prot_Ecto-sp13_S_contig7718.18956.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7718.18956.1
Unique Nameprot_Ecto-sp13_S_contig7718.18956.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length467
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7718.18956.1 vs. uniprot
Match: A0A6H5KD05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD05_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 7.490e-179
Identity = 328/365 (89.86%), Postives = 334/365 (91.51%), Query Frame = 0 
Query:  101 SKPVPKTKFSKRASRGLKAAPAYMSFDDVDVEADDDSDGELFVEDSRDN--RGSGAARSPGSVAAQAASSKSASAYTVNAPSVYRAPSLAPPAXXXXXXXXXSDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAVVSAKENMSSHRAIAGDSSAEIWSSGSGLRGGLAGGLRLGGEQRVMSIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATDTLTINPGADVSDPRTKHAGAAGPTPSSVRFTPREMEVSSEIGSTMTPVGREQQQHYXXXXXXXXXALGMDIDGREDDVXXXXXXXXXXXXXXXXXXXXXXXYQQPVISPSGTTSMEMATGLRPPEPRGRAVQAE 463
            SKPVPKTKFSKRASRGLKAA AYMSFDDVDVE DDDSDGELFVEDSRDN  R SGAARSP S AAQAASSKSASAYTVNAPSVYRAPSLAPP XXXXXXXX SDAP GGPEDQ+GYSAAAAGRG  DGSSGVPVA VSAKENMSSHRAIAGDSSAEIWSSGSGLRGGLAGGLRLGGEQRV SIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATD LTINPGADVSDPRT HAGAAGPTPSSVRFTPREMEVSS IGS+MTPV RE+QQHY XXXXXXXXA GMDIDGR++ V    XXXXXXXXXXXXXXXXX    QPVISPSGTTSMEMATGLRPPEPRGRA + E
Sbjct:   20 SKPVPKTKFSKRASRGLKAASAYMSFDDVDVE-DDDSDGELFVEDSRDNDKRASGAARSPVSFAAQAASSKSASAYTVNAPSVYRAPSLAPPXXXXXXXXXSSDAPTGGPEDQDGYSAAAAGRGGSDGSSGVPVAAVSAKENMSSHRAIAGDSSAEIWSSGSGLRGGLAGGLRLGGEQRVTSIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATDALTINPGADVSDPRTTHAGAAGPTPSSVRFTPREMEVSSGIGSSMTPVEREEQQHYQXXXXXXXXASGMDIDGRDEYVEEQQXXXXXXXXXXXXXXXXX----QPVISPSGTTSMEMATGLRPPEPRGRAAEVE 379
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BLAST of mRNA_Ecto-sp13_S_contig7718.18956.1 vs. uniprot
Match: D8LTK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK7_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 3.800e-133
Identity = 232/242 (95.87%), Postives = 234/242 (96.69%), Query Frame = 0 
Query:  124 MSFDDVDVEADDDSDGELFVEDSRDNRGSGAARSPGSVAAQAASSKSASAYTVNAPSVYRAPSLAPPAXXXXXXXXXSDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAVV-SAKENMSSHRAIAGDSSAEIWSSGSGLRGGLAGGLRLGGEQRVMSIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATDTLTINPGADVSDPRTKHAGAAGPTPSSVRFTPREM 364
            MSFDDVDVE DDDSDGELFVEDSRDNRGSGA+RSPGSVAAQAASSKSASAYTVNAPSVYRAPSLAP  XXXXXXXXXSDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAV  SAKENMSSH+AIAGDSSAEI SSGSGLRGGLAGGLRLGGEQRVMSIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATD LTINPGADVSDPRTKHAGAAGPTPSSVRFTP EM
Sbjct:    1 MSFDDVDVE-DDDSDGELFVEDSRDNRGSGASRSPGSVAAQAASSKSASAYTVNAPSVYRAPSLAPXXXXXXXXXXXSDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAVAASAKENMSSHQAIAGDSSAEILSSGSGLRGGLAGGLRLGGEQRVMSIPRDGSMLESARPHGQSESFHGYKGYPGYEPDTPVAQQLTQPGRAHATDALTINPGADVSDPRTKHAGAAGPTPSSVRFTPMEM 241
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7718.18956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD05_9PHAE7.490e-17989.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTK7_ECTSI3.800e-13395.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7718contigEcto-sp13_S_contig7718:2892..7013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7718.18956.1mRNA_Ecto-sp13_S_contig7718.18956.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7718 2892..7013 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7718.18956.1 ID=prot_Ecto-sp13_S_contig7718.18956.1|Name=mRNA_Ecto-sp13_S_contig7718.18956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=467bp
LRPTRNRQGASQTVTLSSKPGSQQQLAGGNGTTATPSIASEAAAPRAAAA
AAAADAAAAPAPTVSASTPAAAAPAAAAAGTEPSAAPAPAPAAAAAAAAV
SKPVPKTKFSKRASRGLKAAPAYMSFDDVDVEADDDSDGELFVEDSRDNR
GSGAARSPGSVAAQAASSKSASAYTVNAPSVYRAPSLAPPAAAAPAAPAS
SDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAVVSAKENMSSHRAIAGD
SSAEIWSSGSGLRGGLAGGLRLGGEQRVMSIPRDGSMLESARPHGQSESF
HGYKGYPGYEPDTPVAQQLTQPGRAHATDTLTINPGADVSDPRTKHAGAA
GPTPSSVRFTPREMEVSSEIGSTMTPVGREQQQHYQQQQYQQEQALGMDI
DGREDDVEEQQQQQQQQQHQSRQRRRQQRQYQQPVISPSGTTSMEMATGL
RPPEPRGRAVQAEVGG*
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