prot_Ecto-sp13_S_contig77.18933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77.18933.1
Unique Nameprot_Ecto-sp13_S_contig77.18933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
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BLAST of mRNA_Ecto-sp13_S_contig77.18933.1 vs. uniprot
Match: A0A6H5KLN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN5_9PHAE)

HSP 1 Score: 560 bits (1444), Expect = 3.160e-199
Identity = 301/349 (86.25%), Postives = 312/349 (89.40%), Query Frame = 0 
Query:    1 MKASLVFTINVILSVAATSADECYDICADVKKSVGFKAGCSEFRNSLPRPKVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGAXXXXXXXXXXXXXXXXYRSGVKDMTTSLGKLMAEASPPVITALKGDTLSRQAAHKTHAVATDDSKTVEGISEEPI----DAIARPSQMADLSYNGKDTPVPEEKEHGEAQILESQGGLQTDAQAISDEPRLAADDIYNVEDKPDLERDADKALIAPDGEMDAHQELPEIKDGEHKGEDNYMWIEHEEGNVLLSLPITVDNVLKELVIFEGDQPLDVVLGFCRDNMPEEGPACADELIRVVQDKISTGKAPQEEYI 345
            MKA LVFTINVILSV ATSADEC+DICA+VKKSVGFKAGCSEFRNSLPRPKVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGA        XXXXXXXXYRSGVKDMTTSLGKLMAEASP VITALKG+TLSRQAA KTH VATDDSKTVEG SE PI    DAIARPSQMADLS +G DTPVPEEKEHGEAQ LES+GGLQTDAQ I DEP LAA DIY VED+PDL RDAD ALIAPDGEMDA  +L  IKDGE+KGEDNYMWIE E+ NVLLSLPITVDNVLKELVI +GDQPLDVVL FCR+NMPEEGPACADELIRVVQDKISTGKAPQEEYI
Sbjct:   24 MKAPLVFTINVILSVTATSADECHDICANVKKSVGFKAGCSEFRNSLPRPKVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGALNDTPRPLXXXXXXXXYRSGVKDMTTSLGKLMAEASPAVITALKGNTLSRQAAQKTHVVATDDSKTVEGTSEGPIAFAEDAIARPSQMADLSDHGNDTPVPEEKEHGEAQDLESKGGLQTDAQVIGDEPPLAAGDIYKVEDEPDLARDADSALIAPDGEMDAQHKLAAIKDGENKGEDNYMWIEDEKENVLLSLPITVDNVLKELVIVKGDQPLDVVLAFCRENMPEEGPACADELIRVVQDKISTGKAPQEEYI 372
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BLAST of mRNA_Ecto-sp13_S_contig77.18933.1 vs. uniprot
Match: D7FJ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ15_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 1.710e-118
Identity = 204/345 (59.13%), Postives = 214/345 (62.03%), Query Frame = 0 
Query:    1 MKASLVFTINVILSVAATSADECYDICADVKKSVGFKAGCSEFRNSLPRPKVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGAXXXXXXXXXXXXXXXXYRSGVKDMTTSLGKLMAEASPPVITALKGDTLSRQAAHKTHAVATDDSKTVEGISEEPIDAIARPSQMADLSYNGKDTPVPEEKEHGEAQILESQGGLQTDAQAISDEPRLAADDIYNVEDKPDLERDADKALIAPDGEMDAHQELPEIKDGEHKGEDNYMWIEHEEGNVLLSLPITVDNVLKELVIFEGDQPLDVVLGFCRDNMPEEGPACADELIRVVQDKISTGKAPQEEYI 345
            MKA L FT+NVILSV ATSADEC+DICADVKKSVGFKAGCSEFRNSLPRPK                                                                                P+  A                         EG       AIARPSQMADLSY+GKDTPVPEEKEHGE Q+LES+GGLQTDAQA+ D P LA  DIY VED+PDL RDAD ALIAPDGE DA  ELPEIKDGE+KGEDNYMWIEHEE NVLLSLPITVDNV+KELVIFEGDQPLDVVL FCRDNMPEEGPACADELIRVVQDKISTGKAPQEEYI
Sbjct:    1 MKAPLAFTVNVILSVTATSADECHDICADVKKSVGFKAGCSEFRNSLPRPK--------------------------------------------------------------------------------PIAFA-------------------------EG-------AIARPSQMADLSYHGKDTPVPEEKEHGEIQVLESKGGLQTDAQAMGDGPPLAVGDIYKVEDEPDLARDADSALIAPDGETDAQHELPEIKDGENKGEDNYMWIEHEEENVLLSLPITVDNVMKELVIFEGDQPLDVVLAFCRDNMPEEGPACADELIRVVQDKISTGKAPQEEYI 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77.18933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLN5_9PHAE3.160e-19986.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ15_ECTSI1.710e-11859.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..345
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.693

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77contigEcto-sp13_S_contig77:7901..10248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77.18933.1mRNA_Ecto-sp13_S_contig77.18933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77 7870..10420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77.18933.1 ID=prot_Ecto-sp13_S_contig77.18933.1|Name=mRNA_Ecto-sp13_S_contig77.18933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MKASLVFTINVILSVAATSADECYDICADVKKSVGFKAGCSEFRNSLPRP
KVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGALKDTPR
PLCHDACVRGYRSGVKDMTTSLGKLMAEASPPVITALKGDTLSRQAAHKT
HAVATDDSKTVEGISEEPIDAIARPSQMADLSYNGKDTPVPEEKEHGEAQ
ILESQGGLQTDAQAISDEPRLAADDIYNVEDKPDLERDADKALIAPDGEM
DAHQELPEIKDGEHKGEDNYMWIEHEEGNVLLSLPITVDNVLKELVIFEG
DQPLDVVLGFCRDNMPEEGPACADELIRVVQDKISTGKAPQEEYI*
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