mRNA_Ecto-sp13_S_contig7702.18943.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7702.18943.1
Unique NamemRNA_Ecto-sp13_S_contig7702.18943.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 1.250e-132
Identity = 302/543 (55.62%), Postives = 307/543 (56.54%), Query Frame = 1 
Query:    1 MWMDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAXXXXXXXXAGIGRAPSFASGPVLGFNPSSALSQARNLPLTLIGSSTPPSVGTPSXXXXXXXXXXXITHNFGDLGGLGNGGSAVAGMNGHPASAAATQMAIDNLHRPXXXXXXXXXXXXXXXXXXXXXGMMGAHEEYLAQQEALARRHQIQSPILTVDWQQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNSVEELLAKAGQMHLLPNFLEQEFDVNAIVLMEEQDFDEIKARSFIPFGPQKKIQKAIREATANMERAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGADAAAASDDEPRAADLCAICMENPIEVTFVGCGHFICCVTCGNR 1629
            MWMDQNFPDGVMRKLHIHGNKQQVEAA+ EVEFLMKSAPVNTPRPGKMGP QLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTA+EVDLAATLVDEVIASGTASD+TAXXXXXXXX GIGRA SFASGPVLGFNPSSALSQ                                                                                                                                                                                                                          ELLAKAGQMHLLPNFLEQEFDVNAIVLMEEQDFDEIK    IPFGPQKKIQKAIREATANMERAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ++DEPRAADLCAICMENPIEVTFVGCGHFICCVTCGNR
Sbjct:  230 MWMDQNFPDGVMRKLHIHGNKQQVEAAIDEVEFLMKSAPVNTPRPGKMGPKQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTADEVDLAATLVDEVIASGTASDSTAXXXXXXXX-GIGRALSFASGPVLGFNPSSALSQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELLAKAGQMHLLPNFLEQEFDVNAIVLMEEQDFDEIK----IPFGPQKKIQKAIREATANMERAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------TEDEPRAADLCAICMENPIEVTFVGCGHFICCVTCGNR 540
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 8.990e-87
Identity = 150/159 (94.34%), Postives = 153/159 (96.23%), Query Frame = 1 
Query:    1 MWMDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAXXXXXXXXAGIGR 477
            MWMDQNFPDGVMRKLHIHGNKQQVEAA+AEVEFLMKSAPVNTPRP +MGP QLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTA XXXX   AG+GR
Sbjct:  664 MWMDQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPARMGPKQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAAXXXXA--AGVGR 820
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A7S2G2V8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2V8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.300e-10
Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 1 
Query:    7 MDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASG 417
            +DQN+P+G+ RK+ + G+  QV  AVA V   +                   HG       P    + +TI CP  LVG +IG+ G  I  ++  S A +++ Q  P+G P  V I GT + V++A  LV++VI  G
Sbjct:   60 IDQNYPEGMPRKITVSGSILQVSQAVAMVNQKIND-----------------HG-------PSTGGTTQTIDCPKNLVGRVIGRGGETINDLQQRSGARIQILQDVPEGTPCKVTINGTPQTVEVALELVNDVIQHG 172
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A7S0KCC2_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KCC2_MICPS)

HSP 1 Score: 68.9 bits (167), Expect = 8.400e-9
Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 1 
Query:    7 MDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTA 438
            +DQNFP+GV RK+ I G    V+ A   VE L+K  PV   R G +GP Q  H                 ++CP  +VG +I + G  IK ++S + A +++ Q      P  V ITG    V+ AA  V +VI  G+ +  +A
Sbjct:  102 VDQNFPEGVPRKISISGPAGCVDIATKLVEDLLKGGPV---RSGSVGPGQAQH----------------LVECPKEMVGRVISRGGETIKGLQSQTGARIQIDQ---TTSPCTVTITGNPYCVEAAARAVTDVINGGSTAPYSA 223
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A7S3UBS0_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBS0_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 1.090e-7
Identity = 40/138 (28.99%), Postives = 69/138 (50.00%), Query Frame = 1 
Query:    7 MDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGT 420
            +DQ++P+G+ RK+ + G K++VE  V  V  L++  P  T +     P    H                 ++CP A +G +IG+ G  IK +++ S A +++ Q      P  + I+G  + V LAA +V ++I  GT
Sbjct:  106 IDQDYPEGMPRKITVKGKKEKVERGVKLVHDLIRGGPGATAQVLAAVPGGTTH----------------VVECPKATIGRVIGRGGETIKRLQATSGARIQINQ---TEEPMKITISGHQDCVQLAAAMVADIIGGGT 224
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A3M7KQ00_AUXPR (WW domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KQ00_AUXPR)

HSP 1 Score: 64.3 bits (155), Expect = 2.970e-7
Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 1 
Query:  208 KKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAXXXXXXXXAGIGRAPSF 489
            ++T++CP  +VG +IG+ G  I+ ++S S A++ + Q +P+G PR V I+GTA+    A  L+ E+I  G A    A         GIG++ SF
Sbjct:  238 QETMECPAGIVGRIIGRGGETIRALQSASQAHITVDQNFPEGQPRKVIISGTADAARRAVALIQELIV-GEAGSAQAIIQRVCAENGIGKSHSF 330
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A7S0S6K2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S6K2_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 3.460e-7
Identity = 42/126 (33.33%), Postives = 62/126 (49.21%), Query Frame = 1 
Query:    7 MDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLA 384
            +DQNFPDG+ RK+ I G    VE A   VE L+K  PV +                + PG      +++ ++CP  +VG +IG+ G  IK ++S + A +++ Q      P  V ITG    VD A
Sbjct:   23 IDQNFPDGIPRKISISGPVGCVEIASKLVEDLLKGGPVGSTS--------------VVPGQ-----AQQLVECPKEMVGRVIGRGGETIKGLQSQTGARIQIDQA---ASPCTVTITGDPYCVDAA 126
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A061RZW2_9CHLO (Far upstream element-binding protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZW2_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 3.740e-7
Identity = 44/144 (30.56%), Postives = 69/144 (47.92%), Query Frame = 1 
Query:    7 MDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGPNQL------PHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGT 420
            +DQNFP+GV R++HI G    V+  +  V  L+   P +         N +       HGGG+           +T++CP  +VG +IGK G  IK +++ S A +++ Q      P  V ITG  + V  A   V ++I  G+
Sbjct:  276 IDQNFPEGVDRQVHIQGRPDAVDRGLKMVTELIAGGPGSA--------NDVIQKVIQKHGGGI----------SQTLQCPKTMVGRVIGKGGETIKALQNASGARIQIDQST---EPMTVTITGAPDAVARAEASVTDIINGGS 398
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A250X1Z5_9CHLO (WW domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X1Z5_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 6.150e-7
Identity = 30/76 (39.47%), Postives = 51/76 (67.11%), Query Frame = 1 
Query:  211 KTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIAS-GTASDNT 435
            + + CP  +VG +IG+ G  I+ +++ S A++ + Q +P+GHPR+V I+GT + V+ A  +V+E+I S G AS  T
Sbjct:  212 RKVSCPAHIVGRIIGRGGETIRSLQTASTAHIVINQDFPEGHPREVLISGTPDAVNRAHEMVNELINSEGAASTQT 287
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BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Match: A0A7S2QUF9_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas chlamydogama TaxID=225041 RepID=A0A7S2QUF9_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 3.170e-6
Identity = 25/68 (36.76%), Postives = 47/68 (69.12%), Query Frame = 1 
Query:  211 KTIKCPHALVGYLIGKKGAMIKHIKSMSNANVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIAS 414
            +++ CP  +VG +IG+ G  I+ +++ S A++ + Q +P+GHPR V I+G  + V+ A  +V+E+I+S
Sbjct:  200 RSVSCPAGIVGRIIGRGGETIRSLQTASGAHIMVNQNFPEGHPRQVDISGKPDAVERAFNMVNELISS 267
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7702.18943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LI19_ECTSI1.250e-13255.62Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
A0A6H5KMM6_9PHAE8.990e-8794.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2G2V8_9STRA2.300e-1032.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0KCC2_MICPS8.400e-934.03Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A7S3UBS0_9CHLO1.090e-728.99Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A3M7KQ00_AUXPR2.970e-736.17WW domain-containing protein n=2 Tax=Auxenochlorel... [more]
A0A7S0S6K2_9CHLO3.460e-733.33Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A061RZW2_9CHLO3.740e-730.56Far upstream element-binding protein n=2 Tax=Tetra... [more]
A0A250X1Z5_9CHLO6.150e-739.47WW domain-containing protein n=1 Tax=Chlamydomonas... [more]
A0A7S2QUF9_9CHLO3.170e-636.76Hypothetical protein n=2 Tax=Chlamydomonas chlamyd... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7702contigEcto-sp13_S_contig7702:1469..7208 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score412.9
Seed ortholog evalue2.4e-112
Seed eggNOG ortholog2880.D8LI19
Model size1704
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.K homology RNA-binding domain
EggNOG OGs2E9NA@1,2SFZF@2759
Ec32 ortholog descriptionSterile alpha motif/pointed domain
Ec32 orthologEc-04_002890.2
Cds size1704
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7702.18943.1prot_Ecto-sp13_S_contig7702.18943.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7702 1469..7208 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464041.594933-CDS-Ecto-sp13_S_contig7702:1468..15971681464041.594933-CDS-Ecto-sp13_S_contig7702:1468..1597Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 1469..1597 -
1681464041.6054912-CDS-Ecto-sp13_S_contig7702:2301..25621681464041.6054912-CDS-Ecto-sp13_S_contig7702:2301..2562Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 2302..2562 -
1681464041.615378-CDS-Ecto-sp13_S_contig7702:3071..38211681464041.615378-CDS-Ecto-sp13_S_contig7702:3071..3821Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 3072..3821 -
1681464041.6260178-CDS-Ecto-sp13_S_contig7702:4426..45881681464041.6260178-CDS-Ecto-sp13_S_contig7702:4426..4588Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 4427..4588 -
1681464041.6370096-CDS-Ecto-sp13_S_contig7702:4995..51121681464041.6370096-CDS-Ecto-sp13_S_contig7702:4995..5112Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 4996..5112 -
1681464041.6473904-CDS-Ecto-sp13_S_contig7702:5423..55551681464041.6473904-CDS-Ecto-sp13_S_contig7702:5423..5555Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 5424..5555 -
1681464041.6579883-CDS-Ecto-sp13_S_contig7702:7055..72081681464041.6579883-CDS-Ecto-sp13_S_contig7702:7055..7208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7702 7056..7208 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7702.18943.1

>prot_Ecto-sp13_S_contig7702.18943.1 ID=prot_Ecto-sp13_S_contig7702.18943.1|Name=mRNA_Ecto-sp13_S_contig7702.18943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=568bp
MWMDQNFPDGVMRKLHIHGNKQQVEAAVAEVEFLMKSAPVNTPRPGKMGP
NQLPHGGGLPPGHPDLNYSKKTIKCPHALVGYLIGKKGAMIKHIKSMSNA
NVELFQGYPDGHPRDVFITGTAEEVDLAATLVDEVIASGTASDNTAAAAA
AAAAAGIGRAPSFASGPVLGFNPSSALSQARNLPLTLIGSSTPPSVGTPS
VASVGTPSVSSITHNFGDLGGLGNGGSAVAGMNGHPASAAATQMAIDNLH
RPPPPPGMGGPAAGAGAPPHHPPGMMGAHEEYLAQQEALARRHQIQSPIL
TVDWQQQHQQQHQQQHQQQQHQQQQQQQQHQHQQQQQHQQQQQHQHQHQQ
QQPPPPPPPRKAAAPAAAAAPTAAPPAAAAAANTAPPPPPPPFNSVEELL
AKAGQMHLLPNFLEQEFDVNAIVLMEEQDFDEIKARSFIPFGPQKKIQKA
IREATANMERAAAAASGATAAPAATGSDSGVGSGGGSGGGSGGGDGGVGA
DAAAASDDEPRAADLCAICMENPIEVTFVGCGHFICCVTCGNRQVGSPCP
LPECRIMVERAVQPYTG*
