNALV IFGVKWSQISDHMPGRVGKQCRERYLNHLDPSL HGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGG AME+RPPTSPISPRSARRS EPQQQSPRHRQ HGPVPVVSPRFSRAGQQH XXXXXXXXXXXX PSSPRYGRHEMAPRRTPPLPSQRGLSGVG XXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXX PLAIPRSPASENFRN XXXXXXXXXXXXXXXXXXXXXX QGMAPEDADARRAAVAARMASNGGVAAWAWGGRA
Sbjct: 1 MDADPGGPAMCPSPRGRRRSVEGVFDTKDSSTSGGGSNPDGTTTRLLESPSRPPRLMAVGNNGVAVVGGGVGGGVGTCFSPLVSYPSSHGDRASGGREYPLRSQAHDKFSVT-------------------------------------------------------------PSANANAMGRPPSPFPPSPGREYRRAGGVLSRGSTHSPSPRRAPPSPAHAPGSAGMRRRGTRRLSGGRSAPRGVRSRPGVSKGVYVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYESDYDSDLSEMSAYSNYSAMGSLERQLQQDTFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVSRPRGLDNQSPREGMSSGGEDDEEEPWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAS--QPEARGPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXXXXXXXXXXXXSGALPFGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASVPPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGGXXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQHXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXPSSPRYGRHEMAPRRTPPLPSQRGLSGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWGGRA 1113
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA) HSP 1 Score: 161 bits (408), Expect = 8.770e-42 Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 1
Query: 3769 GPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRR 4077
G GVGSW+ +EDE+L LV +FG KW+QI HMPGRVGKQCRERYLNHLDPSL PWT EE+ LL LH ++NN WA+IARQ+PGR DNDVKNRWNL+ RR
Sbjct: 52 GRAGVGSWSPEEDEKLRTLVGMFGAKWAQICMHMPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI) HSP 1 Score: 163 bits (412), Expect = 1.150e-38 Identity = 131/468 (27.99%), Postives = 176/468 (37.61%), Query Frame = 1
Query: 2722 TFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSP--SPSMGVARPRGL--------DNQSPREGMSSGGEDDEEEPWSAREVELLEALVRTFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPEAGGPAAARGVLQQRGYPSPAQPSPLLLQRKGSSXXXGAMTPGSXXXXSGALPFGSPGGVGIATGSTGRGPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAE 4092
T F LD LW VV RR +C A+QC YR+ + + R+HYHA C+HVHQ G +KGMRF HHQLEKV+KHQR+H + + + I SS + SP+ A PR + R + E + W+ + L LV G +W ++ ++ T C W +G V P + KG G+WT +EDERL+ LV++ G+KWS ++ H+PGR+ KQCRERYLNHLDPSL PWTE+EE LL+ L NQWAEI RQ+ GRS NDV+NR+NL+ RR + A+
Sbjct: 112 TPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVG--------VNPDHMV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRRNKRAQ 400
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.500e-36 Identity = 131/471 (27.81%), Postives = 178/471 (37.79%), Query Frame = 1
Query: 2722 TFFELDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEE-------------EPWSAREVELLEALVRTFGSGRWDQVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPEAGGPAAARGVLQQRGYPSPAQPSPLLLQRKGSSXXXGAMTPGSXXXXSGALPFGSPGGVGIATGSTGRGPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHG-PWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAE 4092
T F LD LW VV RR +C A+QC YR+ + + R+HYHA C+HVHQ G +KGMRF HHQLEKV+KHQR+H + Q G +++ SP+ PR R +S G+ ++ + W+ + L LV G +W ++ ++ T C W +G V P+ + KG G+WT +EDERL+ LV++ G+KWS ++ H+PGR+ KQCRERYLNHLDPSL PWTE+EE LL+ L NQWAEI RQ+ GRS NDVKNR+NL+ RR + A+
Sbjct: 855 TPFMLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQNTQTS---SIGSSAAKPRSPTTVATAPRNK-----RVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGP-KWSNIADKMPGKTATACMLHWRVG--------VNPNHMV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRRNKRAQ 1138
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.890e-36 Identity = 67/107 (62.62%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 3775 KGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK 4095
