mRNA_Ecto-sp13_S_contig7697.18928.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7697.18928.1
Unique NamemRNA_Ecto-sp13_S_contig7697.18928.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: A0A6H5JBB4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB4_9PHAE)

HSP 1 Score: 626 bits (1615), Expect = 1.450e-216
Identity = 358/500 (71.60%), Postives = 366/500 (73.20%), Query Frame = 1
Query:    1 VASEERRGAGTSPGKALRRNTGGEGLVVQVLLSPEATGSRESALASLAESWKRSWASDSLNLSRLSFWSDADGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGTGDYTYDLSQRK---------------------------------------------------------------------------------------YDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARVHSASWGFIDEPCTVDESAVSFDEWAYE 1239
            VASEERRGAGT PGKALRRNTGGEGLVVQ+LLSPEATGSRESALA+LAESWKRSW+SDSL+LSRLSFWSDADGHRPREADDEQA  PP  AADFLAREWG AARTVH LAERLGGVSPAEACGWNGVRV AEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAP      XXXXXXXXXXXXX                             SASEREKTACLMGLVSFLAARPEV RVSALPRAELFNAVAGRIVQGGSATTQPIWDRG DGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLG GDYTYDLSQRK                                                                                       YDCDVYWE ACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGAR+HSASWGFIDEPCTVD+S+VSFD+WAYE
Sbjct:  208 VASEERRGAGTLPGKALRRNTGGEGLVVQLLLSPEATGSRESALAALAESWKRSWSSDSLDLSRLSFWSDADGHRPREADDEQAPSPPRTAADFLAREWGSAARTVHALAERLGGVSPAEACGWNGVRVTAEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAPPPRQVRXXXXXXXXXXXXXVNGNRSAGSSGGHPASGDRGMDDGSGSA-SASEREKTACLMGLVSFLAARPEVVRVSALPRAELFNAVAGRIVQGGSATTQPIWDRGVDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGAGDYTYDLSQRKVVQYIESTRGDDVYSEDDPDGHGSHVAGSVAGSIYSGWTGPANCPDGVGDATEEQTAMSCVGVCLDPEVLEEYISDNTFDLDALCPEYDCDVYWEAACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSSVSFDQWAYE 706          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D8LK25_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK25_ECTSI)

HSP 1 Score: 621 bits (1602), Expect = 2.420e-210
Identity = 340/414 (82.13%), Postives = 349/414 (84.30%), Query Frame = 1
Query:    1 VASEERRGAGTSPGKALRRNTGGEGLVVQVLLSPEATGSRESALASLAESWKRSWASDSLNLSRLSFWSDADGHRPREADDEQATPPPLI-AADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGTGDYTYDLSQRKYDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARVHSASWGFIDEPCTVDESAVSFDEWAYE 1239
            +AS ERRGAGT PGKALR NTGGEGLVVQ+LLSPE TGSRESALA+LA+SWKR W+SD L+L RLSFWSDADGHRPREA DEQA       AADFLAREWG AARTVH LAERLGGVSPAEACGWN VRVAAEGGGRSSSAGWVTLRDIGHLL  A RD+ A             XXXXXXXXX                           SASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRG DGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRD DGTLG GDYTYDLSQRKYDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGAR+HSASWGFIDEPCTVD+SAVSFDEWAYE