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mRNA from alignment at Ecto-sp13_S_contig7702:1469..7208-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7702.18943.1 ID=mRNA_Ecto-sp13_S_contig7702.18943.1|Name=mRNA_Ecto-sp13_S_contig7702.18943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5740bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7702:1469..7208- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGATGGATCAGAACTTCCCCGACGGGGTGATGCGCAAGCTTCACAT
TCACGGCAACAAGCAGCAGGTGGAAGCCGCCGTTGCCGAGGTGGAGTTCC
TCATGAAGTCTGCCCCGGTCAATACTCCCAGGCCAGGAAAGATGGGCCCA
AATGTGAGAAAGAGAAAATATCCGAATACTTTTCTTTTTTTTGTCTGTCA
TGACTTCACAGGTGAGAAAGAGAAAATACCTACATACTTCTCCATGTTTT
TTTTTCTTGTCTGTCATCACTTCAAAAAAGCCCTTGTTCAGCTTTCGTGT
TGCGTATGAGTAGTGGTGGAGTGGATTATTGCTCTGTATTTTTAGAAAAA
GAAGAAGAGAAAATCGATCAATCGTCGTACTTTTTGTGCGGACGATCTTA
ACGCCTTCACGGACGGTAGAGGTTAGTGCTGGCTGGCACAGTGAGCGTTT
GACACCTCCGCGCCTTGGCTGGGACTTTCGTCGACGAGGGACGCTTTGGC
TCGTTATACTAGATGGTTGTTTGTTGTTTTCGCTCCGTAAGTAATGACGG
TCGTAAGGATCATATTCTACACAAACGACGTGGTACAGCAGCTTCCCTGT
AGTAACGGAGCAAGATGTGGTGCACTGCTCGTACGTCGCCCAGAGTTCGG
CTAAATAATGCCTCCGGATAGGTTCATGAAAGCACATAGTGTGGTGACAT
CAAGGGGGGGTACGCAAGATGCACAATGAAGAAACAACGGCAGCCGAGGT
AGGATGACCAGCCAACAGCTCAGACAGAGCACCTAATGCAGTGTCATCAA
GGGGGTGAAGCACGAGGAAAATTAAGAGCAGGCGAGGTACCAGCATGACC
AGCCCACAGCTCAGACAGAGCACCCCGTGTAGTGTCATCAACGGGGTGAC
GCAAGATACAAGATGTATATAACAGCAGACGGGGTACTAGCAGAACCAGC
GGACAGCTCGGAGAGAGCACCCGGTGTAGTGTCATCAACGGGGTGACGCG
CGATACAAGATGTATATAACAGCAGACGGGGTACTAGCACGATTTGGCTA
GCCGAGCTGCGGACAGGTCCTTCTAGCTCGCCTGCTGTTGTTTTTTCATC
CTGCATCTTGCTTCACCCCCATGATGACAGCACGCTGGGTGCTATCATTA
GCCTACTCCGGAGGCATCACTTAGACGTAAAGGCGAAAGATCTACCCCAT
CAAAAGTGTTTGCCGGGATGTACTTGCTGCTGCATGTCTCTGGAGACGGC
ACCTCATGTATCTGTAACCTTGGTCCCTTCTCTTTGCTCTTTACATTCAT
TTGTTCGTGCAGGTCGTTATTGGTCTAAGGTCTGATATTCATGTTCCGTG
TGGGTGCTCTTTTCGTCCCTTTCTTGTTTGTGTCTCTCTGTCTCTTGTCT
CTTTCTACGCGTCTTGTCTGTATCTCTCTCTGTTTCTTTTCTCCCCCCCA
CCCCCCCTCTCGCTCTCGCTCTCTCTGTCCGTTCCCCGGCACTATGCTTC
GTTGCTTCTTTCTCTTCGTCTTCTTTACCTCCTGCTTGTTTCTGCCTGTC
TGCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTC
CCTCTCTTCTCGTTCTCTCTCCCCGTCTATCTCTATCTTCCGGGCTACCC
TAGCAACTCCCCCATGGAGGCGGCTTGCCCCCGGGACACCCGGATCTCAA
TTACTCCAAGAAAACCATTAAGTGTCCCCACGCTCTGGTTGGGTATCTCA
TCGGTAAAAAGGGCGCCATGATCAAGCACATCAAGGTGAGAAAGCAGGTC
ATAGTGGGTGGGGAGGGAAGGGGGCACAATGAAGCCGAGGGTACTTATCT
GTTGTTTGCTCAATTTTGGTTGGTTGCACCATTAGTACCTTATCCTTATC
CCCTTCGAGACGGACCGCACCTTTCACGTCTTGAGGTCTGAATTTTATCA
TGATGGTACCTTGTGCCGTGCTTGCACCCTTTTGCGTTGTTCGCGTCGCA
ATATCTCCCCTTTTGTTGTGTTTTCCGTAAGAGCGTCTTTTGTACCTGCT
GTCTCGCCCTTTTGATGCAACCGAAACTGTGGCGTTTGAACAATAGTCGA
TGAGCAACGCGAACGTGGAGCTGTTCCAGGGATACCCTGATGGACATCCC
CGCGACGTGTTTATCACGGGTACTGCCGAGGAGGTGGATTTAGCCGCGAC
TCTAGTTGACGAGGTGAGTTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAAGGGCAGACAGGCAGAATCAACCAGG
AGGCAAAAGAGACGAAGAGAAATAAGCGACAAAGTGTTGTGCCGGGGCAA
GGACGGAGAGAGCGAGAGGGGGGGGGGGGGAGAGAAGAAACAGCGAGAGA
GAGAGAGAGAAAGAGAGACAGAGACAGAGAGAGAAAGAGAGACAGAGACA
GAGACAGAGACAGAGACAGAGACAGAGACAGAGAGACAGAGAGAGAGAGA
GAGAGAGCCAACGATAATATTTTAACCGCCACCCATGGTACGATGCATCC
AGCTAGTGAACAAGGGCGTGCCTCTGATTCCGCCAATCGCTCTCGACGTC
ATGATCCTTCGCTTGAACAGGTGATCGCTTCGGGCACCGCCTCGGACAAT
ACTGCCGCTGCCGCCGCCGCTGCCGCCGCCGCCGGCATCGGCCGTGCGCC
TTCGTTTGCCAGCGGCCCCGTCCTTGGCTTCAACCCTTCGTCTGCCCTCT
CACAGGCGAGAAATTTACCCCTGACTTTAATTGTTGCCCTCCGTCGCACT
GCTGCTGTAGCGTAGTACAGAAAACGCGCCCAGAAAAAAACCAAAATTGG
CCACAAGAGCGGGTGTTCAATGAAAAAGCTGGCAGTACACTAGAATCTGC
ATAGTCGCCGTGGGGGGACCGTACTGCTGTCTGCTGTACCCCTCGAGACA
AGACGATAAACGAGCCTCGGGCAAAGTGAGAGGTGCGCAAGCAGATTGAA
GGGAAAATTTATAATTTTTTATTGATCTTGAGTGGTGTGAAGTCCTGTAT
CGCACCTACTTGTAGTAGCTCGATCCTTGTTTTTTTTTTTGAGAAAACAA
AAAACCTAGGTTCGTTTGTTTCTCTCCAAAGGTTGTGTTATCGGACGTAC
CCTGTCTTCCTACTCATTTCCGTCCCTCTTTTTTTTGAATTTTTTGTTGG
CGCAGTATTTTGTCTCGAGTTTTTCAGAATTCTCTGAAAACGTGAAAATA
TGCCGATTGCGAGAGAGTTTGAGCTTTTCACCAGAACTATATTAACAGTA
ATCCCTCGTTTGCGTACATTGTATGCATACATACCCGCAACAAATGATAA
CACGACGCGACCCGATGCGACAAAAAAAATAAAACAGGGCTCGTCCACCC
CGCCATCAGTGGGCACCCCTTCCGTCGCCTCCGTGGGGACCCCGTCCGTC
AGTTCCATCACGCACAACTTCGGCGACCTTGGCGGTCTTGGAAACGGAGG
ATCAGCGGTAGCCGGCATGAACGGTCACCCGGCCTCGGCGGCGGCCACGC
AGATGGCAATCGATAACCTCCACAGGCCGCCGCCGCCGCCTGGTATGGGG
GGGCCCGCGGCTGGGGCGGGGGCGCCGCCCCACCACCCGCCGGGCATGAT
GGGGGCACACGAAGAGTACTTGGCGCAGCAGGAGGCGCTGGCTCGGCGGC
ACCAGATTCAGTCGCCGATTCTAACCGTTGACTGGCAGCAGCAACACCAG
CAGCAACACCAGCAACAACACCAGCAGCAACAACACCAGCAGCAACAACA
GCAGCAACAACACCAGCACCAGCAGCAGCAGCAACATCAGCAGCAGCAAC
AACACCAGCACCAGCACCAGCAGCAGCAGCCGCCGCCGCCGCCGCCGCCC
CGAAAGGCTGCTGCTCCAGCCGCTGCCGCGGCCCCGACGGCGGCTCCTCC
TGCAGCAGCGGCGGCAGCCAACACTGCCCCCCCGCCCCCTCCCCCGCCAT
TCAACAGCGTGGAGGAGCTGCTCGCGAAGGCCGGTCAGATGCACCTCTTG
CCCAACTTCCTGGAGCAGGAGTTCGACGTGAACGCCATCGTGCTGATGGA
GGAACAGGACTTCGACGAGATCAAGGCAAGAAGTTTCGTCATGTGTGTTC
TTTTTTTGTTGTTAGCATCGACCGCGCTAACCCGGCGGATTAATGAAAAG
ACGTCAGTCTCGGTGCGGCTGAAAAGAGAAAGTGCTTCCCAAGGCCATGA
TCTGGGACCCCGTAAGGGTGTGTGTGTGCGTGTGTGAGCACTACGTGTCT
TGCGCTGTGCTAGCGTGCGTTGCCGCAGCGGAGAAGAGGAGATTGTGGTC
TGCGCGTGTGCATGCCATGCGTAATTTTTGACGTCACCACACCACAGACC
TACTGCTGTATGCTGCCTGGCCAAACGACTCACCGGCGAATCGCATGCCG
CTCCCAGCTGTGTGTGTACCTCTTGTTGTCCCTCAGTGGTTCCTCCCTTG
TCATGTTCAGGTATATTGTCATTGGCTGTGTTGCGCAAGTGCAAACGGTG
TAAAGTCGATCGCTCTCCCTCCCTTCACCCCGGTTTCTGTCTCTTGACCG
TCCTACTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAACACAGATTC
CTTTTGGTCCCCAGAAGAAGATCCAGAAAGCCATCAGAGAGGCCACGGCG
AACATGGAAAGAGCCGCCGCGGCTGCCAGCGGGGCAACCGCCGCCCCCGC
GGCTACCGGCAGCGATAGCGGCGTTGGCAGCGGCGGCGGCAGCGGCGGCG
GCAGCGGCGGCGGCGACGGCGGCGTGGGAGCCGACGCTGCTGCCGCGAGC
GACGACGAGCCGCGGGCGGCTGACCTGTGCGCCATCTGCATGGAGAACCC
GATCGAGGTGAGAGGATATCTTGTCGAGAAATATGCTGAAGTTGGCGTTT
TGCTGCAGAGGGGAGGGGGGAGATGCGCGCTGCTGTTGCTGGTTCTTTCC
CGCCCGGAACCCATTCCTCCTTGGTTCTCGCCCCACCCTCTCTTCAACTG
GACCGCACGATCATGGGCTCTTCTGTCCTCGAGTGCCGGGATTGATCGCG
TACGCTTTTCCTGGCCCACCATATCGATCGCTTGATGAAGAGGTTGACCT