+G+GSW+ +ED RL ALV + G KW+ ++ MPGRV KQCRERYLNHLDP L GPWT EEE++LL L N QWAEI RQ+PGRS NDVKNR+NL+ RR + A K
Sbjct: 18 RGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRLKRASK 124
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.640e-31 Identity = 119/451 (26.39%), Postives = 158/451 (35.03%), Query Frame = 1
Query: 2734 LDESLWRVVTRREICKAEQCVYRNPQTMVSHRKHYHATCSHVHQEGVKKGMRFHHHQLEKVKKHQRSHCSNQARVPRDQGIASSPSPSPSMGVARPRGLDNQSPREGMSSGGEDDEEEP--WSAREVELLEALVRTFGSGRWDQVSVHFNNRSPTQCARKW--ALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAGGVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPEAGGPAAARGVLQQRGYPSPAQPSPLLLQRKGSSXXXGAMTPGSXXXXSGALPFGSPGGVGIATGSTGRGPKGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCR 4074
LD LW V R E C + +C+Y++ T +S R+HYHATC H H+ G K GM FHHHQLEK++KHQR+H R L ++P E + + G + P W+ +E +L LV +G W +S ++ TQC W AL G TV KG G+W EDER+ +LVQIFG +WS +++HMPGR+ KQCRERYLN+LDP L G W+ EE+ LL L + N +A+IA QI GRS NDVKNRW+ + R
Sbjct: 552 LDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHI---------------------------RTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNA----TV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISR 795
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: D2UY60_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UY60_NAEGR) HSP 1 Score: 127 bits (319), Expect = 2.250e-30 Identity = 53/105 (50.48%), Postives = 77/105 (73.33%), Query Frame = 1
Query: 3784 GSWTKDEDERLNALVQIFGVK-WSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK 4095
G WT++ED ++ LV+ +G K WS I+ H+PGR+GKQCRER+ NHL+P ++ GPWTEEE+R++ H N+WA+IA+ +PGR+DN +KN WN RR+ E+
Sbjct: 6 GPWTQEEDNQVVELVKKYGAKKWSLIAQHLPGRIGKQCRERWHNHLNPDINKGPWTEEEDRIIYQAHKDYGNKWAQIAKLLPGRTDNAIKNHWNSTMRRKMERER 110
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.480e-30 Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 3775 KGVGSWTKDEDERLNALVQIFGVKWSQISDHMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRE 4080
KG GSWT +ED L + +G KW++I+ H+PGR GKQCRER++NHLDP L G WT++EE +L+++H N+WA I++Q+PGRSDNDVKN W +R+
Sbjct: 30 KGKGSWTAEEDAILREKRRQYGRKWAKIAAHLPGRQGKQCRERFVNHLDPELKKGEWTDDEEAILIAMHELHGNRWANISKQLPGRSDNDVKNHWYSTIQRK 131
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Match: A0A835YP08_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP08_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.710e-29 Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 3778 GVGSWTKDEDERLNALVQIFGVKWSQISD----HMPGRVGKQCRERYLNHLDPSLHHGPWTEEEERLLLSLHARLNNQWAEIARQIPG 4029
GVGSWT +EDE+L ALV ++G KW+Q S HMPGRVGKQCRER+LNHLDP L PWTE E+ LL+ LH +L+N WA+IAR IPG
Sbjct: 55 GVGSWTPEEDEKLKALVGVYGSKWAQASLFICLHMPGRVGKQCRERFLNHLDPKLKKTPWTEHEDSLLVELHQQLSNSWADIARHIPG 142 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig772.18958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig772.18958.1 >prot_Ecto-sp13_S_contig772.18958.1 ID=prot_Ecto-sp13_S_contig772.18958.1|Name=mRNA_Ecto-sp13_S_contig772.18958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1749bp MHHASLRMQQQQDGDNKSYATKRTPPAATATALAPGRPAAREPADPGSGGback to top mRNA from alignment at Ecto-sp13_S_contig772:8289..20649+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig772.18958.1 ID=mRNA_Ecto-sp13_S_contig772.18958.1|Name=mRNA_Ecto-sp13_S_contig772.18958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12361bp|location=Sequence derived from alignment at Ecto-sp13_S_contig772:8289..20649+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig772:8289..20649+ >mRNA_Ecto-sp13_S_contig772.18958.1 ID=mRNA_Ecto-sp13_S_contig772.18958.1|Name=mRNA_Ecto-sp13_S_contig772.18958.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=5247bp|location=Sequence derived from alignment at Ecto-sp13_S_contig772:8289..20649+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |