prot_Ecto-sp13_S_contig772.18957.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig772.18957.1
Unique Nameprot_Ecto-sp13_S_contig772.18957.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length262
Homology
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 8.350e-174
Identity = 247/261 (94.64%), Postives = 254/261 (97.32%), Query Frame = 0
Query:    1 MERDMAGGRTRALFPHLNRRRASASVWLVACGALFGVLLSAEIMKYLARLRSSTVEPGDGEESIAWELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVELHPAMTKW 261
            MERD+AGG+TRALFP+L RR ASASVWLVACGAL GVLLS EIMKYLARLRSS+VEPGDGEESIAWELVEDSGGFRTFSSRVQGSSSL LRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQ SSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIV+RTSW+LTSLG SKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETV+GFVSSARNVELHPAMTKW
Sbjct:    1 MERDVAGGKTRALFPYLYRRGASASVWLVACGALLGVLLSPEIMKYLARLRSSSVEPGDGEESIAWELVEDSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVAGFVSSARNVELHPAMTKW 261          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 5.200e-71
Identity = 110/113 (97.35%), Postives = 113/113 (100.00%), Query Frame = 0
Query:  149 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVELHPAMTKW 261
            MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAM+GF+QVKFPRETV+GFVSSARNVELHPAMTKW
Sbjct:    1 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMIGFMQVKFPRETVAGFVSSARNVELHPAMTKW 113          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A4D9CVN7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVN7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.580e-23
Identity = 55/175 (31.43%), Postives = 95/175 (54.29%), Query Frame = 0
Query:   87 SLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVELHPAMTKW 261
            ++ LRG+ +VD HI  + T FLNT+ + +WV +L   EELPT       G  +  +++Q +DMP P+ DRE ++RR+V  D+R   + A Y S +H ++P   + VR    +T W   + G  +T I+ E+  +PK  +   +V  +Q  + R ++   +   +  + HP+   W
Sbjct:  161 TISLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPT-------GQENAHIIYQFFDMPLPLSDREFLMRRTVVSDRRKGTVWAHYASVEHASKPRRRSVVRGETCKTLWTFLAKGKDQTVIQVESSLNPKLPVNGWLVQMMQNTYQRASLLAMLDLIKRAKPHPSFVHW 328          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A2E7UXM6_9DELT (START domain-containing protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UXM6_9DELT)

HSP 1 Score: 90.5 bits (223), Expect = 5.540e-18
Identity = 65/231 (28.14%), Postives = 105/231 (45.45%), Query Frame = 0
Query:   43 IMKYLARLRSSTVEPGDGEESIA-------WELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSV-RLDKRAKKMIASYQSTDHPARPITSAT--VRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARN--VELHPAMTKW 261
            +MK LA LR+     G G            W  + +  G  ++   V+G      RG TTV+  +  L + +++ +    WV  L E E +               +++Q++DMPWPV DRE +++ +V R D+R  K ++   +TD    P T     VR ++  +SW  T L  S+T ++     DP G+ P+ ++  +Q  FP  T+S F   A N  V L      W
Sbjct:   35 MMKGLATLRTWAGAVGLGVVGTVGFAGTADWTRIGEKDGITSYLRPVEGERVEATRGVTTVNVPLCELISFYVDPSLATTWVDMLTEYEVIELNARQ--------SIVWQRFDMPWPVADREFLLQVNVTRPDERTVK-VSLVSTTDPRFPPPTDGDGLVRGVMSPSSWTFTRLSESRTKVDMVGHADPSGAFPAWLINIIQQTFPYNTLSAFAREAENGKVPLRSECADW 256          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A496XU05_9PROT (START domain-containing protein n=1 Tax=Epsilonproteobacteria bacterium TaxID=2026809 RepID=A0A496XU05_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 8.880e-16
Identity = 50/176 (28.41%), Postives = 95/176 (53.98%), Query Frame = 0
Query:   66 WELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRET 241
            WE + +  G + +++ V G++    +GET +++ I ++    ++      WV+ L +V ++  + S          +++Q+ ++PWP+K+R+ V    +   ++ K +I   +S  H   P T   +R  +  + +VLTSLG SKT IE E  TDPKG +P  +V  +Q ++P +T
Sbjct:   23 WEEISNKDGIKVYTASVPGTTVKGFKGETIMNDSIEKILYVIMDDEHRSKWVKRL-KVSKMLEEISDYEA------IMYQEIELPWPLKNRDFVFWGKIERPEKGK-VILKMKSVKHKDAPKTVG-IRGELLLSKYVLTSLGKSKTKIEVEILTDPKGLIPKWLVNMIQAQWPYKT 189          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A2E8I5A3_9PROT (START domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E8I5A3_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 1.300e-15
Identity = 53/195 (27.18%), Postives = 93/195 (47.69%), Query Frame = 0
Query:   60 GEESIAWELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVEL 254
            G +  +W  +         +  V GS  L+++G TT++  I +++T  ++     +WV  L+ +  L         G  D  +     DMPWPVKDR+ VIR  +  D  A ++IAS  ++     P     +RA  H ++  L ++  ++T IE   R DPKGSLP  +V + Q ++   T+     +   +++
Sbjct:   25 GTDLNSWRQITQEDSINVQAKSVPGSDLLLVKGTTTLNHSIEKIFTLAIDHQLRKEWVDRLIHIRRL-----KEVDGKLDA-IAHYVVDMPWPVKDRDFVIRTRITFDP-ATEIIASESASIPGFMPEQDNIIRATSHNSTVKLKAINPTETRIEVTARIDPKGSLPIFLVNYFQKRWAHSTLLSLRDALERLDI 212          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: UPI001D17CC2B (START domain-containing protein n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001D17CC2B)

HSP 1 Score: 83.2 bits (204), Expect = 2.150e-15
Identity = 63/188 (33.51%), Postives = 87/188 (46.28%), Query Frame = 0
Query:   66 WELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVE 253
            W+L E+S G R +++ V GS     R    +D    RL    +N  S  +WV   VE E     GS   GG GD    +   DMPWPV+DR+ VIR     ++ A  ++  Y S    ARP     +R     T +    LG  +T + +   T+P GS+PS +V  L V  P       V S RN+E
Sbjct:   34 WQLREESDGIRIYTTAVPGSDFEAFRAVADLDASTSRLMAVLVNPASCTEWVHNCVESEAF---GS---GGFGDR-YAYSVNDMPWPVQDRDYVIRIRTHGEQ-ASGVVDMYLSAVPGARPERDDYIRVDQSDTHYRFEPLGPERTRLTWVQHTEPNGSIPSWLVNSLVVDIP-------VKSIRNLE 206          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A3D2C9X1_9DELT (START domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3D2C9X1_9DELT)

HSP 1 Score: 80.9 bits (198), Expect = 1.030e-14
Identity = 56/203 (27.59%), Postives = 90/203 (44.33%), Query Frame = 0
Query:   66 WELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVE---VEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTD--HPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARN--VELHPAMTKW 261
            WEL+ +  G  T+   V G      RG  +VD    +L + +++      WV  L E   V+  P Q            +++Q+YDMPWPV DR+ ++  +V +       +A   +TD   P        VR  +  +SW  T +  ++T ++     DP G+ P+ +V  +Q  FP  T+S FV  A +  V L      W
Sbjct:   28 WELIGEKDGISTYLRPVAGEPIQAARGVMSVDVPACQLISFYVDPKLATTWVDMLAEYTIVDIGPRQS-----------LVWQRYDMPWPVSDRDFLLDVTVTMPDPQTIKVALVSTTDPRFPPPGDDDDIVRGRMSPSSWTFTRISDTRTKVDMVGHVDPSGAFPAWLVNLIQHNFPYNTLSAFVREAGHGKVTLRSECADW 219          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A7S4E3Y4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3Y4_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.840e-12
Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = 0
Query:   66 WELVEDSGGFRTFSSRVQGSSSL-VLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSARNVELHP--AMTKW 261
