mRNA_Ecto-sp13_S_contig771.18948.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig771.18948.1
Unique Name	mRNA_Ecto-sp13_S_contig771.18948.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig771.18948.1 vs. uniprot
Match: A0A6H5J7S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S5_9PHAE)

HSP 1 Score: 614 bits (1584), Expect = 1.780e-200
Identity = 414/532 (77.82%), Postives = 426/532 (80.08%), Query Frame = 2

Query:   11 MPQFGRRLSASSTPAERRSAIAATRRSSAFCQQRRPAEYRDSAQDXXXXXXXXXAEEDFKRPRAVSPSALPPSGPEVDDLXXXXXXXXXXXXXXXATVLAGPGGYLCSSPRLTMEKAAPAAREEDRQGVGSRGYVRARALCFQPEERKERDVEDQITCQQRYENNKRFFGCSLTT---EGQXXXXXXXXXXXXXXXXXXXSVSSTISEPMDIPGARSTSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGCSPPGSAPPLDSPLYAASPRPXXXXXXXXXMDAFPSRRNKASGLAGTPDVRGGGLLPAARASGRYPLPPVTPESGSGSRLPTTATVRXXXXXXXXXXXXXAAVP----------TSPGGGDASRLGGNDAATGGGCAKTDPGPSRPASSIPRPDGRFSCHRYQQPGEEEVVGHGDEILXXXXXXXXXXEVPPRGYSWGQLSRMPLEEAGRKLGTFSAKGFSTSGGXXXXXXXXDGRGCLDVSDCEEGGGGCAAGGFEDDLADNSDSDLELSEGLMFDLEM 1567
            MPQFGRRLSASSTPA RRSAIAATRRSSAFCQ+RRPAEYRD AQD         AEEDFKRPRAVSPSAL P GPEVDDL XXXXXXXXXXXXXX    AGPGGYLCSS RL MEKAAPAARE+D QGVGSRGYVRARA CFQPEERKERDVEDQITC  RYENNKRFFGC LTT   E  XXXXXXXXXXXXXXXXXXX    T+SEP+DIPGAR+             DEEGWVSLWNTYTRLFPGTFTGCSPP S PPLDSPLYAASPR          MDA PSRRNKASG AGTPDVRGGGLLPAARASG YPLPP TPESGSGSRL TTATVRXXXXXXXXXXXXX              + PG  DA+      AATGGGCAKTDPGPS PA S PRPDG FSCH+YQQPGEEEVVGH DE+L  XXXXXXXXEV PRGYSWG+LS MPLEEAGRKLGTFSAKGFST G    XXXXXDGRGCLDVS C+EGGGGCAA   EDDL DNSD+DLELSEGLMFDLEM
Sbjct:    1 MPQFGRRLSASSTPAARRSAIAATRRSSAFCQERRPAEYRDGAQDPPDAAAAAPAEEDFKRPRAVSPSALSPGGPEVDDLVXXXXXXXXXXXXXXXXX-AGPGGYLCSSTRLMMEKAAPAAREQDWQGVGSRGYVRARAPCFQPEERKERDVEDQITC--RYENNKRFFGCGLTTAHCEEXXXXXXXXXXXXXXXXXXXXXXXXTMSEPVDIPGARTXXXXXXXXXXXXXDEEGWVSLWNTYTRLFPGTFTGCSPPRSTPPLDSPLYAASPR-----APPPPMDASPSRRNKASGTAGTPDVRGGGLLPAARASGGYPLPPATPESGSGSRLRTTATVRXXXXXXXXXXXXXXXXXXXXXXXXXXASLPGENDAAAT---VAATGGGCAKTDPGPSLPALSTPRPDGWFSCHQYQQPGEEEVVGHVDEMLLDXXXXXXXXEVLPRGYSWGRLSLMPLEEAGRKLGTFSAKGFSTGG----XXXXXDGRGCLDVSVCQEGGGGCAAVNSEDDLDDNSDADLELSEGLMFDLEM 517

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BLAST of mRNA_Ecto-sp13_S_contig771.18948.1 vs. uniprot
Match: D8LHR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR4_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 2.660e-159
Identity = 320/418 (76.56%), Postives = 333/418 (79.67%), Query Frame = 2

Query:  350 MEKAAPAAREEDRQGVGSRGYVRARALCFQPEERKERDVEDQITCQQRYENNKRFFGCSLTTEGQXXXXXXXXXXXXXXXXXXXSVSSTISEPMDIPGARSTSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGCSPPGSAPPLDSPLYAASPRPXXXXXXXXXMDAFPSRRNKASGLAGTPDVRGGGLLPAARASGRYPLPPVTPESGSGSRLPTTATVRXXXXXXXXXXXXXAAVPTSPGGGDASRLGGNDAATGGG---------CAKTDPGPSRPASSIPRPDGRFSCHRYQQPGEEEVVGHGDEILXXXXXXXXXXE-VPPRGYSWGQLSRMPLEEAGRKLGTFSAKGFSTSGGXXXXXXXXDGRGCLDVSDCEEGGGG--CAAGGFEDDLADNSDSDLELSEGLMFDLEM 1567
            MEK  P AREE+RQGVGSRGYVRARALCFQPEE+KER+VEDQI CQQ++EN KRFFGCS+ T       XXXXXXXXXXXXXXXSVSST+SEP+DIPGARSTSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGCSPPGSAPPLDSPLYAASP       XXXXM+A+PSRRNKASG+AGTPDVRGGGLLPAARAS  YPLPPVTPES SGSRLPTTATVR              AVPTSP                           CA+TDPGPSRPASS PRPDGR SC RYQQPGEEEVVGHGD   XXXXXXXXX   VPPRG SWGQLSRMPLEEAGRKLGTFSAKGFST G  XXXXXXXDGRG LDVSDCEEG     CAAG FEDDL DNSD+DLELSEGLMFDLEM
Sbjct:    1 MEKVVPGAREENRQGVGSRGYVRARALCFQPEEQKEREVEDQIICQQQHEN-KRFFGCSVKTAHCDGQQXXXXXXXXXXXXXXXSVSSTMSEPVDIPGARSTSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGCSPPGSAPPLDSPLYAASPX------XXXXMNAYPSRRNKASGMAGTPDVRGGGLLPAARASDGYPLPPVTPESSSGSRLPTTATVRRRPRYQRRPST--VAVPTSPXXXXXXXXXXXXXXXXXXXXXXXXXXXCARTDPGPSRPASSTPRPDGRSSCRRYQQPGEEEVVGHGDXXXXXXXXXXXXDVGVPPRGCSWGQLSRMPLEEAGRKLGTFSAKGFSTGG--XXXXXXXDGRGYLDVSDCEEGXXXXXCAAGSFEDDLGDNSDADLELSEGLMFDLEM 407

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig771.18948.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig771.18948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J7S5_9PHAE	1.780e-200	77.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LHR4_ECTSI	2.660e-159	76.56	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig771	contig	Ecto-sp13_S_contig771:7974..16026 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	5162
Hectar predicted targeting category	mitochondrion
Exons	4
Cds size	1560

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig771.18948.1	prot_Ecto-sp13_S_contig771.18948.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig771 7984..12210 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464041.945241-UTR-Ecto-sp13_S_contig771:7973..7983	1681464041.945241-UTR-Ecto-sp13_S_contig771:7973..7983	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig771 7974..7983 +
1681464041.988031-UTR-Ecto-sp13_S_contig771:12210..12444	1681464041.988031-UTR-Ecto-sp13_S_contig771:12210..12444	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig771 12211..12444 +
1681464041.9986002-UTR-Ecto-sp13_S_contig771:12668..16026	1681464041.9986002-UTR-Ecto-sp13_S_contig771:12668..16026	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig771 12669..16026 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464041.9554365-CDS-Ecto-sp13_S_contig771:7983..8457	1681464041.9554365-CDS-Ecto-sp13_S_contig771:7983..8457	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig771 7984..8457 +
1681464041.9663465-CDS-Ecto-sp13_S_contig771:9055..9268	1681464041.9663465-CDS-Ecto-sp13_S_contig771:9055..9268	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig771 9056..9268 +
1681464041.9776223-CDS-Ecto-sp13_S_contig771:11337..12210	1681464041.9776223-CDS-Ecto-sp13_S_contig771:11337..12210	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig771 11338..12210 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig771:7974..16026+
coding sequence from alignment at Ecto-sp13_S_contig771:7974..16026+

protein sequence of mRNA_Ecto-sp13_S_contig771.18948.1

>prot_Ecto-sp13_S_contig771.18948.1 ID=prot_Ecto-sp13_S_contig771.18948.1|Name=mRNA_Ecto-sp13_S_contig771.18948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=520bp
MPQFGRRLSASSTPAERRSAIAATRRSSAFCQQRRPAEYRDSAQDPPGAA
AAAPAEEDFKRPRAVSPSALPPSGPEVDDLVAAAAAAAASKELAAATVLA
GPGGYLCSSPRLTMEKAAPAAREEDRQGVGSRGYVRARALCFQPEERKER
DVEDQITCQQRYENNKRFFGCSLTTEGQQQQQQQSKGGAAPLLRNNSSVS
STISEPMDIPGARSTSSSVESGGGAGADEEGWVSLWNTYTRLFPGTFTGC
SPPGSAPPLDSPLYAASPRPPPPPPPPPPMDAFPSRRNKASGLAGTPDVR
GGGLLPAARASGRYPLPPVTPESGSGSRLPTTATVRRRRRRLNQRRPSTA
AVPTSPGGGDASRLGGNDAATGGGCAKTDPGPSRPASSIPRPDGRFSCHR
YQQPGEEEVVGHGDEILLDDDDGDDDDEVPPRGYSWGQLSRMPLEEAGRK
LGTFSAKGFSTSGGGGGGVGGGDGRGCLDVSDCEEGGGGCAAGGFEDDLA
DNSDSDLELSEGLMFDLEM*

mRNA from alignment at Ecto-sp13_S_contig771:7974..16026+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig771.18948.1 ID=mRNA_Ecto-sp13_S_contig771.18948.1|Name=mRNA_Ecto-sp13_S_contig771.18948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig771:7974..16026+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGAAGGGCAATGCCACAATTTGGCCGCCGGCTCTCGGCATCATCTACTC
CGGCGGAGAGACGAAGTGCAATCGCTGCAACCCGTCGCTCGTCGGCCTTT
TGCCAACAACGCCGTCCAGCCGAATACCGAGACAGCGCCCAAGATCCTCC
CGGTGCTGCTGCTGCTGCCCCCGCCGAGGAGGACTTCAAGCGCCCCCGTG
CCGTATCGCCGTCTGCTCTTCCCCCCAGCGGGCCTGAAGTCGACGACCTT
GTTGCTGCTGCTGCTGCTGCTGCTGCCTCCAAGGAGCTTGCGGCGGCGAC
CGTTCTTGCTGGTCCTGGGGGCTATCTCTGCTCCTCCCCCCGCTTGACGA
TGGAGAAGGCCGCTCCGGCAGCCCGCGAGGAGGACCGGCAGGGCGTTGGT
TCCAGGGGCTATGTCCGCGCTCGAGCGCTGTGCTTTCAGCCGGAGGAGCG
GAAGGAGCGGGACGTGGAGGATCAGATAACCTGTGTAAGTTGTGACTCTT
TCTTTTTTGATCTGCTGGTTTTCTGGTTGACCCCTCATGTCGTGTGGTGG
CCCCTTGGTCCTTCTGCCTTCTGCGCCATGGCGTTTGCGTTGGGGTAGTT
TGCGCGACAGCATCGTGCCGGTTATTATGCGTTTTCTCTTGCCCGAAGCC
GCCTCTCTCTCTGTGTGTAGAGGGCCTTCGTTGCTGGCGGCTGTGCCTGT
ACGTTGGCACCAGGAGGTTGCCCGCCGGAAAACTGGGGGGCGGAGTATAT
TTTGACTGGAAATATGGGAATGAGACCGTGAAGATCTTTTTGCAAACACA
CATCACACATGGCACCAGGGGCCAGCGGATGGACGCGAGAAAATAAGAAA
TACCCCTTCCAGCTTACAGCAGTACCCACATCCCTCATGGCAATAAGCTT
TGCGCTCAGTCGGTGGACTTCTGTATACCCGTCTCTTCAAGCCAGGGTTC
CAGCACACCGTCCTCGTTGCCCTCTTCTGTAGCTACACGCCGTCCGATCT
TTCTGTGGGTCCGACGTCCGGTTACCGCGGTTGATTGATCATCTCGGCCG
TTCTTTTTTTTTCGCTTGCGTGTGTGTTTCAGCAGCAGCGGTATGAAAAC
AACAAGCGATTCTTTGGATGTAGCCTCACGACGGAGGGACAGCAGCAGCA
GCAGCAGCAGAGCAAAGGAGGAGCCGCCCCGCTGCTGCGAAACAACTCCA
GCGTGTCGTCCACCATATCGGAGCCCATGGATATCCCGGGGGCGAGAAGC
ACCAGCAGCAGCGTCGAGAGCGGCGGCGGTGCCGGCGCCGATGAGGTAAA
CAACAAGCAGAAAAGCGATTTGATATTAGTGACCCGCTGTAGTTACTTGC
TGCGCTGGCTTTCCTTCTTTTATTTATTCTTTGGACCACAATCTTTCCCA
CGACCAGGTGAAGCTCACAGAGGAAGACGGGCGCGCGTACCCGCTCTTTT
TTATGTTGTTCGCCTATGCACCGCGCGGGCGAGCGATAGTTGTTGATTGT
GAATACCATTTGCTGGCGATGCCGCTTTATATCTACCACCTGCTGCTGCT
GCTGCTGTAATCGGTTTTTTTTTCTTCCACAAGACTTGGGTGCCTTCATT
TCGGGATTGAACTTTGTCAGCACCGGAAAATAGCCACGTTATGTATTTTA
GCAGTCCACGTGTATTGCTACAGTACATTCACGAGCATATATTGTCCCCC
CACACACACACGCGCGAAACGTCCCGCCGAACCCTCGTGAGCGTACAAAA
AAATAAAAGACAACGTTTGTTGTTCTCGATCACGGTATGCATGTACACCA
GTTATCAATCAATGGAATTGTATGTGGGCACATGTAGGTGGAGGTCCCCT
TAGCTATTGTTGGTTGACGGCTAACAACGCGGCCGACCCGGTTCTTTTTC
TCATTGTTTTCTCCCCCGTGACCAGGGAAGGAGTCATCGCAAGAATATTC
TCGACCAAATCAGAAAAGTCACCGGAATGGTTTTTTACTCAGATAAGCAA
CCTACAAGCTGGGTCTTTGGATCCAGACTCATCCGCTGCAAATATTGTTA
ACAATGTTGTCATACTGCACTTCGCGACGTGCAAAAACACCACTTTCATT
TTGTTGTTGTTGTCGAGTCATGATGATTTGGCTACAACAAGCTGTCGAGT
TCTTGGCGTGATGTAATAAGATGGGGGCCCCCCATGTGCTCGGTACACAC
ACCATATGCGCATGCATATCTTAGTTGATCGGATCACATCCGGGTCACGA
AACGATACTCAACTCGGACGGACACTTGTTACGTACCATGTAATTCCCCG
CGTTTTTCCGTCGCCCCCTCTCTCTCCGGGGGCTGACTGCGTTTGGTGGG
TCCGTACTCCGCAAACCAAGAAATGATACAAGGCAAACTAAGCATGCTTC
GTTAACTGCAATAGGGAGACAAGCTTTACCAAATTGCAAGGATTGCTTCG
CTGCCAAGTATTAGTATTTGCGCGTGCGTGCCTCAACAACCAGAAGTTAC
CCTGGCAACACACGATACTTCGTAGTACAAAACAAGCACACTTGTGGACC
ACGTGGGGCGCTCGTGGGAACGAACAACGAAAAACCGTAACCGTTGTTGT
CTGTTTGTTGTTGTTGTTAGTTGGTCCGGTTGTACTGACAATATCTGCAA
GCAGCCAACCCTGGGATCCATGCCAAGCAGCACCTGATAGGCTGGCTGCC
CTTACATCCGGCAACGGATTACGACTTCATGTGGCGCATGTTTTGCCAGA
AACAGGTGCTGATTGGCATGGATCCCAGGGTTGGCTGCTTGCAGATATTG
TCAGTACAACCGGACCAACTAACAACAACAACAAACAGACAACAACGGTT
ACGGTTTTTCGTTGTTCGTTCCCACGAGCGCCCCACGTGGCTTGCTGCTG
TTGCAGCACACCATAATGCTAGATACACCTTTTTCCGCCTTTATTTTCGC
CTGATCGTTCTACCCTCCTCGTGTTACTGCCGTTTCTGTATACAAAAAGA
GAAACCCGCAAGAGAACCACGGAAACCTAGCGCCCCTCCCCCCCCCGCCC
CGGCGCGCGCAGCCACGTGATCAAGCACTGTTTGTCTGCCTTGTACGCGT
CCCCACGACCTCCTCCTAGCTTGAGCCGTGCCGTGTCCACGTGGAATCAC
TCGCACGGGGGATCTTTCACCCTCCTTTTGTAGGAGAGACACTGTACTTT
TTCCGAAGGATCCATGTTCGTTTGTCTCGAGGCCGCTGGCCGATCATCAC
ATACAACCACACCTACCCCACCCGCCTTACCCTACCCTTCGCACCGCTGT
CTCCTCCCCCTCGTCGCGTTTGGTCGGCCGCGCAATGCATCGAACAAAAA
AAAAACGAACGCAGGAGGGATGGGTCTCGCTGTGGAACACGTACACCAGG
CTATTCCCCGGGACCTTCACCGGATGCAGCCCCCCCGGGTCCGCGCCCCC
TCTCGACTCCCCCCTGTACGCAGCTTCCCCGCGGCCGCCGCCGCCGCCGC
CCCCACCGCCGCCGATGGACGCCTTCCCGAGTAGGAGGAACAAGGCTTCG
GGTTTGGCAGGAACACCGGACGTCCGCGGCGGCGGCCTGTTGCCGGCGGC
GAGGGCAAGCGGCCGGTATCCGTTGCCCCCGGTAACGCCCGAGAGCGGCA
GCGGCAGCCGTCTCCCGACAACGGCGACGGTGCGCCGCCGCCGCCGCCGC
CTCAACCAGCGCCGCCCTTCGACGGCAGCGGTGCCGACGAGCCCCGGCGG
CGGCGACGCGTCCCGGCTGGGAGGAAACGATGCCGCCACCGGCGGCGGCT
GCGCGAAAACGGACCCGGGTCCTTCCCGTCCCGCATCATCTATACCACGA
CCCGACGGCCGGTTCTCCTGCCACCGGTATCAGCAGCCGGGGGAGGAAGA
GGTGGTCGGACATGGCGACGAAATTCTGCTAGACGACGATGACGGCGACG
ACGACGACGAGGTACCACCTCGGGGCTACTCCTGGGGACAGCTCTCCCGG
ATGCCGCTGGAGGAGGCGGGGCGGAAGCTCGGCACGTTCTCGGCAAAGGG
CTTCTCTACCAGCGGCGGCGGCGGCGGCGGCGTTGGTGGCGGCGACGGAA
GAGGTTGCCTCGACGTTAGCGACTGCGAAGAGGGCGGCGGCGGCTGTGCT
GCTGGCGGCTTCGAAGACGACTTGGCCGATAATTCTGATTCGGACCTTGA
ACTGTCAGAAGGGCTCATGTTCGACCTTGAGATGTAGTGCTCGTAATTGG
CTTTTCCGGGCGAGGGTCTCGCACTCGTTAGTTACTGGCATCCGATCAGT
CACTTGGGTGAAAACGGGTGTGGGAGAGGGGTTGGAAGAAGTCCAAGGTC
ATGGGGGTGCAATAGCCGCGGGTTGGATTAGTCGCACGGCAACCCGAAAC
GGGTGTGCGGGCGCCAACGCCTTGAGGAGCGTTTAGAGGTTTGAATCGCT
GCGTTCGGCGCTGTTACCTTCACCTTTTCCGATTAGCACCAGTTTCGGGT
GCCCCGTCTGCGTGACGCGACATGCGGTTGGCACATTTTCTTTTTTAATT
TTGCCGCGGGCTTTTCGTTTTCTGTTTTTTTTTTTTTTAGCGGGCCATCC
TCCGTGTTTCGTGACTTGTTTTACACCCCGGCAGGACCTGGGGTTGTCAT
TTTATCACGGCTGATGCTAGCCACGCGCTCTTCATCTTGTTTTTTTTTTT
TTCTTGACCGTCCGGTCAGGTAGTGTAGGTAGGTAGGCAGCGGGGGGCTC
CGAAGGGAGCGCCGCCGCTTGTCCACCCCCCCCCGTGTTCGCTCTGGGGG
AGAGGAGTTGGGTGTATACTTTGGGTTTCGATGTTGTGAGGGGGGGAGGA
GGGCAAGGGAGTCGCGACCGTTTCGGCGGATGGAGGGATGCCTCTGTGGT
GTTGGGTCGTTTCGTTTCGGGAGGTTTTTGATATCTTTTTCGTTTTTTTT
TCTTCTCCCCGCGCGAAAATGCCGATGCTGTTGCTGGCTGGTTATCGTAA
ACTCTCACGAATAGACTATAAATAAGATAAGCTGGTTGTACCCGGTGTTG
AGGAGGGCAGCGCTGTGATGTGTGTGTAAGTGTGTGTGTGAGGTGAGTGT
GTGCTCGACCGCTCCTCCTCGGTAGACTTGTTGTTTTATGGTTGTGGATG
CATTCTGCACGTTACGTCTGTCTGCCGCTGCTGCTGAAGCCCATGCTTCG
GCAGGCGGCGGCGGGTCCACCCAAGAGACGCGAGGGTAAGGAAACAGTCA
ACCCCCACACCACAGCGCTTGTAGGGGGCGAGGGTCATTCGTTCGTTTAA
GGACGGTTTGTATTGGAAAGGAAACTATTTTGCGGTCATCATTTGTTTTC
CCACGGGTGTTTCGACAGCAAGCAGCCGTGTTCGTGTGGGTGTTGGTGTT
CGTTGTGTGTTGGTTTCGTTGCAGGACACGGGTTAGTTGCAAAGAGGACA
GCGCGGGTTGTGGATGGTGGGTGAACAAGATGTCAAGGAGACGCAACGTT
GTCCAAGTCTGGAGCAATTCTCCCCGTGGCTCTTGTCTGGGGTTCGAGCG
AAAGACTGAGGTGTAGAGTCCGTTCAATTGTTCGTTTTTGTTTTCGTTGC
TGTTGTTGTTGTGTTGCTGCTGCTGTTACTGTTGCTATCGCTAACTGTTG
TTTGTACACGACGTCCATGATCCACACTGTTTTTGCTATTTGGTAGCTGC
CTTTTTAGACGCCGGGCGTTGTTCCATCTTATGTCTTCTGTCTGTCGTTT
TTGCTTCGTTTTTCCAGTTTTTTTTTTGTTTTTTGTCGCCACCTCGTGTT
TCGACGTCATTGTTGCCGCCACTCCGTGGTCATCTTCCACATGTTTCCCG
AACGCTTGATGAACTGGTTGGTTGGTTCAGTGTGTGCTTGGCAGGTCGCG
CTCTCGGTTGTAGAGTTCTCACACGCCACTGGTTGGGGGGGGGGAACACG
GCAGATCGGTCACCGAAAATACTACATCTCGTTTTTCCGTACGCGTCAGC
CACCTCTCAAGAATCTCTTGTTTTTTCCCGAGGTAGACTCGTTTCTTATT
GCTGGAACCGTAATTTGTGTGGCTGGTATTCCAACATCGCCTCAATTGAT
TTTCTTGCGTAAATTTAGGAGTCCCTATCTGAGCGCCTGTTCTTACGGTC
AAGTTCGTAATGTTTTTCCTTTTTGTGGAACCTGAATCCCTTATCCCCCA
GGTTCTCCAAGTGATTGGCGACCGCCGTTTGCTCTTCTTTTTGCGCTCGA
GGCGCGTATGCAAGCGCGTACCGTGTATTGGGGGATGGGTTGGGCGTATT
TAGTTGCCAGCGAAAACGGTACTTGACGGTTCGGCTGCTGGGCGAGGAGA
TTTCGTTCTGCGGTAAGGTATTTCATGTATGCAGGTGGGACTCAAGGATG
GTTTCTTCGTTCCGTACCGGGGGATATTTGGTGCGAAGGGGTGTATGGGA
CGTACACACAGCAGCTGTAGGTCGGGATTGGTGGGGCTACGTGTGGTGGC
GGGCGTCGTCTTTCAGTGCTGGAAGCTTTTCTAGCGGTTGGTGCCCTGAG
CCCGCTGGCCGCTTATGGCGTGCTCGGTGGGCCGTGAGAGTGGCTACGGC
AGAGTCATCCCCGTTTGGTGCTGGTGGCGGTGCGGTTTGCGGTATGATGT
CGGAAAGACTCTGGTTTCACTTTTGTGGGGTACGAGTCAGCTGTTTGTCG
TGGCCTAACGGTGTGGCTCCTCCACGAAAAGACCCCCGTGCCCACGAAAT
CCCCCGCCATGCTCTTTCCTCTCTCCGATGCTGATTGGTATTGCACTAGT
CCAAGACTGTCTCCTGCTCGGAGTTTCTGGTAATGGTAGTCGTGGGTACC
AGTGACACGTTTTTCATGTCCGCTCCACAAAACAGCTGTGTTGCTGGATT
ATCGTTTCCCTCCAAAGGCTTCTACGTGCTGTGTGGATTTGGTGGTCGTC
CACGCGATGTATGTGCCTTGGTCGGGCTATTTCGGGGTGCACTCTTTTTT
GGCTGGTTATTTGTCCGGGGGGGTTTCTGTGGTAATAGGGGACCATGGAA
GAATGAATGCGGTGGTGATGGTAGAGAGCGAGCGGGGTACGCACACACCC
GTTGACGGCCCTATCGTCACAGACACGTACGTAGTTTTGGACGGGTGCTG
CTGTGTTTCGGTCACTCCGTTGTGTACCTCATGTCGCTCATGCTAAGCTT
GGGTTTGACCCACACTAGTGCACCCTTGCTTGTGAGTGTCGTTGTACTTT
GGTATAATGCTAAATTTTGGAATGAAGGGAGGGAATTAACAAAGAAAAAA
TAGTGAAGAACTAACGCGGGCGTAAGAGAAAGGTTGTTGATGTGCCAATC
CTCCTATGATGTCACTAGCTCCGCGTACGAGATAAAAACAAGAAAAAACA
CTGGCTTGTAAAAGTGGATACTTCGAAGTACTATAGTTGTGTTTTGTTTT
GCCTGTTGTTGCCATCAACCTCATCGCTCGCTGTGGTTGGCTTGTTTTCC
GGAGTTACGTTGATTGAGGGTTCGGTTAGTTATGAAACCGTGGTAATTCG
CGGCAAGGGGGGGTCGGAAAAGAGGAATGAATGATAATTCGTGGAAATTA
AGTGTTTTTGCCTACTTGTGGTTGCAAAAAATTACCGAGTTCTAGGGGTG
GGGGGGCAGGCAGTGGAGCTGTGGAACGGGGGATAGTGAAGCGACGTTTA
GATTTAGGTCGTATCGACGAGGCATGGCTCTGCCGTCGGTGTATTGCTGG
CGGTGCCATTTAAGAATGCGCCGCCACGTTGGGTGTGTGTATGTTTTTTG
TGCTTGAGGTGGACGACAAGAAGTATATATAATAGACACTTTATTTTTCA
ACTTCTCTTTTTCTTTTCTCACTAATACTATACTGCTGTGCACACCTAGA