TGTGTGCTGAGCTGGTGCTGAGGTATATTGCAGTGGCAACAACCATGACT
AGGGTAAGGGCACGTATATTTTCTTTTGTCAACGGGAAACGACCCCGTCA
AGTGTTGAGACTATGTAGTCCGGACAGAATAAGGTACTGGGCAGAGAGAA
CGGAACGGTTTTTAATGTGAAGACAACAACAACAACAACAACAACAACGG
TTGCGCGTGCCGCGCCAAGCTTGATGTCGTCGGCTATACGTATGTATCCA
CCACACAAGCCGGCGGACGGTTGTCAACCCTGCTGCAACGTGCGGCATGT
CGCCGTTTTCACTGACAGCTTGCCATGTTACTCTTTTTTGCGCTGCTCGC
CGACAACGAAACAACCGCTTTGGTTCCTCCCTACCCGACCTTTTGGCTTA
TTACTATTTTTTTTTCGCATACCCACCGACCGGGGGGGCGTCCTAACTGC
CCTCATCACAGGTGACCTTCGTGGGATGCGGACACTTCATATGCTGCGTG
ACGTGCGGCAACAGGCAGGTCGGATCGCCGTGCCCGCTCCCCGAGTGCCG
GATCATGGTAGAGCGCGCGGTGCAGCCCTATACCGGATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7702:1469..7208-

>mRNA_Ecto-sp13_S_contig7702.18943.1 ID=mRNA_Ecto-sp13_S_contig7702.18943.1|Name=mRNA_Ecto-sp13_S_contig7702.18943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1704bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7702:1469..7208- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGGATGGATCAGAACTTCCCCGACGGGGTGATGCGCAAGCTTCACAT
TCACGGCAACAAGCAGCAGGTGGAAGCCGCCGTTGCCGAGGTGGAGTTCC
TCATGAAGTCTGCCCCGGTCAATACTCCCAGGCCAGGAAAGATGGGCCCA
AATCAACTCCCCCATGGAGGCGGCTTGCCCCCGGGACACCCGGATCTCAA
TTACTCCAAGAAAACCATTAAGTGTCCCCACGCTCTGGTTGGGTATCTCA
TCGGTAAAAAGGGCGCCATGATCAAGCACATCAAGTCGATGAGCAACGCG
AACGTGGAGCTGTTCCAGGGATACCCTGATGGACATCCCCGCGACGTGTT
TATCACGGGTACTGCCGAGGAGGTGGATTTAGCCGCGACTCTAGTTGACG
AGGTGATCGCTTCGGGCACCGCCTCGGACAATACTGCCGCTGCCGCCGCC
GCTGCCGCCGCCGCCGGCATCGGCCGTGCGCCTTCGTTTGCCAGCGGCCC
CGTCCTTGGCTTCAACCCTTCGTCTGCCCTCTCACAGGCGAGAAATTTAC
CCCTGACTTTAATTGGCTCGTCCACCCCGCCATCAGTGGGCACCCCTTCC
GTCGCCTCCGTGGGGACCCCGTCCGTCAGTTCCATCACGCACAACTTCGG
CGACCTTGGCGGTCTTGGAAACGGAGGATCAGCGGTAGCCGGCATGAACG
GTCACCCGGCCTCGGCGGCGGCCACGCAGATGGCAATCGATAACCTCCAC
AGGCCGCCGCCGCCGCCTGGTATGGGGGGGCCCGCGGCTGGGGCGGGGGC
GCCGCCCCACCACCCGCCGGGCATGATGGGGGCACACGAAGAGTACTTGG
CGCAGCAGGAGGCGCTGGCTCGGCGGCACCAGATTCAGTCGCCGATTCTA
ACCGTTGACTGGCAGCAGCAACACCAGCAGCAACACCAGCAACAACACCA
GCAGCAACAACACCAGCAGCAACAACAGCAGCAACAACACCAGCACCAGC
AGCAGCAGCAACATCAGCAGCAGCAACAACACCAGCACCAGCACCAGCAG
CAGCAGCCGCCGCCGCCGCCGCCGCCCCGAAAGGCTGCTGCTCCAGCCGC
TGCCGCGGCCCCGACGGCGGCTCCTCCTGCAGCAGCGGCGGCAGCCAACA
CTGCCCCCCCGCCCCCTCCCCCGCCATTCAACAGCGTGGAGGAGCTGCTC
GCGAAGGCCGGTCAGATGCACCTCTTGCCCAACTTCCTGGAGCAGGAGTT
CGACGTGAACGCCATCGTGCTGATGGAGGAACAGGACTTCGACGAGATCA
AGGCAAGAAGTTTCATTCCTTTTGGTCCCCAGAAGAAGATCCAGAAAGCC
ATCAGAGAGGCCACGGCGAACATGGAAAGAGCCGCCGCGGCTGCCAGCGG
GGCAACCGCCGCCCCCGCGGCTACCGGCAGCGATAGCGGCGTTGGCAGCG
GCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGACGGCGGCGTGGGAGCC
GACGCTGCTGCCGCGAGCGACGACGAGCCGCGGGCGGCTGACCTGTGCGC
CATCTGCATGGAGAACCCGATCGAGGTGACCTTCGTGGGATGCGGACACT
TCATATGCTGCGTGACGTGCGGCAACAGGCAGGTCGGATCGCCGTGCCCG
CTCCCCGAGTGCCGGATCATGGTAGAGCGCGCGGTGCAGCCCTATACCGG
ATAG
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