prot_Ecto-sp13_S_contig7710.18949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7710.18949.1
Unique Name	prot_Ecto-sp13_S_contig7710.18949.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	887

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7710.18949.1 vs. uniprot
Match: D8LPR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR6_ECTSI)

HSP 1 Score: 627 bits (1618), Expect = 1.480e-200
Identity = 427/489 (87.32%), Postives = 432/489 (88.34%), Query Frame = 0

Query:  401 GRALYGLSTWSFGSXXXXXXXXGSVSHEAAPKPSAGWNSKDGKPTPAESFSYHGANGRMKADDVDNRRGDQIQQQQQQR--GNKRGSFRTEGPGVVSTSTTSSATTATAVWRNFIPRRGSRFLVGANQAHTQSRDQPPERSSEMGEDEERRKRNMSNSTTTNEVDDLGPSGSITHGASGRRRGSCNGARGAGGHQKRHQEWLDKFGEEKRMERQKEEAKTQRXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXSATTGHDVSADEGGDGMKISAAAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWAARHSKVERKGSKDDVTPEERKKLEKERFERIAATRRRQKEHHKRFLAALKAKRVQEEEDRLLHERKEAEKRCNVKMWAERRLRKTQKVAGGGDTEHLSATAATTAVGHNNSVGGRGSSDGGDGAREGVYGEGAGAAATEGVAGSGLNAIRSAHSR 887
            GRALYGLSTWSFGSXXXXXXXX S SHEAAPKPSAGWNSKDGKPTPAESFSYHGANGRMKADDVDNRRGDQ          GNKRGSFR E PGVVSTS            RN IPRRG RF VGANQAHTQSRDQPPERS+EMGEDEERRKRNMSNSTTTN VDDLGPSGSITHGASGRRRGSCNG RGAGGHQKRHQEWLDKFGEEKRMERQ        XXXXXXXXXX XXXXXXXXXXXXXXXXX       SATTGHD+SADEGGDG+KIS AAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWAARHSKVERKG+KDDVTPEERKKLEKERFERIAATRRRQKEHHKRFLAALKAKRVQEEEDRLLHERKEAEKRCNVKMWAERRL+KTQK AGGGDTEHLSA A TTA GHN  VGGRGSSDGGDGAREGV GEGA A ATEGVAGSGLNAIRSAHSR
Sbjct:   17 GRALYGLSTWSFGSXXXXXXXXXSDSHEAAPKPSAGWNSKDGKPTPAESFSYHGANGRMKADDVDNRRGDQXXXXXXXXXXGNKRGSFRMERPGVVSTSXXXXXXXXXXARRNSIPRRG-RFFVGANQAHTQSRDQPPERSAEMGEDEERRKRNMSNSTTTNVVDDLGPSGSITHGASGRRRGSCNGGRGAGGHQKRHQEWLDKFGEEKRMERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSGAGSSATTGHDLSADEGGDGVKISTAAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWAARHSKVERKGNKDDVTPEERKKLEKERFERIAATRRRQKEHHKRFLAALKAKRVQEEEDRLLHERKEAEKRCNVKMWAERRLQKTQKAAGGGDTEHLSAAAVTTAPGHNKWVGGRGSSDGGDGAREGVDGEGAAATATEGVAGSGLNAIRSAHSR 504

[Close]

BLAST of mRNA_Ecto-sp13_S_contig7710.18949.1 vs. uniprot
Match: A0A6H5KWY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWY7_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 4.510e-118
Identity = 295/373 (79.09%), Postives = 302/373 (80.97%), Query Frame = 0

Query:  515 RRGSRFLVGANQAHTQSRDQPPERSSEMGEDEERRKRNMSNSTTTNEVDDLGPSGSITHGASGRRRGSCNGARGAGGHQKRHQEWLDKFGEEKRMERQKEEAKTQRXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXSATTGHDVSADEGGDGMKISAAAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWAARHSKVERKGSKDDVTPEERKKLEKERFERIAATRRRQKEHHKRFLAALKAKRVQEEEDRLLHERKEAEKRCNVKMWAERRLRKTQKVAGGGDTEHLSATAATTAVGHNNSVGGRGSSDGGDGAREGVYGEGAGAAATEGVAGSGLNAIRSAHSR 887
            R   RFLVGANQAH QSRDQPPERSSEMGEDE        NSTTTN VDDLGPSGSITHGASGRRRGSCNG RG GGHQKRHQEWLDKFGEEKRMERQ+       XXXXXXXXXX XXXXXXXXXXXXXXXXX       SATTGHD+SADEGGDG+KISAAAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWA RH KVERKG+KDDVTPEERKKLEKE                                DRLLHERKEAEKRCNVKMWAERRL+K  K AGGGDTEHLS+ A TTA GHN SVGGRGSS+GGDGAREGVYGEGAGAAATEGVAGSGLNAIRSAHSR
Sbjct:    4 RSNIRFLVGANQAHAQSRDQPPERSSEMGEDEXXXXXXXXNSTTTNLVDDLGPSGSITHGASGRRRGSCNGGRGVGGHQKRHQEWLDKFGEEKRMERQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSGAGSSATTGHDLSADEGGDGVKISAAAREASHQARGGAGQXXXXXXXXXXXXXXXXXXXXXXXTMAAMSAGVPLYAQETWAVRHGKVERKGNKDDVTPEERKKLEKE--------------------------------DRLLHERKEAEKRCNVKMWAERRLQK--KAAGGGDTEHLSSAAVTTAAGHNKSVGGRGSSEGGDGAREGVYGEGAGAAATEGVAGSGLNAIRSAHSR 342

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7710.18949.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7710.18949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LPR6_ECTSI	1.480e-200	87.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KWY7_9PHAE	4.510e-118	79.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 606..629
None	No IPR available	COILS	Coil	Coil	coord: 224..244
None	No IPR available	COILS	Coil	Coil	coord: 783..803
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 704..727
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 728..887
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..703

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7710	contig	Ecto-sp13_S_contig7710:1..7316 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7710.18949.1	mRNA_Ecto-sp13_S_contig7710.18949.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7710 1..7316 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7710.18949.1 ID=prot_Ecto-sp13_S_contig7710.18949.1|Name=mRNA_Ecto-sp13_S_contig7710.18949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=887bp
CDAVGSSPSSPTSLALSLALVTSKHETSEGTKEEGKGEGKARKAPPTFSS
IDEWLKEDQKGKSSTTSDQDHYTPTSGCHATGGSGTDNRRLQDVNHNSDA
IGDDGDQNKNLPSPLLPGSMSLAPYAEEKSSAGGLQGLSPGPGQDTYAAK
FRSPYPNSQQPSTVAEQSILSAFDATSPVCGRTWGNGSFVSPGAASVQTA
SSLCLNDEGEETDSKRIGAWGEEEEEEEEQEEEEEEDVQVIRGKDDGVHE
ETTEGESDNMEVAEEEDDEKGTPRGEAWEKAHEEARAEEKGPVRRRHEEL
SFPHGGSRGAVVAAAACSPEKYSVGDSPISGQERGSATSLFLGLLDSEAS
GDAWGADDTPRLDDYFRGQATAPPLEGQLLPPPFGGGMDGSPLFPSPPLE
GRALYGLSTWSFGSGSGGGGNGGSVSHEAAPKPSAGWNSKDGKPTPAESF
SYHGANGRMKADDVDNRRGDQIQQQQQQRGNKRGSFRTEGPGVVSTSTTS
SATTATAVWRNFIPRRGSRFLVGANQAHTQSRDQPPERSSEMGEDEERRK
RNMSNSTTTNEVDDLGPSGSITHGASGRRRGSCNGARGAGGHQKRHQEWL
DKFGEEKRMERQKEEAKTQRQEAARRRTRDLLLEKAKERLLAVAAAAAGG
SGAGSSATTGHDVSADEGGDGMKISAAAREASHQARGGAGQGVPTPTASC
EGGAGVAVAAAAAMTMAAMSAGVPLYAQETWAARHSKVERKGSKDDVTPE
ERKKLEKERFERIAATRRRQKEHHKRFLAALKAKRVQEEEDRLLHERKEA
EKRCNVKMWAERRLRKTQKVAGGGDTEHLSATAATTAVGHNNSVGGRGSS
DGGDGAREGVYGEGAGAAATEGVAGSGLNAIRSAHSR