CTGCCGTGGGCCGTGGCTTCTTCTTCCCCAATTGAGACATTTGTTTTAAT
TTTGAAATGGTTTCATCGTCTTAATTTCATTCCAAAAGCCGGAACAAGGA
ACTCAAGCAGCATCGGAAGAGAAAGAGAATGAACGTCGTAGGCACATACG
TCC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig771:7974..16026+

>mRNA_Ecto-sp13_S_contig771.18948.1 ID=mRNA_Ecto-sp13_S_contig771.18948.1|Name=mRNA_Ecto-sp13_S_contig771.18948.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1560bp|location=Sequence derived from alignment at Ecto-sp13_S_contig771:7974..16026+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCACAATTTGGCCGCCGGCTCTCGGCATCATCTACTCCGGCGGAGAG
ACGAAGTGCAATCGCTGCAACCCGTCGCTCGTCGGCCTTTTGCCAACAAC
GCCGTCCAGCCGAATACCGAGACAGCGCCCAAGATCCTCCCGGTGCTGCT
GCTGCTGCCCCCGCCGAGGAGGACTTCAAGCGCCCCCGTGCCGTATCGCC
GTCTGCTCTTCCCCCCAGCGGGCCTGAAGTCGACGACCTTGTTGCTGCTG
CTGCTGCTGCTGCTGCCTCCAAGGAGCTTGCGGCGGCGACCGTTCTTGCT
GGTCCTGGGGGCTATCTCTGCTCCTCCCCCCGCTTGACGATGGAGAAGGC
CGCTCCGGCAGCCCGCGAGGAGGACCGGCAGGGCGTTGGTTCCAGGGGCT
ATGTCCGCGCTCGAGCGCTGTGCTTTCAGCCGGAGGAGCGGAAGGAGCGG
GACGTGGAGGATCAGATAACCTGTCAGCAGCGGTATGAAAACAACAAGCG
ATTCTTTGGATGTAGCCTCACGACGGAGGGACAGCAGCAGCAGCAGCAGC
AGAGCAAAGGAGGAGCCGCCCCGCTGCTGCGAAACAACTCCAGCGTGTCG
TCCACCATATCGGAGCCCATGGATATCCCGGGGGCGAGAAGCACCAGCAG
CAGCGTCGAGAGCGGCGGCGGTGCCGGCGCCGATGAGGAGGGATGGGTCT
CGCTGTGGAACACGTACACCAGGCTATTCCCCGGGACCTTCACCGGATGC
AGCCCCCCCGGGTCCGCGCCCCCTCTCGACTCCCCCCTGTACGCAGCTTC
CCCGCGGCCGCCGCCGCCGCCGCCCCCACCGCCGCCGATGGACGCCTTCC
CGAGTAGGAGGAACAAGGCTTCGGGTTTGGCAGGAACACCGGACGTCCGC
GGCGGCGGCCTGTTGCCGGCGGCGAGGGCAAGCGGCCGGTATCCGTTGCC
CCCGGTAACGCCCGAGAGCGGCAGCGGCAGCCGTCTCCCGACAACGGCGA
CGGTGCGCCGCCGCCGCCGCCGCCTCAACCAGCGCCGCCCTTCGACGGCA
GCGGTGCCGACGAGCCCCGGCGGCGGCGACGCGTCCCGGCTGGGAGGAAA
CGATGCCGCCACCGGCGGCGGCTGCGCGAAAACGGACCCGGGTCCTTCCC
GTCCCGCATCATCTATACCACGACCCGACGGCCGGTTCTCCTGCCACCGG
TATCAGCAGCCGGGGGAGGAAGAGGTGGTCGGACATGGCGACGAAATTCT
GCTAGACGACGATGACGGCGACGACGACGACGAGGTACCACCTCGGGGCT
ACTCCTGGGGACAGCTCTCCCGGATGCCGCTGGAGGAGGCGGGGCGGAAG
CTCGGCACGTTCTCGGCAAAGGGCTTCTCTACCAGCGGCGGCGGCGGCGG
CGGCGTTGGTGGCGGCGACGGAAGAGGTTGCCTCGACGTTAGCGACTGCG
AAGAGGGCGGCGGCGGCTGTGCTGCTGGCGGCTTCGAAGACGACTTGGCC
GATAATTCTGATTCGGACCTTGAACTGTCAGAAGGGCTCATGTTCGACCT
TGAGATGTAG