            W +V  + G  T  +R+  +S L  + GE  V+  +  L + F +      W   LV+  E          G+  G  ++Q++  PWPV+DRE+V+RR  R  +R + +   ++S D    P+    VR + H   W  T++  ++T I   +  DP G++P+        ++ +  +   V +AR + L P  A   W
Sbjct:   27 WRVVSAAKGVTT-RARIDATSQLCAVHGEAVVEASVAELMSVFGDLDQHGHWDATLVDAREWT--------GADGGTYVYQRFKQPWPVRDRELVLRR--REWRRNQTVSVHFESVDE-GTPVAPGAVRTLAHTVWWNFTAVSETETLISHYSCVDPGGAIPAWARDLAVQRWCQSQILALVDTARRLGLRPVPAFASW 213          
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Match: A0A1V1PFS1_9DELT (Lipid-binding START domain protein n=1 Tax=Candidatus Magnetoglobus multicellularis str. Araruama TaxID=890399 RepID=A0A1V1PFS1_9DELT)

HSP 1 Score: 72.8 bits (177), Expect = 1.500e-11
Identity = 43/179 (24.02%), Postives = 79/179 (44.13%), Query Frame = 0
Query:   66 WELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSG 244
            W+      G   +S RV+G++ L +R  T VD  +  +     +  + ++W    VE   L     +           + + D+PWPV DR+V+I+    ++ +  + + S  + DH   P  +  VR     + + L  +   +T I F TR +P G +P+ +V     +F  E + G
Sbjct:   26 WQPAIKKNGIDAYSRRVEGTNILEIRAITVVDARMEVIAEVLRDIPANVEWRPKCVECRLLERHNRNAM-------TTYTRIDLPWPVSDRDVIIKADTSINLKTGRAVVSLGAVDHHKAPPPNENVRITEFFSQYYLEYINREQTGIIFTTRVNPAGRIPTFLVNMFNKRFAYEEMLG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig772.18957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Z4_ECTSI8.350e-17494.64START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2R4_9PHAE5.200e-7197.35START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9CVN7_9STRA2.580e-2331.43START domain-containing protein n=2 Tax=Monodopsid... [more]
A0A2E7UXM6_9DELT5.540e-1828.14START domain-containing protein n=2 Tax=Deltaprote... [more]
A0A496XU05_9PROT8.880e-1628.41START domain-containing protein n=1 Tax=Epsilonpro... [more]
A0A2E8I5A3_9PROT1.300e-1527.18START domain-containing protein n=1 Tax=Bdellovibr... [more]
UPI001D17CC2B2.150e-1533.51START domain-containing protein n=2 Tax=Marinobact... [more]
A0A3D2C9X1_9DELT1.030e-1427.59START domain-containing protein n=1 Tax=Deltaprote... [more]
A0A7S4E3Y4_9STRA3.840e-1226.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V1PFS1_9DELT1.500e-1124.02Lipid-binding START domain protein n=1 Tax=Candida... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 64..256
e-value: 1.7E-28
score: 101.1
IPR002913START domainPFAMPF01852STARTcoord: 138..229
e-value: 1.5E-8
score: 34.3
IPR002913START domainPROSITEPS50848STARTcoord: 66..230
score: 14.435
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 115..239
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 115..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 62..244
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig772contigEcto-sp13_S_contig772:3728..7043 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig772.18957.1mRNA_Ecto-sp13_S_contig772.18957.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig772 2771..7200 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig772.18957.1 ID=prot_Ecto-sp13_S_contig772.18957.1|Name=mRNA_Ecto-sp13_S_contig772.18957.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
MERDMAGGRTRALFPHLNRRRASASVWLVACGALFGVLLSAEIMKYLARL
RSSTVEPGDGEESIAWELVEDSGGFRTFSSRVQGSSSLVLRGETTVDEHI
GRLYTAFLNTTSTLDWVRFLVEVEELPTQGSSRRGGSGDGDVLFQKYDMP
WPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTS
WVLTSLGGSKTSIEFETRTDPKGSLPSAMVGFLQVKFPRETVSGFVSSAR
NVELHPAMTKW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom