prot_Ecto-sp13_S_contig770.18938.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig770.18938.1
Unique Nameprot_Ecto-sp13_S_contig770.18938.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length382
Homology
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: D8LIG9_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG9_ECTSI)

HSP 1 Score: 583 bits (1503), Expect = 1.240e-202
Identity = 342/354 (96.61%), Postives = 346/354 (97.74%), Query Frame = 0
Query:   27 MSGSGRYRSVRAPPXXXHESLRRRIASWAGQEDRPPVDWFPTGHXXXXXXXXXXXXXXXXXXDSSDTASMSSRGRCDSGGSTPGDSSGSFGEGAXXXXXXXXXXXXXXXXX-----KRSRKRDWFKVLLAARNLATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIVEITFVDTRPEGCRTQRMSRVVSDYLLEGASNLAEVAIE 375
            MSG GRYRS+RAPPXXXHESLRRRIASWAGQEDRPPVDWFPTGHXXXXXXXXXXXXXXXXX DSSDTASMSSRGRCDSGGSTPG+SSGSFGEGAXXXXXXXXXXXXXXXXX     KRSRKRDWFKVLLAARNLATCVYA+SYTTTMPVLPFMANRLIYPR P+GAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIVEITFVDTRPEGCRTQRMSRVVSDYLLEGASNLAEVAIE
Sbjct:    1 MSGYGRYRSLRAPPXXXHESLRRRIASWAGQEDRPPVDWFPTGHXXXXXXXXXXXXXXXXXADSSDTASMSSRGRCDSGGSTPGESSGSFGEGAXXXXXXXXXXXXXXXXXXXXXXKRSRKRDWFKVLLAARNLATCVYAVSYTTTMPVLPFMANRLIYPRGPDGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIVEITFVDTRPEGCRTQRMSRVVSDYLLEGASNLAEVAIE 354          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A835YWB9_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB9_9STRA)

HSP 1 Score: 211 bits (537), Expect = 8.940e-63
Identity = 111/204 (54.41%), Postives = 145/204 (71.08%), Query Frame = 0
Query:  140 SRKRDWFKVLLAARNLATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPG------SEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIV 337
            S  ++W  V+ + RN+ T VYA+SYT ++PVLPFMA R +Y    E  G  G      S GV EAWRG+ YG VMSGYY TKMI+AP IGFLSDR+GR+  LVVT LG  ++F +T L G++S+HGL++CRLL+GCFAANGALM AYIRD+VP E Q+SAF+QHSA+WG AY+ A  L+A   +     L +A + M ++A +V
Sbjct:   65 SSAKEWAAVVFSPRNVVTLVYALSYTLSIPVLPFMARRHLYGYRDEFVGPDGKVMIDESPGVPEAWRGIGYGCVMSGYYATKMIAAPLIGFLSDRVGRKMLLVVTFLGSCVTFTLTCLMGRHSLHGLVLCRLLLGCFAANGALMMAYIRDSVPREAQASAFAQHSAAWGMAYVVATPLLAALREDPVRCLVLAAVCMALAALLV 268          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A4Y5Z9U7_9GAMM (TCR/Tet family MFS transporter n=1 Tax=Luteibacter pinisoli TaxID=2589080 RepID=A0A4Y5Z9U7_9GAMM)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-11
Identity = 56/165 (33.94%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  147 KVLLAARNLATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 311
            K +LAA      + AM    T+PV+P +             GD G  GV   WR   +G+ +  Y L + + AP +G LSDR+GRR  L+V+LLG AL++    +   Y    L+  R L G F ++  ++ A+I DT P E +S  F Q  A  G  ++  P L
Sbjct:    2 KPVLAAVLCTAALDAMGVALTLPVMPALL------------GDVGL-GVDLGWR---FGVFIGIYALMQFLLAPAVGALSDRLGRRPVLLVSLLGQALAYAALAVAPSYG--WLLAARALAGVFGSSTPVVSAFIADTTPAEERSRRFGQLGACMGVGFIVGPLL 148          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A1G2F2B9_9BACT (MFS domain-containing protein n=1 Tax=Candidatus Niyogibacteria bacterium RIFCSPLOWO2_12_FULL_41_13 TaxID=1801726 RepID=A0A1G2F2B9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 6.560e-11
Identity = 48/150 (32.00%), Postives = 76/150 (50.67%), Query Frame = 0
Query:  162 MSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 311
            +SY   +P LPF A +        G G            G + GL+ + Y L++ I  P+IG LSDR+GRR+ ++ +LLG ALS L       ++   L++ R+  G F +   +  AY+ D  P E ++ A     A++G  ++A PAL
Sbjct:   20 LSYGILIPFLPFYAEKF-------GGG------------GFSIGLLFAAYALSQFIFTPFIGRLSDRIGRRRIIIFSLLGEALSLLALVF--AFAYWWLLLVRIFGGIFGSIAGVAQAYLSDITPAEKKTKAMGYFGAAFGAGFIAGPAL 148          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A7H6K9_ANADF (Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) TaxID=404589 RepID=A7H6K9_ANADF)

