prot_Ecto-sp13_S_contig7703.18944.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7703.18944.1
Unique Nameprot_Ecto-sp13_S_contig7703.18944.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length260
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7703.18944.1 vs. uniprot
Match: A0A6H5JI81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI81_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 3.880e-114
Identity = 210/261 (80.46%), Postives = 217/261 (83.14%), Query Frame = 0 
Query:    1 MLDSRDPAGLVNARASVCILPSRDTQDLKDARPS-ARTPGRGATDVKTGGVCRGGVCGSGNGVDRHRRLPCGSASSSTFLLVICMLLPHAANGFVPGPSPSLRRQPRGHDGLRSGGRAGLPSATLGASSSSTARRAAFSAHPAGSACRATFSYCQISSRHSCQSSLSMSWCSSGGYQQRRXXRLSRLAPASAAAEGAPESTGISGSTAAASGGRNRLSAVRLATGRVLRGVVAAALRAATPARCRRAAGGVLVSAAAFCVL 260
            MLDSR+ AGLV+ARASVCILPSR+TQ  KDARP   R PGRGATDV TG +CRGGVCGSGNGVDRH RLPCGSASSSTFLLVI MLLPHA NGFVP PSPSLRRQPRGHDGLRSGGRAGLPSATLGASSS  ARR  FSA PAGS  RATFS C  SSRHS QSS+ MS C+SG      XX           AEGAPESTGISGSTAAA+GGRNRLSAVRLATGRV RGVVAAALRAATPARCRRAAGGVLVSAAAFCVL
Sbjct:    1 MLDSREAAGLVDARASVCILPSRNTQGPKDARPRRVRAPGRGATDVSTGSICRGGVCGSGNGVDRHCRLPCGSASSSTFLLVIYMLLPHAVNGFVPVPSPSLRRQPRGHDGLRSGGRAGLPSATLGASSS--ARRVPFSAPPAGSDGRATFSDCHTSSRHSYQSSIPMSSCTSGXXXXXXXXXXXXXXXXXXXAEGAPESTGISGSTAAAAGGRNRLSAVRLATGRVFRGVVAAALRAATPARCRRAAGGVLVSAAAFCVL 259
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BLAST of mRNA_Ecto-sp13_S_contig7703.18944.1 vs. uniprot
Match: D7FIB4_ECTSI (Hemolysin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB4_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 7.110e-32
Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = 0 
Query:  167 MSWCSSGGYQQRRXXRLSRLAPASAAAEGAPESTGISGSTAAASGGRNRLSAVRLATGRVLRGVVAAALRAATPARCRRAAGGVLVSAAAFCVL 260
            MS C+SG      XX LSRLAPASAAAEGAPESTGISGSTAAASGGRN+LSAVRLATGRV+RGVVAAALRAATPARCRRA GGVLVSAAAFCVL
Sbjct:    1 MSSCASGXXXXXXXXXLSRLAPASAAAEGAPESTGISGSTAAASGGRNQLSAVRLATGRVVRGVVAAALRAATPARCRRAVGGVLVSAAAFCVL 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7703.18944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI81_9PHAE3.880e-11480.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIB4_ECTSI7.110e-3287.23Hemolysin-related protein n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7703contigEcto-sp13_S_contig7703:2000..2779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7703.18944.1mRNA_Ecto-sp13_S_contig7703.18944.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7703 2000..4423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7703.18944.1 ID=prot_Ecto-sp13_S_contig7703.18944.1|Name=mRNA_Ecto-sp13_S_contig7703.18944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=260bp
MLDSRDPAGLVNARASVCILPSRDTQDLKDARPSARTPGRGATDVKTGGV
CRGGVCGSGNGVDRHRRLPCGSASSSTFLLVICMLLPHAANGFVPGPSPS
LRRQPRGHDGLRSGGRAGLPSATLGASSSSTARRAAFSAHPAGSACRATF
SYCQISSRHSCQSSLSMSWCSSGGYQQRRRRRLSRLAPASAAAEGAPEST
GISGSTAAASGGRNRLSAVRLATGRVLRGVVAAALRAATPARCRRAAGGV
LVSAAAFCVL
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