mRNA_Ecto-sp13_S_contig770.18941.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: D8LIG7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG7_ECTSI) HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0 Identity = 734/869 (84.46%), Postives = 754/869 (86.77%), Query Frame = 1
Query: 1 MSGAAGDVDDFLEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYGQDSASFSFTQLLDWAEANDRKNQGGKGGVADHGGQTCAISTNDAAKMFDNADAWTAIARAHARNELKKEQEMKATAELEGRAGNSDEPGAESTAEWEDIKGQQQGSQDAATAATXXXXXXXXXXXXXXXXXXSEQYSPNTNQPEQXXXXXXXXXXXXXXXXXXXXXXXXXXAARLQALDLHLLPLSYHGCRTRAGAPSDACVPERERRKVAEDAAAASGRFLGGRQPQPSHPAWAGRRDPTIKRDGGADGGEVEGVHPSFWGYRTERRPGAADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGADVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGEDILSRNEAGLGRGRSLRRPQNREAASGDFDADAHAGKPFSGFLRGCGLPERVRAMITHALALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXX---ETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGGACVIHLTTTTTRAGEVNDSGQAG-VESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRASKELLAAAGVEEIWSLGFSWDIQDPPRPEDLPANMVVCERPGQELYLHDVVVQAERDFARLFPGEPFWPPPAGQGEDGDDQAEMLEAAASAVTTSGVDANKEGTGGGEQREEG 2595
M+GAAGDVDD+LEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYGQDSASFSFTQLLDWAEAN RK+ GGKGGVA GGQTCAISTN AAKM D+ADAWTAIARAHARNELKKE+EMKATA E XXXXXXXXXXXXXXXXXX NQ EQ XXXXXXXX AARLQ L+LHLLPLSYHGCRTRAGAPSDACVPERERRKVAEDAAAASGRFLGGRQPQPSHPAWAGRRDPT++ DGGA GGE EGVHPSFWGYRTERRPGAADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQA DVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGED+LSRNEAGLGRGRSLRRPQNREAASGDFDA+AHAGKPFSGFLRGCGLPERVRAMITHALALLPGGDEGGEGGG TTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPT+T QPTKTP PE LSAPHPXXXXXX ETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQ IGNPAAVHVVSLDDTTAACP+NLGGACVIHLTTTT RAGE +DS QAG V SQGA QDREGE+E EVPAGA+ANVDGP D+DG DGVLGRAS+ELLAAAGVEEIWSLGFSWDIQ PPRPEDLPANMVVCERPGQELYLHDVVVQAERDFARLFPGEPFWPPPAGQGEDGDDQA+MLEAAASAVTT+GVDA+ EG GGEQ EEG
Sbjct: 1 MNGAAGDVDDYLEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYGQDSASFSFTQLLDWAEANGRKHHGGKGGVAGDGGQTCAISTNQAAKMVDSADAWTAIARAHARNELKKEREMKATAGGEXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQTEQQRDGGEEKEPTAEEAAXXXXXXXXAAAARLQTLNLHLLPLSYHGCRTRAGAPSDACVPERERRKVAEDAAAASGRFLGGRQPQPSHPAWAGRRDPTMRGDGGAVGGEEEGVHPSFWGYRTERRPGAADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQA-----------------DVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGEDVLSRNEAGLGRGRSLRRPQNREAASGDFDAEAHAGKPFSGFLRGCGLPERVRAMITHALALLPGGDEGGEGGGATTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTNTHQPTKTPAPERLSAPHPXXXXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQGIGNPAAVHVVSLDDTTAACPDNLGGACVIHLTTTTARAGEADDSSQAGGVGSQGAPTNQDREGEQE-EVPAGANANVDGPGDEDGRDGVLGRASRELLAAAGVEEIWSLGFSWDIQGPPRPEDLPANMVVCERPGQELYLHDVVVQAERDFARLFPGEPFWPPPAGQGEDGDDQADMLEAAASAVTTTGVDADTEGGEGGEQEEEG 837