HSP 1 Score: 70.5 bits (171), Expect = 1.070e-9
Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 0
Query:  162 MSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 311
            + +   +PV+P  A RL               G  EAW G    L+ +GY   + + AP  G LSDR+GRR  L+V++   A++F +  L G +++  L++ RL  G   AN A+  A++ D  PPE ++       A++G  ++  PAL
Sbjct:   19 LGFGMVIPVMPLYAERL---------------GASEAWTG----LLSAGYSAMQFVFAPIWGRLSDRVGRRPVLLVSIAMTAVAFALYGLAGTFAM--LLVSRLFAGAATANIAIARAFVADVTPPEGRARGMGIIGAAFGLGFVLGPAL 147          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: UPI001F59A106 (MFS transporter n=1 Tax=Anaeromyxobacter sp. SG63 TaxID=2925408 RepID=UPI001F59A106)

HSP 1 Score: 70.5 bits (171), Expect = 1.120e-9
Identity = 50/161 (31.06%), Postives = 77/161 (47.83%), Query Frame = 0
Query:  150 LAARNLATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPA 310
            LA   +   V  + +   +PV+P  A  L               G  EAW G    L+ +GY   + + AP  G LSDR+GRR  L+V++   A +FLV  L G +++  L+  RL  G   AN A+  A++ D  PPE ++       A++G  ++  PA
Sbjct:    7 LAILFVIVFVDLLGFGMVIPVMPLYAKAL---------------GASEAWTG----LLSTGYSAMQFVFAPIWGRLSDRVGRRPVLLVSIFMTAAAFLVYGLAGSFAV--LLASRLFAGAATANIAIARAFVADVTPPEGRARGMGLIGAAFGLGFVLGPA 146          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A1F4GGQ8_9BURK (Tetracycline transporter n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1F4GGQ8_9BURK)

HSP 1 Score: 70.1 bits (170), Expect = 1.580e-9
Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 0
Query:  161 AMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGD 317
            AM +     +L  M+  +I P  P+  G   + G   +   +AYGL  + + + +  SAP +G LSDR GRR  L++ L G A++F VT L  ++ +  L+  R++ G   AN A+ +AY+ D   PE ++  +    A +G  ++  P L    GD
Sbjct:   10 AMPFIMITVLLDMMSIGIIAPVLPKLIGTFMASGASTS---VAYGLAQAAFAVAQFFSAPVLGALSDRYGRRPVLLLGLFGMAINFFVTALATEFWM--LLAVRIMGGAVCANIAVANAYVADITEPEDRAKNYGLLGAMFGVGFILGPVLGGLLGD 161          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A522AKY7_9BACT (MFS transporter n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A522AKY7_9BACT)

HSP 1 Score: 69.7 bits (169), Expect = 2.200e-9
Identity = 43/125 (34.40%), Postives = 65/125 (52.00%), Query Frame = 0
Query:  201 GMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSF----LVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGD-SAD 320
            G   GL+M+ +   + I APW G LSDRMGRR  L++++ G  +++    L T+L G  ++  +I  R+  G   AN  +  AYI D  PPE +S        ++G  ++  P    W G  SAD
Sbjct:   38 GFELGLLMASFSAMQFIFAPWWGHLSDRMGRRPVLLISIAGSVVAYAWFALATRLTGATALWMIIASRVFAGICGANITVAQAYIADITPPEHRSKRMGLIGMAFGLGFIFGP----WIGGRSAD 158          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A1F6C8N1_HANXR (MFS domain-containing protein n=1 Tax=Handelsmanbacteria sp. (strain RIFCSPLOWO2_12_FULL_64_10) TaxID=1817868 RepID=A0A1F6C8N1_HANXR)

HSP 1 Score: 68.9 bits (167), Expect = 3.520e-9
Identity = 52/157 (33.12%), Postives = 76/157 (48.41%), Query Frame = 0
Query:  155 LATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWRGMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPAL 311
            L   +  + +   +P+LP+ A          GAG             +A  L+ S Y L + + AP  G LSDR+GRR  LV++L G ALS+L+  L G  S+  L   RLL G  AAN +   AYI D   PE ++       A++G  ++  PA+
Sbjct:   11 LTVFIDLLGFGIVLPLLPYYAEGF-------GAGP------------LAVTLLSSSYSLMQFLFAPVWGRLSDRVGRRPILVLSLAGSALSYLLFGLAG--SLAALFATRLLAGVCAANISTAQAYIADVTTPETRAKGMGMIGAAFGLGFIFGPAV 146          
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Match: A0A7C1W9V9_9BACT (MFS transporter n=1 Tax=Candidatus Fraserbacteria bacterium TaxID=2268184 RepID=A0A7C1W9V9_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 3.720e-9
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 0
Query:  205 GLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTKLWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSASWGCAYLAAPALIAWAGD 317
            GL+M+ Y L + I AP  G +SDR+GRR  ++++LLG  L++ +  L     +  L + RLL G F  N +   AYI D  PPE ++        ++G  ++  PAL  W G 
Sbjct:   43 GLLMASYSLMQFIFAPIWGQISDRVGRRPIILLSLLGSVLAYTLFGLASSLPL--LFLARLLAGLFGGNISAAQAYIADITPPEERARGMGLIGMAFGLGFIFGPALGGWLGS 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig770.18938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIG9_ECTSI1.240e-20296.61Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
A0A835YWB9_9STRA8.940e-6354.41Major facilitator superfamily domain-containing pr... [more]
A0A4Y5Z9U7_9GAMM1.030e-1133.94TCR/Tet family MFS transporter n=1 Tax=Luteibacter... [more]
A0A1G2F2B9_9BACT6.560e-1132.00MFS domain-containing protein n=1 Tax=Candidatus N... [more]
A7H6K9_ANADF1.070e-931.33Major facilitator superfamily MFS_1 n=1 Tax=Anaero... [more]
UPI001F59A1061.120e-931.06MFS transporter n=1 Tax=Anaeromyxobacter sp. SG63 ... [more]
A0A1F4GGQ8_9BURK1.580e-931.21Tetracycline transporter n=2 Tax=Burkholderiales T... [more]
A0A522AKY7_9BACT2.200e-934.40MFS transporter n=1 Tax=Verrucomicrobia bacterium ... [more]
A0A1F6C8N1_HANXR3.520e-933.12MFS domain-containing protein n=1 Tax=Handelsmanba... [more]
A0A7C1W9V9_9BACT3.720e-935.40MFS transporter n=1 Tax=Candidatus Fraserbacteria ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 142..367
e-value: 1.2E-26
score: 95.4
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 156..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 316..320
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 234..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 254..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 321..342
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 282..292
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 343..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 293..315
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..233
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..144
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 203..225
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 155..347
e-value: 1.3E-22
score: 80.2
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 222..238
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 149..382
score: 9.846
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 140..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig770contigEcto-sp13_S_contig770:1228..3645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig770.18938.1mRNA_Ecto-sp13_S_contig770.18938.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig770 1226..3645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig770.18938.1 ID=prot_Ecto-sp13_S_contig770.18938.1|Name=mRNA_Ecto-sp13_S_contig770.18938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
LLSLHHRDPEPAGDQPATRRASTGAAMSGSGRYRSVRAPPPPPHESLRRR
IASWAGQEDRPPVDWFPTGHHHHHGGGGGGGGGHGGRADSSDTASMSSRG
RCDSGGSTPGDSSGSFGEGAGGGGSTTTTTAPPGGGGKRSRKRDWFKVLL
AARNLATCVYAMSYTTTMPVLPFMANRLIYPRDPEGAGDPGSEGVREAWR
GMAYGLVMSGYYLTKMISAPWIGFLSDRMGRRQALVVTLLGGALSFLVTK
LWGQYSIHGLIMCRLLMGCFAANGALMHAYIRDTVPPEWQSSAFSQHSAS
WGCAYLAAPALIAWAGDSADAILTVATMTMIISAAIVEITFVDTRPEGCR
TQRMSRVVSDYLLEGASNLAEVAIEGARDLAE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
IPR036259MFS_trans_sf