Sbjct:  208 MASGERRGAGTLPGKALRHNTGGEGLVVQLLLSPETTGSRESALAALAQSWKRGWSSDLLDLGRLSFWSDADGHRPREAGDEQAPXXXXXTAADFLAREWGSAARTVHALAERLGGVSPAEACGWNDVRVAAEGGGRSSSAGWVTLRDIGHLLHGAERDERAQPPRQARSSDTSGXXXXXXXXXSAGSSGGHPASGDGGMDDGSGSA----SASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGVDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDSDGTLGAGDYTYDLSQRKYDCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARIHSASWGFIDEPCTVDDSAVSFDEWAYE 617          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D7G6L6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L6_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 6.270e-26
Identity = 104/352 (29.55%), Postives = 144/352 (40.91%), Query Frame = 1
Query:  169 SDSLNLSRLSFWSDA------DGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPV---AGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGT---------------------GDYTYDLSQRKY-----------------DCDVYWETACLSDDRSETLEDAKGVAPGAKLAVLDL 1083
            S+SL++   SFWS        D      A D     P     + LAREW  AA  + GL    GG +  + C W+G+ V        +    +T++ + HLLP    AG ++                                                     ++  + AC M L+SFLA+RPEV RVS     +L NA A   VQ  + T  P+ D G DG+GEV+Q+VD+G+D  SCFF D     G  HG+  +  G   +                     GD+ +DLS+RKY                 DCD   E  CL DD +ETL+   GVA GA+LA+ D+
Sbjct:    2 SESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGP----GEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVV------HTDDDLLTMKGMDHLLPEGRGAGGNE--------------------------------------------------GPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDFNLQIARVFTGGDFNFDLSRRKYFWAGYEAIDLDRLCPRLDCDDRPEEYCLGDDEAETLQQHGGVARGAQLAIFDI 293          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 6.900e-19
Identity = 89/308 (28.90%), Postives = 122/308 (39.61%), Query Frame = 1
Query:  139 LAESWKRSWASDSLNLSRLSFWSDA------DGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPV---AGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGT---------------------GDYTYDLSQRK 972
            L + W+    S SL++   SFWS        D      A D     P     + LAREW  AA  + GL    GG +  + C W+G+ V        +    +T++ + HLLP    AG ++                                                     ++  K AC M L+SFLA+RPEV RVS     +L NA A   VQ  S T  P+ D G DG+GEV+Q+VD+G+D  SCFF D     G  HGY  +  G   +                     GD+ +DLS+RK
Sbjct:  256 LTDEWREELMSQSLDVHDKSFWSSGWSAKLPDEAAAEGAGDSSGGGP----GEVLAREWTRAADVLRGLGGTEGGPTIGDVCSWDGLVVV------HTDDDLLTMKGMDHLLPEGRGAGGNE--------------------------------------------------GPEADELKVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSASLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGYYFEEIGVEASSFGSWFTSWDFNVQIARVFTGGDFNFDLSRRK 503          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.080e-18