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: W7U8Q6_9STRA (Rab proteins geranylgeranyltransferase component a 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8Q6_9STRA) HSP 1 Score: 186 bits (471), Expect = 3.890e-45 Identity = 119/299 (39.80%), Postives = 167/299 (55.85%), Query Frame = 1
Query: 964 AADLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIA--------------APASSAAGA---------------------DVFGTKLLTPLEKRRLMKFLLFASDWGLQRR-GEDILSRNEAGLGRGRSLRRPQNREAASGDFDADAHAGKPFSGFLRGCGLPERVRAMITHALALLPGGDEGGEGGG------VTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVG 1734
A L+ SR FNLDL+ VL+A G + L++SGVASYLEF+ + AL++AS A A S++ G DVF + LL EKR+LMKFL +DWG + + G+ RNE LG+ RSL+RPQN+ S + + DA+ +P FL + E ++ ++ HALALL G EGG GG VTTEEGL ++ HL LG++G+TAF+ P+YG G+L+Q+F RM++V G +LR Q V +G C+GV+D G A C +V+G
Sbjct: 211 AESLIARSRDFNLDLSPVVLMAGGDMIAPLLSSGVASYLEFRPLYALFIASPSASAIRPSWKGTHQSEASESASTGENSSGPGVSRSVAFHPVPCSKPDVFSSHLLPAKEKRQLMKFLQAVADWGFRAQSGKSAQHRNEVELGQARSLQRPQNK--VSVELETDAYLQRPLRDFLEHSKMDEHLQWVVWHALALLLGPGEGGREGGDEGERQVTTEEGLRRIWGHLQGLGQYGKTAFLWPMYGGGDLTQAFSRMSSVWGGTYLLRDQPAQLAVHPETGNCLGVLDRKGAAIKCEHVVLG 507
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A7S2WGP3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGP3_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.830e-44 Identity = 171/572 (29.90%), Postives = 254/572 (44.41%), Query Frame = 1
Query: 985 SRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASD---------IAAPASSAAGA----------DVFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNRE-AASGDFDADA--HAGKPFSGFLRGCGLPERVRAMITHALALL------PGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSG---------------RCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGGACVIHLTTT--TTRAGEVNDSGQAGVESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRASKELLAAAGVEEIWSLGFSWDIQDPPRPEDLP------ANMVVCERPGQELYLHDVVVQAERDFARLFPGEPFW--------PPPAGQGEDGDDQAEMLEAA 2520
+R ++LDL+ + A+G VD +++SGV YLEF+ + +L + +AAPA +++ D+F +K LT EK +LMK L F DWG Q + +D+ ++++ L +GR+L RPQN +A G D +PFS FL LP R+R + +A+A++ P E +T +GL A++RHL ALG+FG+TA +APLYG E SQ+FCR+ AV G + +LR+Q R V++ + R VGV D G AC VV +F P + + +T + +SA H T G G + RV+ + P A + G+ AAV + +DDT+ CP G + V+HLT T A + ++ +AG+ G L R + LLA + E+W LGF+ PRP P + + + R L V+ QA F L PGEPF A +GE D+ MLEAA
Sbjct: 82 ARRWSLDLSPYAVFASGETVDLMISSGVGRYLEFRSVDSLCVLETSSSPPAPEALAAPAEASSPVTFWKVPCSKKDIFLSKALTREEKNKLMKLLRFCMDWGKQHFQHKDVATQDDVELTQGRALNRPQNSAGSAKGQVDPTPFLEQNRPFSEFLDAWALPRRLREAVLYAIAMISTPVPRPLTPESPTSPPTSTADGLAALHRHLFALGQFGDTALLAPLYGSAEFSQAFCRLCAVRGGVYVLRQQPRALVLETRAEEEGQQGEIAMKAHCKRVVGVCDQHGFTIACKAAVVAQDFLR---PAAAEALHRTWIVRRVSAVH----------GTPGQG---------MERVISVTLPHAVD----------------GHSAAVFAMHMDDTSLVCPAGRGFS-VLHLTMEWEATPAMDSKEAIEAGLREAGE---------------------------------CLRRTAASLLALSQSRELWHLGFA-----KPRPRKPPLAAAKVSGLHLAPRLAPHLDPFAVLAQARNIFQDLAPGEPFLVQDEEDLAAQAAMRGEAEDEDQAMLEAA 576
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A6A3NAC0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NAC0_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.420e-40 Identity = 157/556 (28.24%), Postives = 250/556 (44.96%), Query Frame = 1
Query: 970 DLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGA-----------------DVFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNREA-ASGDFDADAHAGKPFSGFL-RGCGLPERVRAMITHALALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGGACVIHLTTTT-TRAGEVNDSGQAGVESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRASKELLAAAGVEEIWSLGFSWD---------------IQDPPRPEDLPANMVVCE----------------RPGQ------ELYLHDVVVQAERDFARLFPGEPFWP 2463
+L+R S SF++D+ +++L++ V+ L+ SGV YLEF ++ Y+ PA S A DVF +KLL +EKR+LMKFL F +D+G ED+ ++NE L GR+L+RPQN+ + A GD + + + +PF L + L +++ ++ + + L + ++ EGLEAVYR+++++GRF TAF+APLYG+ EL+QSFCR++AV+G I +LR + G V+D + +GV G +V G + + L +G G++LR V + + EG R + V+PP NP A+ V+ LD ACP+ G ++ ++ T + Q+ V++ +T E E +++ A V+ P K +D + AA + WS +W I + +DLPAN VCE +P E++L A F L PGEPF P
Sbjct: 121 ELLRQSSSFSIDVNPRLMLSSEQLVEILITSGVGRYLEFAAIERTYVHFQ---PAVSGAKTGETAEPDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERTLALGRALKRPQNKASQADGDAELEKYLDRPFQELLEKHFKLSSKLQQVVVYCVGLASFPATKNQ---ISAREGLEAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPIDGFVLDTETNELLGVRCSDGDVLRTKHVVTNGSYV-------------------------------DNLRLTSSGKPRHTHGQILRGVFVLKSSLR-EGMSRLMLVIPPEDSEFQNPFAIQVIQLDVGAYACPK---GYFLVQISMPLPTEWFNQAEKQQSLVQAVIRRLTLSSEAELQQKQGT---AKVE-PTPKQTSD-------DNAVEAATTDSSWSDRIAWRAIFTMDHLASSDAKLIDASSKAKDLPANAWVCETSMAEFDGVADPVEPQKPSGNAASPLEIHLESASANARAIFEALCPGEPFLP 624
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: H3GGP8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GGP8_PHYRM) HSP 1 Score: 166 bits (420), Expect = 3.740e-39 Identity = 124/375 (33.07%), Postives = 192/375 (51.20%), Query Frame = 1
Query: 970 DLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGA--------------DVFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNREA-ASGDFDADAHAGKPFSGFL-RGCGLPERVRAMITHALALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPE 2043
+LVR S SF++D+ +++L++ V+ L+ SGV YLEF ++ Y+ + AS AA A DVF +KLL +EKR+LMKFL F +D+G ED+ ++NE L GR+L+RPQN+ + A GD + PF L + L +++ ++ + + L + ++ +GL AVYR++S++GRF TAF+APLYG+ EL+QSFCR++AV+G I +LR + G V+D + GV G +V G + TS+++PT + G++LR V + + EG R + V+PP + NP AV VV LD ACP+
Sbjct: 111 ELVRQSSSFSIDVNPRLMLSSEQLVEILITSGVGRYLEFAAIERTYV--HLQPSASGAAEAEDPDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQADGDAALAEYLDGPFQELLEKHFKLSAKLQQVVVYCVGLASFPATKNQ---ISARDGLAAVYRYVSSIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPIDGFVLDTETKELRGVRCSDGDVLRTKHVVTNGSYVDCLRLTSSERPTHS-------------------------------HGQILRGVFVLRASLR-EGMSRLMLVIPPEDREFQNPFAVQVVQLDAGAYACPK 448