Identity = 100/315 (31.75%), Postives = 132/315 (41.90%), Query Frame = 1
Query:    4 ASEERRGAG----TSPGKALRRNTGGEGLVVQVLLSPEATGSRESALASLAESWKRSWASDSLNLSRLSFWSDA--DGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKT----ACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRD 918
            A EE R +G    ++   A  R    EGL V+  L+P    +R S   S          S S++L   +FWSD   DG     A +  ++P    A    AR+W  AA  VH L+E      P + C WN  R+     G  S    + +  + HLL  +GR                                                      + E E T    AC MGLVSFLA RPEV RVS  P   + NA A  ++Q  SAT  P+ D G DG+GE++QV+DSG+DE SC+F D +     DHGY  D
Sbjct:  158 AEEEARSSGLDRLSARHGARMRKPNVEGLSVE--LTPGTLAARSSEAKSFINHMLGDLMSASVDLHSTNFWSDPGMDG-----AGEHLSSP----AGAVRARDWRKAASVVHELSEAAS-TGPGDICSWN--RIFVHHAGDDS----LLVSGLDHLL-FSGRG--------------------------------------------------AGGSHEEESTELHVACFMGLVSFLAGRPEVLRVSPRPTKRVLNAAARGVIQSASATDTPLTDAGLDGTGEIIQVIDSGLDETSCYFIDDSGEE-VDHGYYFD 402          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.840e-18
Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 1
Query:  649 KTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDY-----DGTLGT--GDYTY--DLSQRK 972
            +TAC MGL+S LAA+PEV RVS L  A L NAVA  +VQ  + T  P+ D G DG+GEV+QVVDSG+DE SCFF D    L  +HG+L D      DG + T  G+Y++  D+S+RK
Sbjct:  292 RTACYMGLLSQLAAKPEVLRVSPLQSARLHNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDSGLDETSCFFADD-DGLQVEHGFLFDGVRVEDDGNVSTVLGNYSFPFDMSRRK 407          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.740e-18
Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 1
Query:  634 ASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLR-----DYDGTLGT--GDYTY--DLSQRK 972
            A    +TAC MGL+S LAA+PEV RVS L  A L+NAVA  +VQ  + T  P+ D G DG+GEV+QVVD+G+DE SCFF D    L  +HG+L      + DG + T  G+Y++  D+S+RK
Sbjct:  240 APSEARTACYMGLLSQLAAKPEVLRVSPLQSASLYNAVANALVQSATTTETPLLDAGLDGTGEVIQVVDTGLDETSCFFADD-DGLQVEHGFLFGGVRVEGDGNVSTVLGNYSFPFDMSRRK 360          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 9.270e-17
Identity = 97/318 (30.50%), Postives = 129/318 (40.57%), Query Frame = 1
Query:   70 EGLVVQVLLSPEATGSRESALASLAESWKRSWASDSLNLSRLSFWSDADGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPVAGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKT----ACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRD--YDGTLGT-----------GDYTYDLSQRK 972
            EGL V+  L+P+   +R +   S          S S++L   +FWSD     P  A  E  +          AR+W  AA  VH L+E  G  SP + C W+ V +   G         + +  + HLL  +GR                                                      + E E T    AC MGLVSF A RPEV RVS      + N  A  I+Q  SAT  P+ D G DG+GEV+QVVD+G+DE SCFF D       DHGY  +  + G+ G+           GD+TY   +RK