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A662XG14_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG14_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.680e-38 Identity = 122/375 (32.53%), Postives = 197/375 (52.53%), Query Frame = 1
Query: 970 DLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGA-------------DVFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNREAASGDFDADAHAG---KPFSGFLRG-CGLPERVRAMITHALALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACP 2040
+L++ S SF++D++ +++L++ V+ L++SGV YLEF ++ Y+ APAS A A DVF +KLL +EKR+LMKFL F +D+G ED+ ++NE L GR+L+RPQN+ + + D D+DA A +PF L+ L +++ ++ + + L + ++ +GL AVYR+++++GRF TAF+APLYGV E++QSFCR+ AV+G + +LR + ++D ++ G+ G LVV G + A ++Q KTP RG++LR V + + EG R + V+PP + NP A+ +V LD ACP
Sbjct: 95 ELLQQSGSFSIDVSPRLMLSSEQLVELLISSGVGRYLEFAAIERTYVHLPSPAPASRKAEAESDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQASDSDSDALAAYLDRPFQQLLQQHFKLSPKLQQVVVYCVGLATFPSTKNQ---LSARDGLAAVYRYVASIGRFTGTAFLAPLYGVSEVTQSFCRLCAVYGGVYVLRAPVDAFLLDESTREVRGIRCSDGDVLKAKHLVVNGSY--ADCLRLSEQ--KTP------------------------------RGQVLRGVFVLKTSLR-EGMSRLMLVVPPEDDELMNPFAMQIVQLDTGAYACP 431
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A329SF21_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SF21_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.880e-38 Identity = 150/530 (28.30%), Postives = 247/530 (46.60%), Query Frame = 1
Query: 970 DLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGAD-----------VFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNREA-ASGDFDADAHAGKPFSGFL-RGCGLPERVRAMITHALALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGGACVIHLTTTTT-----RAGEVNDSGQAGVESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRA--SKELLAAAGVEEIWSLGFSWDIQDPPRPEDLPANMVVCERPGQELYLHDVV-----------VQAERDFARLFPGEPFWP 2463
+L++ S SF++D+ +++L++ V+ L+ SGV YLEF ++ Y+ +A ++ +D VF +KLL +EKR+LMKFL F +D+G ED+ ++NE L GR+L+RPQN+ + A GD + + +PF L + L +++ ++ + + L + ++ EGL AVYR+++++GRF TAF+APLYG+ EL+QSFCR++AV+G I +LR + G V++ + VGV G +V G + LS +PT R G +LR V + + +G R + V+PP NP A+ VV LD ACP+ G ++ ++ + + + Q+ ++ S +R + K+ A + G + +D + RA + + LA+ +I +DLP N VCE EL ++VV A F L PGEPF P
Sbjct: 120 ELLQKSSSFSIDVNPRLMLSSEQLVETLITSGVGRYLEFAAIERTYVHLQPSASGATTGTSDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNKASQADGDAELAEYLDEPFQSLLEKHFKLSSKLQQVVVYCVGLASFPATKNQ---ISAREGLAAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPINGFVLNNETKELVGVRCSDGDVLRTKHVVTNGSYVDCL---------------RLS----------NDIPT-------RAHGEVLRGVFVLKSSLR-DGMSRLMLVIPPEDSEFQNPFAIQVVQLDVGAYACPK---GFFLVQISMPLPPDWLEQKEKQREMTQSVIKRLILSSEAERTKTQAKDAEDIAQVSETGAIEPQWSDRIAWRAIFTMDHLASGDSSDI-------------NAKDLPVNAWVCETVRGELEQNEVVSPLEIHLESASANARAIFEALCPGEPFLP 597
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A0W8C4L4_PHYNI (Rab escort protein 1 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C4L4_PHYNI) HSP 1 Score: 162 bits (410), Expect = 5.940e-38 Identity = 153/536 (28.54%), Postives = 239/536 (44.59%), Query Frame = 1
Query: 970 DLVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYL---ASDIAAPASSA-----AGADVFGTKLLTPLEKRRLMKFLLFASDWGLQR-RGEDILSRNEAGLGRGRSLRRPQNREAASGDFDAD--AHAGKPFSGFL-RGCGLPERVRAMITHA--LALLPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGGACVIHLTTTTTRAGEVNDSGQAGV-ESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRASKELLAAAGVEEIWSLGFSW------------DIQDPPRPEDLPANMVVCERPGQEL-----------YLHDVVVQAERDFARLFPGEPFWP 2463
+LV+ S SF++D+ +++L++ V+ L+ SGV YLEF ++ Y+ +D + + + DVF +KLL +EKR+LMKFL F +D+G ED+ ++NE L GR+L+RPQN+ A+ D DA+ A+ PF L + L +++ ++ + LA P ++ +GL AVYR+++++GRF TAF+APLYG+ EL+QSFCR++AV+G I +LR + G V+D + GV G +V G + + S R G LLR V + + +G R + V+PP NP A+ VV LD ACP+ G ++ ++ + QA + +S + E E+ + A NV+ E+ WS +W DI + +DLP+N+ VCE EL +L A F L PGEPF P
Sbjct: 120 ELVQKSSSFSIDVNPRLMLSSEQLVETLITSGVGRYLEFAAIERTYVHFQPTDNSTEPDTVWEVPCSKKDVFQSKLLGMVEKRQLMKFLQFVADYGETHILHEDVKTKNERSLALGRALKRPQNK-ASQADTDAELVAYLDNPFQELLEKHFKLSVKLQQVVVYCVGLATFPASKNQ-----ISARDGLAAVYRYVASIGRFTGTAFLAPLYGISELAQSFCRLSAVYGGIYVLRAPINGFVLDNETRTLTGVRCSDGDVLRTKHVVTNGSYVDCLRLNNV---------------------------------SKRAHGELLRGVFVLKSSLR-DGMNRIMLVIPPEDSEFNNPFAIQVVQLDVGAYACPK---GYFLVQISMPLPTDWFEDKEKQAELMKSVIRRLILSSEAEKRAKNKAKEAENVEND---------------------ATEQNWSDRIAWRAIFTMDHLASGDINVSAKAKDLPSNVWVCETVTGELQQNKGVCPLEIHLESASANARAIFEALCPGEPFLP 591
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A7S3PY16_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY16_9STRA) HSP 1 Score: 161 bits (408), Expect = 6.290e-38 Identity = 175/623 (28.09%), Postives = 264/623 (42.38%), Query Frame = 1
Query: 988 RSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYL--------------------ASDIAAPASS---AAGADVFGTKLLTPLEKRRLMKFLLFASDWGLQRRGED-------------------------------------ILSRNEAGLGRGRSLRRPQNREAASGDFDADAHA---GKPFSGFL-RGCGLPERVRAMITHALAL---LPGGDEGGE-GGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGR---------GRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPENLGG--ACVIHLTTTTTRAGEVNDSGQAGVESQGASITQDREGEEEKEVPAGAHANVDGPEDKDGTDGVLGRASKELLAAAGV--------EEIWSLGFSWDIQDPPRPEDLPANMV-------VCERPGQELYLHDVVVQAERDFARLFPG------------EPFWPPPAGQGEDGDDQAEMLEAAASAVTT 2538
R F LDLT +L A G AV +++SGVA Y EFK + L L D+ P S + DVF TKLL+P++KRRLMKFL +SD+ + + E+ + S NE L +GRSL RPQN+ A+ D + G PF +L L E +R +I HA+AL D+G E TT++G+ + RHL +LG+FG TAF+ PLYG GELSQ+FCR AAVHG +LRR + ++ N GVV + C++ GE P+K H+S H T S++ + R+ RR+ + G + + + R + ++PPG +SI N +H V+LD++ + P + G V+HLTTT+ + E AH VL A++ LL V +E++ L FS++++ E++ +++ +C G L + V+A+R F ++ P E AGQ ED DD+ ++L +A + T