Sbjct:  187 EGLNVK--LTPDTLPARSAGAESFIIDLLGDLMSASVDLHSTNFWSD-----PVMAGGEHLS---SHGGAVRARDWSKAASVVHELSEAAG-TSPGDICSWDEVALIQAGDDS------LLVTGLDHLL-FSGRG--------------------------------------------------AGGSHEEESTELHVACFMGLVSFFAGRPEVLRVSPRHTKRVLNEAARGIIQSASATDTPLTDAGLDGTGEVIQVVDTGLDETSCFFIDDGGEE-VDHGYFFEELFVGSTGSSQLIYYPVFEAGDFTYTEERRK 435          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: D8LBZ2_ECTSI (Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ2_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 9.540e-16
Identity = 84/298 (28.19%), Postives = 119/298 (39.93%), Query Frame = 1
Query:  169 SDSLNLSRLSFWSDA------DGHRPREADDEQATPPPLIAADFLAREWGGAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGHLLPV---AGRDDHAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRDYDGTLGT---------------------GDYTYDLSQRK 972
            S+SL++   SFWS        D      A D     P     + LAREW  AA  + GL    GG +  + C W+G+ V        +    +T++ + HLLP    AG ++                                                     ++  + AC M L+SFLA+RPEV RVS     +L NA A   VQ  + T  P+ D G DG+GEV+Q+VD+G+D  SCFF D     G  HG+  +  G   +                     GD+ +DLS+RK
Sbjct:    2 SESLDVHGKSFWSSGWSAKLLDEAAAEGAGDSLGGGP----GEVLAREWTRAADVLRGLGGAEGGPTIGDVCSWDGLVVV------HTDDDLLTMKGMDHLLPEGRGAGGNE--------------------------------------------------GPEADELQVACFMALLSFLASRPEVLRVSPARAIKLLNAAAYHNVQSANLTESPMTDAGLDGTGEVIQIVDTGLDVNSCFFVDEDGGEGVAHGHYFEEIGVEASALSSWFTSWDFNLQIARVFTGGDFNFDLSRRK 239          
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.420e-15
Identity = 49/88 (55.68%), Postives = 58/88 (65.91%), Query Frame = 1
Query:  655 ACLMGLVSFLAARPEVARVSALPRAELFNAVAGRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPDHGYLRD 918
            AC MGLVS LA RPEV RVS  P   + NA A  IVQ  SAT  P+ D G DG+GE++QV+DSG+DE SC+F D +     DHGY  D
Sbjct:   30 ACFMGLVSVLAGRPEVLRVSPRPTKRVLNAAARGIVQSASATDTPLTDAGLDGTGEIIQVIDSGLDETSCYFIDDSGEE-VDHGYYFD 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7697.18928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBB4_9PHAE1.450e-21671.60Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LK25_ECTSI2.420e-21082.13Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G6L6_ECTSI6.270e-2629.55Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JKA8_9PHAE6.900e-1928.90Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LNG6_ECTSI2.080e-1831.75Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LSW0_ECTSI2.840e-1852.14Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LU20_ECTSI3.740e-1849.18Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5K229_9PHAE9.270e-1730.50Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
D8LBZ2_ECTSI9.540e-1628.19Subtilisin (Fragment) n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K365_9PHAE3.420e-1555.68Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7697contigEcto-sp13_S_contig7697:98..4274 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score127.1
Seed ortholog evalue1.9e-26
Seed eggNOG ortholog2880.D8LNG6
Model size1239
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
Ec32 ortholog descriptionKP-43 peptidase
Ec32 orthologEc-06_007900.1
Cds size1239
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464040.1013155-CDS-Ecto-sp13_S_contig7697:97..3641681464040.1013155-CDS-Ecto-sp13_S_contig7697:97..364Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7697 98..364 -
1681464040.1195655-CDS-Ecto-sp13_S_contig7697:2739..28801681464040.1195655-CDS-Ecto-sp13_S_contig7697:2739..2880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7697 2740..2880 -
1681464040.1311357-CDS-Ecto-sp13_S_contig7697:3443..42741681464040.1311357-CDS-Ecto-sp13_S_contig7697:3443..4274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7697 3444..4274 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7697.18928.1prot_Ecto-sp13_S_contig7697.18928.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7697 98..4274 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7697.18928.1

>prot_Ecto-sp13_S_contig7697.18928.1 ID=prot_Ecto-sp13_S_contig7697.18928.1|Name=mRNA_Ecto-sp13_S_contig7697.18928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=413bp
VASEERRGAGTSPGKALRRNTGGEGLVVQVLLSPEATGSRESALASLAES
WKRSWASDSLNLSRLSFWSDADGHRPREADDEQATPPPLIAADFLAREWG
GAARTVHGLAERLGGVSPAEACGWNGVRVAAEGGGRSSSAGWVTLRDIGH
LLPVAGRDDHAPPPRQVRSSDTTVGGGGSGGGRNGNRSAGSSGGHPASGD
REMDDGGGSASASEREKTACLMGLVSFLAARPEVARVSALPRAELFNAVA
GRIVQGGSATTQPIWDRGGDGSGEVVQVVDSGIDEGSCFFRDSATTLGPD
HGYLRDYDGTLGTGDYTYDLSQRKYDCDVYWETACLSDDRSETLEDAKGV
APGAKLAVLDLGSSDSLEQALGGTMWEVSAGTGARVHSASWGFIDEPCTV
DESAVSFDEWAYE
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mRNA from alignment at Ecto-sp13_S_contig7697:98..4274-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7697.18928.1 ID=mRNA_Ecto-sp13_S_contig7697.18928.1|Name=mRNA_Ecto-sp13_S_contig7697.18928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4177bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7697:98..4274- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGCGTCGGAGGAGCGGCGGGGGGCGGGAACGTCGCCGGGGAAGGCCTT GCGGCGCAACACCGGGGGGGAGGGCTTGGTGGTGCAGGTGCTGCTGTCCC CAGAAGCCACCGGCAGCAGAGAGAGCGCGCTGGCTTCCCTCGCAGAGAGC TGGAAGCGAAGCTGGGCGTCGGACTCGTTGAACCTGAGCAGGTTGTCCTT CTGGTCCGACGCTGACGGCCACCGCCCACGTGAGGCAGACGACGAGCAGG CTACTCCTCCTCCTCTTATTGCTGCGGATTTCCTGGCCAGAGAGTGGGGC GGCGCAGCCCGGACGGTGCACGGCCTGGCCGAGCGACTCGGTGGGGTCTC CCCCGCGGAGGCGTGCGGTTGGAACGGCGTCAGGGTGGCGGCGGAAGGAG GAGGTCGGTCGTCATCGGCCGGCTGGGTCACCTTGCGCGACATCGGCCAC CTCCTTCCCGTCGCCGGAAGAGACGACCACGCTCCCCCCCCCCGGCAAGT TCGTTCTTCGGACACCACCGTCGGAGGCGGCGGCAGCGGTGGCGGCAGAA ACGGTAACCGTTCGGCAGGGAGTTCCGGCGGCCACCCTGCGTCGGGAGAC CGTGAGATGGATGACGGCGGTGGTAGCGCTAGCGCCAGCGAGCGAGAGAA GACGGCGTGTCTGATGGGACTCGTTTCCTTCCTGGCGGCGAGGCCCGAGG TGGCCAGGGTGTCGGCGCTGCCGAGGGCGGAGCTGTTCAACGCGGTGGCC GGTCGCATCGTGCAGGGGGGCTCGGCGACGACCCAGCCGATCTGGGACCG GGGGGGGGACGGGTCGGGAGAGGTGGTCCAGGTGAGGAAAGAGGGGGGGG GGCAGGGGAGGCGGACGAACAGAGGGAAGGAAGTTTGAAATATTATCCTG AAGACAGAATTTGAAGCAGGTAGAGAGAGGCACGGGGTAAGCGACGGAGG TTGTGGCTAGAGGGAGTAGGAAAAGGTGGGCTCACGGAGGAGCAGCCTTG TCACAGAGACCGTTTTCGGTCGCGTGCTACATGTAGTTGGTACCGCTGCT TGTTTCGGACGAACGAAGTGAGAAGCCTCTCTGTTGCGGCGCGGCCGAGG TAGATTTGTCGAGTTGTGACGTTCAATGTTTTGATCACCTTCTTTTTGCA TGTTTGTGTTTCGACCCTGCACGTTAAAAGATGCGCCAGACAAAGTCCAC CCAACCGTCGTTTTCTTTTCTTTCGCGGCGACGAGACGACGAGGTCGCGG AGTGTTGATTGTCATTGTTTCTGTTTTTTTCAGGTTTGCTCTTCACACTA GCCCACTAGTGTGCGTGTTTTCGATCTGGTTTACGGTAAACCCTTCCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCATGAGGTGGTC GACTCGGGCATCGACGAGGGCTCCTGTTTCTTCAGGGACTCGGCGACTAC CCTGGGCCCCGACCACGGGTACCTCCGTGACTACGACGGCACCCTCGGGA CTGGAGACTACACGTATGACCTCTCACAGCGAAAGGTGGTCCAATGTGAG TCTTATGTACATATCTGTCTTGCACGTCATCGATATCCGCGGGTCAGTAG TTGTAGTTGTTGGTGGTGCTGGTGGTGGTGTTAGTACTGATGTTGTTGTT GTTGTTGATGTTGTCGTCACAGTAAATACCGTTCCAGTCTCTGCTCAGTA CCTTCTACTATTCGTACCGGCCTGTCCAACTGACACGGATGCCCACCGTG GCCACAGGCGGACTCCCCGAAAGACTCAAGACACTTGTTTTTGATGCAAT AGGCGGGGAAGGAGCGAGCAATGAACTACATTATTCGACAATGTGTGTAG CTTCCATGGGAAGTCATTCAACCAACTGCCATGAAAGTCGCCCACCTTCG GGCAGCGTCCACGAGACGTAAAGAATTTTTAGTTCATTGGAAGCTTGGTG GCACAACTTCCATGGAAGTCTGTCACCCGAGTCCAAAATGAGGTAACATT AGGTGACAACATGTTGTTGGAGTTGGGATTAGTTGCTTGAAGTTGCTTTC ATGGACGTTTTCAATCTTCCATCGAGGTTGCCTGCCGGCAGTGACATACA CTTGGGTGGAAATTGCTTTCGTCGAACTTGTCGTGCTTCCATGGAAGTTG CCTTTCAGCCATGACAAACGCTTTCGTGGAGGCTACTTCCATGGTTGTTG GACTTCGATTAAATGCCTACACAGTTTCGGGGAGGTGTTCGACAGACGAA CTTCCATTGGAGTCATGCCCTTCATGGAAGCTCTTCGCGCTTTCGTGGAA GTGGTTGATGCGACTTCCACCGCTGCTTCCATGGAAGTTGAGCGGCTTCC ATGGAAGTCGATCTACTTCCATTGAAGCTTTGCCATATGTCAAAAAGTGT AGGTCGAGGCGCTTGGTGTTGTAAGGTTTGATGTTCCGTGCGGAGGATGT GTTTGAGGTTTTTCGGCGGCCGAGCGAGAGGCGGGTGAAAGGCGAGAGTG GCGTTGTTGACGTTGTTGCAGAGACTGTGGCCTGGGTCCGACCCACCTCT TCTGTCGCCGCTTGTATGATTTGAGCAGAGTCGGAGGGCTTCCCGTGCTT TAGGTCGTCGTCTTTCCCTGTGAAACCCTGGCTGGCTAAGCTGGACCATG CGCTCGCTCCTCAAAACAGCCGGCCGGGTGGTGGCCATGTCTCACCTTCC TCTCCATCTCCCGAAGGCACCTGCATCCGCCTCCTTTTGGTCAGCGTTTT GCTCCCCATGTGCTATAGTTTAGTTGTTTCTCGACTTGTGTTAATAGAGC AGTGAAGTGACCTTCCCCACAGCCCCGCTCCCCTCGTAGCCTGCAAGTAA GCAAGCAAACACACTTTTTTCTTCGTCATCTCCGTAATCTCCGTAATCTC TTTTGTCTACGCAATATCAGCTGAATCTCCTACCCATGCTGTTCTTGCCC CTCCCCTTACCTCCTGACAACGATAACAACAACAAAAACAATATCAACGT GGTCATCGTCGAAGACATTGAGAGCACGCGAGGGGACGACGTCTACTCCG AGGACGACCCCGACGGGCACGGCTCGCACGTAGCGGGCTCCGTGGCTGGA TCCATCTACTCGGGGTGGACCGGCCCCGCCGACTGCCCGGACGGCGTGGG CGACGCCACGGAGGAGCAGACGGCGCTGTCGTGCGTGGGCGTTTGCCTGG ATCCCGAGGTGCTGGACGAGTACGTTAGCGACAACACCTTTGATCTGGAC GCTCTCTGCCCCGAGGTATTGTATTGTGTGTGTGTACTGCCGTGTTTTGG CTTGTTTTGTTGCATGGTAACAGCTGTTGTTGCTGTGCCTTTGGCTTGCT TGCCGCAAGGGGTCTTGGTTGCCTTTTTTTTTTTTCGCGCTGCTGATAGG TGTTTGCTGCAAACGATTTCTTCCGACTGAGGTGGTTGGTTGGTAGAAAG GCGTGCGGGGGGGCGGGAGGGGTTCTCCCGTTTTTTCGTTGTTGCGTTGT TTGGCTTCCAGACTTGTACAGCTATTGCTGGTCTTGAGGGCGCGCTGGCT GCGCTGAGCTGGGGTGTTTCCATGTTCACACCCTGCGGCTAAGGAGACTG TGGGAATATTATGAACGGGATGAAGAGTACCGTAGGCTTCGAGATTGCGG GCAAAAGCGATCTCGGGTAACTGTACAGCAGTATCACACCAAGAGTGTGT CGGAAGACTTGGAGAAAGGGCAGAGGGGAGGGGGGCGCACGTTAATCGCA GACAGGACGCCCTGCCCTATGGGAACAATGCTCCACCCGCTCGAGGACGT GGTAAGTGGTCTAGCAGCTAAGGCATGCATACAGCTAATGCGTGCATCCC CCCCCCTCCCCTTCCCCATGTCGTCGCTCTCTCCATGTCTCTCTCTCTTT TCGCCGGAAGTACGACTGCGACGTGTACTGGGAAACCGCATGCCTCTCCG ACGACCGATCGGAGACTCTCGAGGACGCCAAGGGCGTGGCCCCAGGGGCG AAGCTGGCCGTCCTTGACCTGGGATCGTCGGATAGCCTGGAACAAGCGCT GGGGGGTACAATGTGGGAGGTCTCCGCCGGCACGGGAGCAAGGGTTCACT CGGCGTCGTGGGGTTTCATAGACGAGCCTTGCACGGTTGACGAGTCTGCG GTTTCTTTCGACGAATGGGCGTACGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7697:98..4274-

>mRNA_Ecto-sp13_S_contig7697.18928.1 ID=mRNA_Ecto-sp13_S_contig7697.18928.1|Name=mRNA_Ecto-sp13_S_contig7697.18928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1239bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7697:98..4274- (Ectocarpus species13 EcNAP12_S_4_19m)
GTGGCGTCGGAGGAGCGGCGGGGGGCGGGAACGTCGCCGGGGAAGGCCTT
GCGGCGCAACACCGGGGGGGAGGGCTTGGTGGTGCAGGTGCTGCTGTCCC
CAGAAGCCACCGGCAGCAGAGAGAGCGCGCTGGCTTCCCTCGCAGAGAGC
TGGAAGCGAAGCTGGGCGTCGGACTCGTTGAACCTGAGCAGGTTGTCCTT
CTGGTCCGACGCTGACGGCCACCGCCCACGTGAGGCAGACGACGAGCAGG
CTACTCCTCCTCCTCTTATTGCTGCGGATTTCCTGGCCAGAGAGTGGGGC
GGCGCAGCCCGGACGGTGCACGGCCTGGCCGAGCGACTCGGTGGGGTCTC
CCCCGCGGAGGCGTGCGGTTGGAACGGCGTCAGGGTGGCGGCGGAAGGAG
GAGGTCGGTCGTCATCGGCCGGCTGGGTCACCTTGCGCGACATCGGCCAC
CTCCTTCCCGTCGCCGGAAGAGACGACCACGCTCCCCCCCCCCGGCAAGT
TCGTTCTTCGGACACCACCGTCGGAGGCGGCGGCAGCGGTGGCGGCAGAA
ACGGTAACCGTTCGGCAGGGAGTTCCGGCGGCCACCCTGCGTCGGGAGAC
CGTGAGATGGATGACGGCGGTGGTAGCGCTAGCGCCAGCGAGCGAGAGAA
GACGGCGTGTCTGATGGGACTCGTTTCCTTCCTGGCGGCGAGGCCCGAGG
TGGCCAGGGTGTCGGCGCTGCCGAGGGCGGAGCTGTTCAACGCGGTGGCC
GGTCGCATCGTGCAGGGGGGCTCGGCGACGACCCAGCCGATCTGGGACCG
GGGGGGGGACGGGTCGGGAGAGGTGGTCCAGGTGGTCGACTCGGGCATCG
ACGAGGGCTCCTGTTTCTTCAGGGACTCGGCGACTACCCTGGGCCCCGAC
CACGGGTACCTCCGTGACTACGACGGCACCCTCGGGACTGGAGACTACAC
GTATGACCTCTCACAGCGAAAGTACGACTGCGACGTGTACTGGGAAACCG
CATGCCTCTCCGACGACCGATCGGAGACTCTCGAGGACGCCAAGGGCGTG
GCCCCAGGGGCGAAGCTGGCCGTCCTTGACCTGGGATCGTCGGATAGCCT
GGAACAAGCGCTGGGGGGTACAATGTGGGAGGTCTCCGCCGGCACGGGAG
CAAGGGTTCACTCGGCGTCGTGGGGTTTCATAGACGAGCCTTGCACGGTT
GACGAGTCTGCGGTTTCTTTCGACGAATGGGCGTACGAG
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