Sbjct: 58 RHFALDLTPSLLYANGAAVSGMIDSGVAEYCEFKSVIGLELLMKQDEPRRRGVRGGANGQNGDDVVIPTLSRVPCSKRDVFQTKLLSPVDKRRLMKFLQISSDYAVAKSIENSANLASGSAKKSGNNEDEIVSTTENESSTVGDVEEEVVTSLNERQLQQGRSLYRPQNKSVATSDLEVLKQCINDGIPFEAYLTEHHKLSENMRNIIIHAMALGSCNAKSDDGPETSSNYTTQDGMNDLCRHLQSLGKFGGTAFLVPLYGSGELSQAFCRSAAVHGGTYLLRRGAQNITLNENR-EVSGVVLNG-----CTYE--DGEVL----------PSK-----HISGAH-VIIPSKMLKKTKTLHDSNKTKVRVYRRISIIRGKLLSKSKVGDAGDSDEQRHIIIIPPGDESIKNSNVIHGVALDESVSISPSSKDGFETTVLHLTTTS---------------------------KSNNEDFRYAHGET-----------VLRHATQSLLTCHEVATHANHDLKELFHLSFSYELE-----EEIDSSVTKNTNGIHICRDRGMSLTVESAFVEAKRLFNKICPNTNSFLKLSDKMDELVKERSAGQEED-DDEVKLLSSALDMMKT 612
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Match: A0A2D4BKD2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKD2_PYTIN) HSP 1 Score: 161 bits (407), Expect = 1.130e-37 Identity = 121/368 (32.88%), Postives = 184/368 (50.00%), Query Frame = 1
Query: 973 LVRLSRSFNLDLTSQVLLATGPAVDALVNSGVASYLEFKDMQALYLASDIAAPASSAAGADVFGTKLLTPLEKRRLMKFLLFASDWG-LQRRGEDILSRNEAGLGRGRSLRRPQNR----EAASGDFDADAHAGKPFSGFL-RGCGLPERVRAMITHALAL----LPGGDEGGEGGGVTTEEGLEAVYRHLSALGRFGETAFIAPLYGVGELSQSFCRMAAVHGAICMLRRQLRGAVVDRNSGRCVGVVDDAGRAFACSFLVVGGEFFAASPPTSTQQPTKTPVPEHLSAPHPXXXXXXETLPTAGTGSSSRVRGRLLRRVVLASGPVAPEGRGRGLCVLPPGLQSIGNPAAVHVVSLDDTTAACPEN 2046
L+R S F++D+ +++L++ V L+ SGV YLE M+ Y+ A + + DVF +KLL +EKR LMKFL F +D+G + GED+ S+NE L GR+L+RPQN+ + G D++ +P L + L +++ ++ + +AL L GD G E +T EGL AV R+++++GRF AF+ PLYGV E++QSFCR+ AV+G I +LR + G VVD + D G ++V + S Q P+ P S +RG LL + L S R + V+PP + + NP AVHV+ LD CP++
Sbjct: 125 LLRQSSHFSIDVNPRLVLSSEEIVQILITSGVGRYLEXAAMEGTYVHLAGAGDSVPCSKKDVFSSKLLGMVEKRMLMKFLQFVADYGETEILGEDVKSKNERELALGRALKRPQNKANXVDETLGASGIDSYLDRPXQELLQKHFKLSAKLQQVVLYCVALASFPLETGDAGAEAQQLTAREGLAAVXRYVASIGRFTGNAFLVPLYGVSEITQSFCRLCAVYGGIYVLRAPIDGLVVDESDP--AAPAKDGG-VIKAQHVIVNASYLP-----SLQAPSNVPT-------------------------SRVLRGVLLLQKSLRSA------MNRFMXVIPPQDEQLQNPFAVHVIQLDHGAXVCPKD 453 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig770.18941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig770.18941.1 >prot_Ecto-sp13_S_contig770.18941.1 ID=prot_Ecto-sp13_S_contig770.18941.1|Name=mRNA_Ecto-sp13_S_contig770.18941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=901bp MSGAAGDVDDFLEDYYDAIVLSTGLGSSILAAALAKAGKSVLYLDCHEYYback to top mRNA from alignment at Ecto-sp13_S_contig770:11455..16883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig770.18941.1 ID=mRNA_Ecto-sp13_S_contig770.18941.1|Name=mRNA_Ecto-sp13_S_contig770.18941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig770:11455..16883+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig770:11455..16883+ >mRNA_Ecto-sp13_S_contig770.18941.1 ID=mRNA_Ecto-sp13_S_contig770.18941.1|Name=mRNA_Ecto-sp13_S_contig770.18941.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2703bp|location=Sequence derived from alignment at Ecto-sp13_S_contig770:11455..16883+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |